James P. Hughes

MedicineHealth ProfessionsImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 69 papers. Top paper: “Cabotegravir for the prevention of HIV-1 in women: results from HPTN 084, a phase 3, randomised clinical trial”.

Cabotegravir for the prevention of HIV-1 in women: results from HPTN 084, a phase 3, randomised clinical trial

The Lancet(2022)10.1016/s0140-6736(22)00538-4

N/A

7.4DataRank · unranked

552 citations

James P. Hughes, Peter Bock, Samuel Gurrion Ouma, Portia Hunidzarira, Dishiki Kalonji +95 more

Mobile Texting and Lay Health Supporters to Improve Schizophrenia Care in a Resource-Poor Community in Rural China (LEAN Trial): Randomized Controlled Trial Extended Implementation

Journal of Medical Internet Research(2020)10.2196/22631

N/A

0.946DataRank · unranked

19 citations

Wenjie Gong, Hua He, James P. Hughes, Jane M. Simoni, Shuiyuan Xiao +10 more

The Duration of Pharyngeal Gonorrhea: A Natural History Study

Clinical Infectious Diseases(2021)10.1093/cid/ciab071

N/A

0.614DataRank · unranked

59 citations

Olusegun O. Soge, Christine M. Khosropour, Micaela Haglund, Winnie Wan Yin Yeung, James P. Hughes +2 more

The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters—King County, Washington

The Journal of Infectious Diseases(2022)10.1093/infdis/jiac239

N/A

0.603DataRank · unranked

14 citations

Amanda M. Casto, Pavitra Roychoudhury, Peter D. Han, Hong Xie, Brian Pfau +17 more

Performance of a high-throughput next-generation sequencing method for analysis of HIV drug resistance and viral load

Journal of Antimicrobial Chemotherapy(2020)10.1093/jac/dkaa352

N/A

0.483DataRank · unranked

24 citations

David Bonsall, Vanessa Cummings, Rory Bowden, Tanya Golubchik, Mariateresa de Cesare +12 more

Remote Household Observation for Noninfluenza Respiratory Viral Illness

Clinical Infectious Diseases(2020)10.1093/cid/ciaa1719

N/A

0.477DataRank · unranked

23 citations

Jessica Heimonen, Jessica O’Hanlon, Ashley E. Kim, Naomi Wilcox, Denise J. McCulloch +16 more

Understanding the HIV Epidemic Among MSM in Baltimore: A Modeling Study Estimating the Impact of Past HIV Interventions and Who Acquired and Contributed to Infections

JAIDS Journal of Acquired Immune Deficiency Syndromes(2020)10.1097/qai.0000000000002340

N/A

0.442DataRank · unranked

18 citations

Marie‐Claude Boily, Dobromir Dimitrov, Danielle German, Colin Flynn, Jason E. Farley +10 more

CD101 genetic variants modify regulatory and conventional T cell phenotypes and functions

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100322

N/A

0.406DataRank · unranked

14 citations

Corinne M. Mar, Paurvi Shinde, Feinan Wu, Ting Hong, Evan Greene +47 more

Combining information to estimate adherence in studies of pre‐exposure prophylaxis for HIV prevention: Application to HPTN 067

Statistics in Medicine(2022)10.1002/sim.9321

N/A

0.183DataRank · unranked

2 citations

Brian D. Williamson, Chloe Krakauer, Gordon Chau, B Gutierrez Ortiz, Jon Wakefield +6 more

Inadequate performance of a risk score to predict asymptomaticNeisseria gonorrhoeaeandChlamydia trachomatisinfection among cisgender men who have sex with men

Sexually Transmitted Infections(2023)10.1136/sextrans-2022-055608

N/A

0.165DataRank · unranked

2 citations

James P. Hughes, Christine M. Khosropour, Lisa E. Manhart, Matthew R. Golden, Lindley A. Barbee +1 more

Remote surveillance and detection of SARS-CoV-2 transmission among household members in King County, Washington

BMC Infectious Diseases(2024)10.1186/s12879-024-09160-z

N/A

0.104DataRank · unranked

1 citations

Amanda M. Casto, Jessica Heimonen, Jessica O’Hanlon, Eric J. Chow, Constance Ogokeh +41 more

Venue-Based Recruitment of Women at Elevated Risk for HIV: An HIV Prevention Trials Network Study

UNC Libraries(2020)10.17615/r5ad-nt81

N/A

0DataRank · unranked

0 citations

Sharon Mannheimer, Danielle F. Haley, Malika Roman Isler, James P. Hughes, Irene Kuo +14 more

Economic Resources and HIV Preventive Behaviors Among School-Enrolled Young Women in Rural South Africa (HPTN 068)

UNC Libraries(2020)10.17615/hb0y-dc66

N/A

0DataRank · unranked

0 citations

Audrey Pettifor, Catherine MacPhail, F. Xavier Gómez‐Olivé, The HPTN Study Team, Amanda Selin +5 more

Effect of Schooling on Age-Disparate Relationships and Number of Sexual Partners Among Young Women in Rural South Africa Enrolled in HPTN 068

UNC Libraries(2020)10.17615/tann-k347

N/A

0DataRank · unranked

0 citations

Catherine MacPhail, Jing Wang, William C. Miller, Marie C. D. Stoner, Carolyn Tucker Halpern +9 more

Characteristics of Multiple and Concurrent Partnerships Among Women At High Risk for HIV Infection

UNC Libraries(2020)10.17615/7080-z991

N/A

0DataRank · unranked

0 citations

Wafaa El‐Sadr, Manya Magnus, Adaora A. Adimora, Jessica Justman, Jing Wang +8 more

Analysis of Genetic Linkage of HIV From Couples Enrolled in the HIV Prevention Trials Network 052 Trial

UNC Libraries(2020)10.17615/dbyk-4f31

N/A

0DataRank · unranked

0 citations

Guy de Bruyn, Lei Wang, Suwat Chariyalertsak, Supriya Munshaw, Joseph Makhema +23 more

Regression to the mean and changes in risk behavior following study enrollment in a cohort of U.S. women at risk for HIV

UNC Libraries(2020)10.17615/nez3-tr47

N/A

0DataRank · unranked

0 citations

Carol E. Golin, Adaora A. Adimora, Danielle F. Haley, Sally Hodder, James P. Hughes +5 more

HPTN 068: A Randomized Control Trial of a Conditional Cash Transfer to Reduce HIV Infection in Young Women in South Africa—Study Design and Baseline Results

UNC Libraries(2020)10.17615/tngq-0p52

N/A

0DataRank · unranked

0 citations

Jing Wang, F. Xavier Gómez‐Olivé, Stephen Tollman, James P. Hughes, Wonderful Mabuza +14 more

Treatment as Prevention: Characterization of Partner Infections in the HIV Prevention Trials Network 052 Trial

UNC Libraries(2020)10.17615/g5gg-nq74

N/A

0DataRank · unranked

0 citations

Nehemiah Nhando, Estelle Piwowar‐Manning, Elena Dukhovlinova, Ying Qing Chen, Devin Sabin +28 more

The Relationship between Alcohol Outlets, HIV Risk Behavior, and HSV-2 Infection among South African Young Women: A Cross-Sectional Study

UNC Libraries(2020)10.17615/8e8q-rj62

N/A

0DataRank · unranked

0 citations

Oliver Laeyendecker, Harsha Thirumurthy, F. Xavier Gómez‐Olivé, William C. Miller, Annelies Van Rie +7 more

Characterization of Human Immunodeficiency Virus (HIV) Infections in Women Who Received Injectable Cabotegravir or Tenofovir Disoproxil Fumarate/Emtricitabine for HIV Prevention: HPTN 084

The Journal of Infectious Diseases(2021)10.1093/infdis/jiab576

N/A

0DataRank · unranked

69 citations

Jessica M. Fogel, Estelle Piwowar‐Manning, Gordon Chau, Vanessa Cummings, Yaw Agyei +28 more

The Natural History of Rectal Gonococcal and Chlamydial Infections: The ExGen Study

Clinical Infectious Diseases(2021)10.1093/cid/ciab680

N/A

0DataRank · unranked

33 citations

Christine M. Khosropour, Olusegun O. Soge, James P. Hughes, Micaela Haglund, Winnie Wan Yin Yeung +2 more

Association between bacterial vaginosis and fecundability in Kenyan women planning pregnancies: a prospective preconception cohort study

Human Reproduction(2021)10.1093/humrep/deab002

N/A

0DataRank · unranked

25 citations

Lisa E. Manhart, John Kinuthia, James P. Hughes, Clayton Jisuvei, Khamis Mwinyikai +5 more

A multiview model for relative and absolute microbial abundances

Biometrics(2021)10.1111/biom.13503

N/A

0DataRank · unranked

22 citations

James P. Hughes, Amy D. Willis, Brian D. Williamson

Sample size calculation for active-arm trial with counterfactual incidence based on recency assay

Statistical Communications in Infectious Diseases(2021)10.1515/scid-2020-0009

N/A

0DataRank · unranked

16 citations

David V. Glidden, James P. Hughes, Deborah Donnell, Fei Gao

How Can Progress Toward Ending the Human Immunodeficiency Virus Epidemic in the United States Be Monitored?

Clinical Infectious Diseases(2021)10.1093/cid/ciab976

N/A

0DataRank · unranked

5 citations

Mathieu Maheu‐Giroux, Dobromir Dimitrov, Mia Moore, James P. Hughes, Deborah Donnell +5 more

Bayesian validation framework for dynamic epidemic models

Epidemics(2021)10.1016/j.epidem.2021.100514

N/A

0DataRank · unranked

3 citations

Mia Moore, Dobromir Dimitrov, James P. Hughes, Sayan Dasgupta

Seroprevalence of SARS-CoV-2 antibodies in Seattle, Washington: October 2019–April 2020

PLoS ONE(2021)10.1371/journal.pone.0252235

N/A

0DataRank · unranked

2 citations

Michael L. Jackson, James P. Hughes, Sandra Lester, Lisa Mills, Brandi Freeman +4 more

Prediction‐driven pooled testing methods: Application to HIV treatment monitoring in Rakai, Uganda

Statistics in Medicine(2021)10.1002/sim.9022

N/A

0DataRank · unranked

1 citations

Susanne May, James P. Hughes, Gertrude Nakigozi, Steven J. Reynolds, Erin E. Gabriel +1 more

SARS-CoV-2 Epidemiology on a Public University Campus in Washington State

medRxiv(2021)10.1101/2021.03.15.21253227

N/A

0DataRank · unranked

6 citations

Sarah L Sohlberg, Jessica O’Hanlon, Amanda M. Casto, Anne Emanuels, Natalie Lo +31 more

A Remote Household-Based Approach to Influenza Self-Testing and Antiviral Treatment

medRxiv(2021)10.1101/2021.02.01.21250973

N/A

0DataRank · unranked

1 citations

Denise J. McCulloch, Jessica O’Hanlon, Ashley E. Kim, Anne Emanuels, Naomi Wilcox +14 more

Prior human polyomavirus and papillomavirus infection and incident lung cancer: a nested case–control study

UNC Libraries(2021)10.17615/fk8f-4762

N/A

0DataRank · unranked

0 citations

Noel S. Weiss, Jennifer S. Smith, J. W. S. Carter, You‐Lin Qiao, Stephen E. Hawes +6 more

Analysis of stepped wedge cluster randomized trials in the presence of a time‐varying treatment effect

Statistics in Medicine(2022)10.1002/sim.9511

N/A

0DataRank · unranked

69 citations

Emily C. Voldal, Fan Xia, Patrick J. Heagerty, James P. Hughes, Avi Kenny

Facilitating Next‐Generation Pre‐Exposure Prophylaxis Clinical Trials Using HIV Recent Infection Assays: A Consensus Statement from the Forum HIV Prevention Trial Design Project

Clinical Pharmacology & Therapeutics(2022)10.1002/cpt.2830

N/A

0DataRank · unranked

20 citations

Fei Gao, Eduard Grebe, Amy Cutrell, Moupali Das, Deborah Donnell +9 more

Model misspecification in stepped wedge trials: Random effects for time or treatment

Statistics in Medicine(2022)10.1002/sim.9326

N/A

0DataRank · unranked

14 citations

Fan Xia, Avi Kenny, Patrick J. Heagerty, James P. Hughes, Emily C. Voldal

Estimating benefits of using on-demand oral prep by MSM: a comparative modeling study of the US and Thailand

EClinicalMedicine(2022)10.1016/j.eclinm.2022.101776

N/A

0DataRank · unranked

14 citations

Mia Moore, Marie‐Claude Boily, James P. Hughes, Deborah Donnell, Dobromir Dimitrov +1 more

The impact of stigma and sexual identity on PrEP awareness and use among at-risk men who have sex with men in four U.S. cities (HPTN 078).

Stigma and Health(2022)10.1037/sah0000413

N/A

0DataRank · unranked

10 citations

Geetha Beuchamp, Alanna Bergman, James P. Hughes, D. Scott Batey, Carlos del Rı́o +6 more

The Pediatric Guideline Adherence and Outcomes (PEGASUS Argentina) program in severe traumatic brain injury: study protocol adaptations during the COVID-19 pandemic for a multisite implementation-effectiveness cluster randomized controlled trial

Trials(2022)10.1186/s13063-022-06938-x

N/A

0DataRank · unranked

2 citations

Brianna Mills, Silvia Lujan, Gustavo Petroni, Michael J. Bell, Nahuel Guadagnoli +32 more

Prior Exposure to Azithromycin and Azithromycin Resistance Among Persons Diagnosed With Neisseria gonorrhoeae Infection at a Sexual Health Clinic: 2012–2019

Clinical Infectious Diseases(2022)10.1093/cid/ciac682

N/A

0DataRank · unranked

8 citations

Olusegun O. Soge, James P. Hughes, Anna Berzkalns, Christina Thibault, Roxanne P. Kerani +5 more

Residual Effect of Texting to Promote Medication Adherence for Villagers with Schizophrenia in China: 18-Month Follow-up Survey After the Randomized Controlled Trial Discontinuation

JMIR mhealth and uhealth(2022)10.2196/33628

N/A

0DataRank · unranked

6 citations

Wenjie Gong, Wenjun He, Hua He, James P. Hughes, Jane M. Simoni +10 more

Home-based HIV Testing for Children: A Useful Complement for Caregivers with More Children, Who are Male, and with an HIV Negative Partner

AIDS and Behavior(2022)10.1007/s10461-022-03643-3

N/A

0DataRank · unranked

4 citations

Cyrus Mugo, Vincent O. Omondi, Irene Njuguna, Elizabeth Maleche‐Obimbo, Irene Inwani +6 more

Diverging Neisseria gonorrhoeae Morbidity in Non-Hispanic Black and White Females: Application of Group-Based Trajectory Modeling to Trends in County-Level Morbidity 2003–2018

Journal of Urban Health(2022)10.1007/s11524-022-00702-x

N/A

0DataRank · unranked

2 citations

James P. Hughes, Mark Stenger, Christine M. Khosropour, Matthew R. Golden, Emily Rowlinson

Cultivable vaginal Lactobacillus is not associated with fecundability in Kenyan women attempting to conceive

Fertility and Sterility(2022)10.1016/j.fertnstert.2021.11.032

N/A

0DataRank · unranked

1 citations

Clayton Jisuvei, James P. Hughes, Kishor Mandaliya, Lisa E. Manhart, Khamis Mwinyikai +5 more

SARS-CoV-2 Screening Testing in Schools: A Comparison of School- Vs. Home-Based Collection Methods

Journal of the Pediatric Infectious Diseases Society(2022)10.1093/jpids/piac097

N/A

0DataRank · unranked

1 citations

Ariana Magedson, Anne Emanuels, Kyle G Luiten, Brian Pfau, Melissa Truong +10 more

Remote Surveillance and Detection of SARS-CoV-2 Transmission Among Household Members in King County, Washington

Research Square(2022)10.21203/rs.3.rs-2355623/v1

N/A

0DataRank · unranked

0 citations

Anne Emanuels, Amanda M. Casto, Jessica Heimonen, Jessica O’Hanlon, Eric J. Chow +11 more

Impact of differentiated service delivery models on 12-month retention in HIV treatment in Mozambique: an interrupted time-series analysis

The Lancet HIV(2023)10.1016/s2352-3018(23)00184-4

N/A

0DataRank · unranked

16 citations

Orvalho Augusto, James P. Hughes, Onei Uetela, Eduardo Samo Gudo, Sérgio Chicumbe +8 more

Counterfactual estimation of efficacy against placebo for novel PrEP agents using external trial data: example of injectable cabotegravir and oral PrEP in women

Journal of the International AIDS Society(2023)10.1002/jia2.26118

N/A

0DataRank · unranked

11 citations

Fei Gao, James P. Hughes, Brett Hanscom, Lawrence Corey, Myron S. Cohen +9 more

Sample Size Calculations for Stepped Wedge Designs with Treatment Effects that May Change with the Duration of Time under Intervention

Prevention Science(2023)10.1007/s11121-023-01587-1

N/A

0DataRank · unranked

10 citations

Wen-Yu Lee, Andrea B. Troxel, Patrick J. Heagerty, James P. Hughes

Risk of Subsequent Respiratory Virus Detection After Primary Virus Detection in a Community Household Study—King County, Washington, 2019–2021

The Journal of Infectious Diseases(2023)10.1093/infdis/jiad305

N/A

0DataRank · unranked

5 citations

Eric J. Chow, Yongzhe Wang, James P. Hughes, Julia H. Rogers, Anne Emanuels +11 more

Adjusting for Incomplete Baseline Covariates in Randomized Controlled Trials: A Cross-World Imputation Framework

arXiv (Cornell University)(2023)10.48550/arxiv.2302.01269

N/A

0DataRank · unranked

0 citations

James P. Hughes, Ting Ye, Yilin Song

Assessing the use of surveillance data to estimate the impact of prevention interventions on HIV incidence in cluster-randomized controlled trials

UNC Libraries(2023)10.17615/k20w-cp48

N/A

0DataRank · unranked

0 citations

Eric Vittinghoff, Megan Moore, Chris Beyrer, Myron S. Cohen, James P. Hughes +5 more

Post-traumatic stress disorder symptoms and mental health over time among low-income women at increased risk of HIV in the U.S

UNC Libraries(2023)10.17615/djv9-0s68

N/A

0DataRank · unranked

0 citations

Aet O’Leary, J. Wang, Jessica Justman, C.E. Golin, A.A. Adimora +5 more

Efficacy of the Dapivirine Vaginal Ring Accounting for Imperfect Adherence

AIDS and Behavior(2024)10.1007/s10461-024-04463-3

N/A

0DataRank · unranked

3 citations

Renee Heffron, James P. Hughes, Barbra A. Richardson, Ariane van der Straten, Thesla Palanee‐Phillips +12 more

Adjusting for incomplete baseline covariates in randomized controlled trials: a cross-world imputation framework

Biometrics(2024)10.1093/biomtc/ujae094

N/A

0DataRank · unranked

5 citations

James P. Hughes, Ting Ye, Yilin Song

Absenteeism and Health Behavior Trends Associated With Acute Respiratory Illness Before and During the COVID-19 Pandemic in a Community Household Cohort, King County, Washington

AJPM Focus(2024)10.1016/j.focus.2024.100248

N/A

0DataRank · unranked

1 citations

Yongzhe Wang, Eric J. Chow, Anne Emanuels, Jessica Heimonen, Constance Ogokeh +9 more

Correction: Sample Size Calculations for Stepped Wedge Designs with Treatment Effects that May Change with the Duration of Time under Intervention

Prevention Science(2024)10.1007/s11121-024-01652-3

N/A

0DataRank · unranked

0 citations

Wen-Yu Lee, Andrea B. Troxel, Patrick J. Heagerty, James P. Hughes

Robust analysis of stepped wedge trials using composite likelihood models

Statistics in Medicine(2024)10.1002/sim.10120

N/A

0DataRank · unranked

0 citations

Avi Kenny, Fan Xia, Patrick J. Heagerty, James P. Hughes, Emily C. Voldal

Urethral Microbiota in Men: Association of Haemophilus influenzae and Mycoplasma penetrans With Nongonococcal Urethritis

Clinical Infectious Diseases(2020)10.1093/cid/ciaa1123

N/A

0DataRank · unranked

64 citations

Laura C. Chambers, Kenneth Tapia, Noah G. Hoffman, Matthew M Munch, Jennifer L. L. Morgan +11 more

Counterfactual estimation of efficacy against placebo for novel PrEP agents using external trial data: example of injectable cabotegravir and oral PrEP in women

UNC Libraries(2025)10.17615/8kk4-f682

N/A

0DataRank · unranked

0 citations

Jared M. Baeten, Deborah Donnell, Glenda Gray, Linda‐Gail Bekker, Srilatha Edupuganti +9 more

Human Immunodeficiency Virus Is Associated With Higher Levels of Systemic Inflammation Among Kenyan Adults Despite Viral Suppression

Clinical Infectious Diseases(2020)10.1093/cid/ciaa1650

N/A

0DataRank · unranked

21 citations

Stephanie T. Page, Stephen J. Polyak, John Kinuthia, Alfred Osoti, Fredrick Otieno +13 more

Extending the I-squared statistic to describe treatment effect heterogeneity in cluster, multi-centre randomized trials and individual patient data meta-analysis

Statistical Methods in Medical Research(2020)10.1177/0962280220948550

N/A

0DataRank · unranked

18 citations

James P. Hughes, Joanne E. McKenzie, Andrew Forbes, Karla Hemming

Metabolic syndrome and 10-year cardiovascular risk among HIV-positive and HIV-negative adults

Medicine(2020)10.1097/md.0000000000020845

N/A

0DataRank · unranked

39 citations

Stephanie T. Page, John Kinuthia, Alfred Osoti, Stephen J. Polyak, Fredrick Otieno +9 more

Retention Strategies and Factors Associated with Missed Visits Among Low Income Women at Increased Risk of HIV Acquisition in the US (HPTN 064)

UNC Libraries(2020)10.17615/v495-8v82

N/A

0DataRank · unranked

3 citations

Sally Hodder, Wafaa El‐Sadr, Christopher Chauncey Watson, Anne Rompalo, Carol E. Golin +12 more

Substance use patterns and factors associated with changes over time in a cohort of heterosexual women at risk for HIV acquisition in the United States

UNC Libraries(2020)10.17615/wy8t-qj86

N/A

0DataRank · unranked

1 citations

James P. Hughes, Irene Kuo, Adaora A. Adimora, Paula M. Frew, Jing Wang +7 more

Assessing the use of surveillance data to estimate the impact of prevention interventions on HIV incidence in cluster-randomized controlled trials

Epidemics(2020)10.1016/j.epidem.2020.100423

N/A

0DataRank · unranked

1 citations

Dobromir Dimitrov, James P. Hughes, Mia Moore, Eric Vittinghoff, Albert Liu +5 more

Sexual Partner Types and Incident HIV Infection among Rural South African Adolescent Girls and Young Women Enrolled in HPTN 068: A Latent Class Analysis

UNC Libraries(2020)10.17615/0np9-3t54

N/A

0DataRank · unranked

0 citations

James P. Hughes, Kathleen Kahn, Rhian Twine, Catherine MacPhail, Audrey Pettifor +7 more

Relationship Between Community-Level Alcohol Outlet Accessibility and Individual-Level Herpes Simplex Virus Type 2 Infection Among Young Women in South Africa

UNC Libraries(2020)10.17615/w6sv-4727

N/A

0DataRank · unranked

0 citations

Stephen Tollman, Molly Rosenberg, Audrey Pettifor, Harsha Thirumurthy, Michael Emch +7 more

The effect of a conditional cash transfer on HIV incidence in young women in rural South Africa (HPTN 068): a phase 3, randomised controlled trial

UNC Libraries(2020)10.17615/rem0-jq49

N/A

0DataRank · unranked

0 citations

Amanda Selin, P. Andrew, Oliver Laeyendecker, Immitrude Mokoena, F. Xavier Gómez‐Olivé +14 more

Absence of an association of human polyomavirus and papillomavirus infection with lung cancer in China: a nested case–control study

UNC Libraries(2020)10.17615/bcsq-9t25

N/A

0DataRank · unranked

0 citations

Joseph J. Carter, You‐Lin Qiao, James P. Hughes, Lisa E. Manhart, Denise A. Galloway +5 more