Eric J. Rubin

Environmental ScienceMedicineSocial Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 44 papers. Top paper: “A tRNA modification in Mycobacterium tuberculosis facilitates optimal intracellular growth”.

A tRNA modification in Mycobacterium tuberculosis facilitates optimal intracellular growth

eLife(2023)10.7554/elife.87146

N/A

0.600DataRank · unranked

20 citations

Satoshi Kimura, Eric J. Rubin, Matthew K. Waldor, Francesca G. Tomasi

Inflammation unites diverse acute and chronic diseases

European Journal of Clinical Investigation(2024)10.1111/eci.14280

N/A

0.550DataRank · unranked

38 citations

Robin D. Smith, Eric J. Rubin, Marilyn K. Glassberg, Michael E. Farkouh, Robert S. Rosenson +1 more

Fluorogenic Probes of the Mycobacterial Membrane as Reporters of Antibiotic Action

Journal of the American Chemical Society(2024)10.1021/jacs.4c00617

N/A

0.470DataRank · unranked

22 citations

Charles L. Dulberger, Theodore C. Warner, Robert A. Brown, Alexander Sturm, Eveline Ultee +9 more

Modeling Site-Specific Nucleotide Biases Affecting Himar1 Transposon Insertion Frequencies in TnSeq Data Sets

mSystems(2021)10.1128/msystems.00876-21

N/A

0.406DataRank · unranked

14 citations

A. J. P. Brown, Chidiebere Akusobi, Eric J. Rubin, Christopher M. Sassetti, Thomas R. Ioerger +1 more

Mutation rates and adaptive variation among the clinically dominant clusters of Mycobacterium abscessus

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2302033120

N/A

0.406DataRank · unranked

14 citations

Mark R. Sullivan, Kerry McGowen, Evan M. Koch, Eric J. Rubin, Maha R. Farhat +1 more

Chemical-genetic interaction mapping links carbon metabolism and cell wall structure to tuberculosis drug efficacy

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.08.439092

N/A

0.165DataRank · unranked

2 citations

Peter O. Oluoch, Nadine Ruecker, Megan K. Proulx, Vijay Soni, Kenan C. Murphy +19 more

Genetically encoded transcriptional plasticity underlies stress adaptation in Mycobacterium tuberculosis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.20.553992

N/A

0.165DataRank · unranked

2 citations

Junhao Zhu, Peter H. Culviner, Eric J. Rubin, Sarah M. Fortune, Qian Gao +2 more

Genetically encoded transcriptional plasticity underlies stress adaptation in Mycobacterium tuberculosis

Research Square(2023)10.21203/rs.3.rs-3303807/v1

N/A

0.104DataRank · unranked

1 citations

Cheng Bei, Junhao Zhu, Peter H. Culviner, Eric J. Rubin, Sarah M. Fortune +2 more

Spatiotemporal localization of proteins in mycobacteria

Cell Reports(2021)10.1016/j.celrep.2021.110154

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0DataRank · unranked

38 citations

Ian D. Wolf, Charles L. Dulberger, Harim I. Won, Jemila C. Kester, Julius Judd +10 more

6-Fluorophenylbenzohydrazides inhibit Mycobacterium tuberculosis growth through alteration of tryptophan biosynthesis

European Journal of Medicinal Chemistry(2021)10.1016/j.ejmech.2021.113843

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0DataRank · unranked

3 citations

G Venditti, Junhao Zhu, Helena I. Boshoff, Kriti Arora, Alessandro De Logu +5 more

Modeling site-specific nucleotide biases affecting Himar1 transposon insertion frequencies in TnSeq datasets

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.01.450749

N/A

0DataRank · unranked

7 citations

A. J. P. Brown, Chidiebere Akusobi, Eric J. Rubin, Christopher M. Sassetti, Thomas R. Ioerger +1 more

High-density transposon mutagenesis in Mycobacterium abscessus identifies an essential penicillin-binding lipo-protein (PBP-lipo) involved in septal peptidoglycan synthesis and antibiotic sensitivity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.01.450732

N/A

0DataRank · unranked

4 citations

Bouchra S. Benghomari, Junhao Zhu, Ian D. Wolf, Shreya Singhvi, Charles L. Dulberger +3 more

A tRNA-acetylating toxin and detoxifying enzyme in Mycobacterium tuberculosis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.20.473312

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0DataRank · unranked

1 citations

Alexander M. J. Hall, Jessica T. P. Schweber, Charles L. Dulberger, Kerry McGowen, Qingyun Liu +4 more

Anti-tuberculosis treatment strategies and drug development: challenges and priorities

Nature Reviews Microbiology(2022)10.1038/s41579-022-00731-y

N/A

0DataRank · unranked

479 citations

Eric J. Rubin, Véronique Dartois

Failing upwards: Genetics-based strategies to improve antibiotic discovery and efficacy in Mycobacterium tuberculosis

Frontiers in Cellular and Infection Microbiology(2022)10.3389/fcimb.2022.932556

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0DataRank · unranked

7 citations

Eric J. Rubin, Francesca G. Tomasi

Tuberculosis treatment failure associated with evolution of antibiotic resilience

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.29.486233

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0DataRank · unranked

14 citations

Junhao Zhu, Charles L. Dulberger, Sydney Stanley, Sean Wilson, Eun Seon Chung +12 more

Mutation rates and adaptive variation among the clinically dominant clusters of Mycobacterium abscessus

Research Square(2022)10.21203/rs.3.rs-1620528/v1

N/A

0DataRank · unranked

2 citations

Mark R. Sullivan, Kerry McGowen, Evan M. Koch, Eric J. Rubin, Maha R. Farhat +1 more

Mutation rates and adaptive variation among the clinically dominant clusters of Mycobacterium abscessus

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.27.489597

N/A

0DataRank · unranked

1 citations

Mark R. Sullivan, Kerry McGowen, Evan M. Koch, Eric J. Rubin, Maha R. Farhat +1 more

Biotin-dependent cell envelope remodelling is required for Mycobacterium abscessus survival in lung infection

Nature Microbiology(2023)10.1038/s41564-022-01307-5

N/A

0DataRank · unranked

30 citations

Kerry McGowen, Qiang Liu, Chidiebere Akusobi, David C. Young, Jacob A. Mayfield +7 more

Mycobacterial nucleoid-associated protein Lsr2 is required for productive mycobacteriophage infection

Nature Microbiology(2023)10.1038/s41564-023-01333-x

N/A

0DataRank · unranked

28 citations

Carlos A. Guerrero-Bustamante, Siân V. Owen, Sean Wilson, Michael Wuo, Rebecca A. Garlena +11 more

A MAPS Vaccine Induces Multipronged Systemic and Tissue-Resident Cellular Responses and Protects Mice against Mycobacterium tuberculosis

mBio(2023)10.1128/mbio.03611-22

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0DataRank · unranked

17 citations

Shoko Wakabayashi, Noman Siddiqi, Elaine Cheung, Gregory H. Babunovic, Claudette M. Thompson +5 more

Unusual prophages in Mycobacterium abscessus genomes and strain variations in phage susceptibilities

PLoS ONE(2023)10.1371/journal.pone.0281769

N/A

0DataRank · unranked

11 citations

Rebekah M. Dedrick, Rebecca A. Garlena, Daniel A. Russell, Christian H. Gauthier, Haley G. Aull +6 more

Development of an Engineered Mycobacterium tuberculosis Strain for a Safe and Effective Tuberculosis Human Challenge Model

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.19.567569

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0DataRank · unranked

5 citations

Hong-Wei Su, Joshua B. Wallach, Jeffrey C. Wagner, Benjamin J. Braunecker, Michelle Gardner +19 more

Chemically-induced targeted protein degradation in mycobacteria uncovers antibacterial effects and potentiates antibiotic efficacy

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.14.528552

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0DataRank · unranked

2 citations

Junhao Zhu, Olga Kandror, Tatos Akopian, Ian D. Wolf, Michael C. Chao +3 more

A tRNA modification in Mycobacterium tuberculosis facilitates optimal intracellular growth

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.20.529267

N/A

0DataRank · unranked

0 citations

Satoshi Kimura, Eric J. Rubin, Matthew K. Waldor, Francesca G. Tomasi

A tRNA modification in Mycobacterium tuberculosis facilitates optimal intracellular growth

(2023)10.7554/elife.87146.1

N/A

0DataRank · unranked

0 citations

Satoshi Kimura, Eric J. Rubin, Matthew K. Waldor, Francesca G. Tomasi

Targeted protein degradation in mycobacteria uncovers antibacterial effects and potentiates antibiotic efficacy

Nature Communications(2024)10.1038/s41467-024-48506-8

N/A

0DataRank · unranked

21 citations

Samuel Zinga, Olga Kandror, Tatos Akopian, Ian D. Wolf, Jessica T. P. Schweber +6 more

Transposon-sequencing across multiple Mycobacterium abscessus isolates reveals significant functional genomic diversity among strains

mBio(2024)10.1128/mbio.03376-24

N/A

0DataRank · unranked

11 citations

Sanjeevani Choudhery, Bouchra S. Benghomari, Ian D. Wolf, Shreya Singhvi, Thomas R. Ioerger +2 more

Efflux pumps and membrane permeability contribute to intrinsic antibiotic resistance in Mycobacterium abscessus

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.23.609441

N/A

0DataRank · unranked

6 citations

Tobias Funck, Xin Wang, Samuel Zinga, Ian D. Wolf, Chidiebere Akusobi +4 more

Deep learning-based prediction of chemical accumulation in a pathogenic mycobacterium

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.15.628588

N/A

0DataRank · unranked

4 citations

Eric J. Rubin, Mark R. Sullivan

Engineered Mycobacterium tuberculosis triple-kill-switch strain provides controlled tuberculosis infection in animal models

Nature Microbiology(2025)10.1038/s41564-024-01913-5

N/A

0DataRank · unranked

19 citations

Hong-Wei Su, Joshua B. Wallach, Jeffrey C. Wagner, Benjamin J. Braunecker, Michelle Gardner +20 more

Exploring β-lactam interactions with DacB1: unraveling optimal therapies for combating drug-resistant Mycobacterium tuberculosis

mBio(2025)10.1128/mbio.01372-25

N/A

0DataRank · unranked

2 citations

David C. Nguyen, Eunjeong Shin, Christopher R. Bethel, Magdalena A. Taracila, Khalid M Dousa +9 more

Validating Conditionally Essential Targets: Discovery of the First Orally Effective Biotin Inhibitor against Mycobacterium Tuberculosis

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.24.678246

N/A

0DataRank · unranked

2 citations

Joshua B. Wallach, Yahani P. Jayasinghe, Mark R. Sullivan, Julianna Proietto, Suyapa Rodriguez +14 more

Predatory journals: what can we do to protect their prey?

New Zealand Medical Journal(2025)10.26635/6965.e1608

N/A

0DataRank · unranked

0 citations

Diane Babski, Vivienne C. Bachelet, Till W. Bärnighausen, Christopher Baethge, Kirsten Bibbins‐Domingo +11 more

RNA polymerase-mediated regulation of intrinsic antibiotic resistance and bacterial cell division

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.20.665812

N/A

0DataRank · unranked

0 citations

Junhao Zhu, Yesha Patel, John D. Helmann, Eric J. Rubin, Kyu Y. Rhee +1 more

Diagnosing and Treating Systemic Racism

New England Journal of Medicine(2020)10.1056/nejme2021693

N/A

0DataRank · unranked

193 citations

Lisa Rosenbaum, Debra Malina, Stephen Morrissey, Eric J. Rubin, Michele K. Evans

Ribosomal protection as a linezolid resistance mechanism in Mycobacterium abscessus

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.24.684387

N/A

0DataRank · unranked

0 citations

Kerry McGowen, Mark R. Sullivan, Samuel Zinga, Ian D. Wolf, Dennis Nurjadi +3 more

Pyrazinamide triggers degradation of its target aspartate decarboxylase

Nature Communications(2020)10.1038/s41467-020-15516-1

N/A

0DataRank · unranked

122 citations

Jickky Palmae Sarathy, Michelle Yee, Priya Ragunathan, Joon Shin, Shashi Bhushan +10 more

Aspartate aminotransferase Rv3722c governs aspartate-dependent nitrogen metabolism in Mycobacterium tuberculosis

Nature Communications(2020)10.1038/s41467-020-15876-8

N/A

0DataRank · unranked

74 citations

Lungelo Mandyoli, Ryan Hughes, Shoko Wakabayashi, Jessica T. Pinkham, Bruna P. Selbach +5 more

Protective efficacy of an attenuated Mtb ΔLprG vaccine in mice

PLoS Pathogens(2020)10.1371/journal.ppat.1009096

N/A

0DataRank · unranked

22 citations

Eryn Blass, Jingyou Yu, Malika Aïd, Shant H. Mahrokhian, Sara Cohen +11 more

Prophage-encoded phage defense proteins with cognate self-immunity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.13.199331

N/A

0DataRank · unranked

15 citations

Nicolas Wenner, Charles L. Dulberger, Ella V. Rodwell, Arthur Bowers-Barnard, Natalia Quinones-Olvera +6 more

Next-Generation High-Throughput Functional Annotation of Microbial Genomes

UNC Libraries(2020)10.17615/c2pt-0t39

N/A

0DataRank · unranked

0 citations

Sean Crosson, Ralph S. Baric, Blossom Damania, Eric J. Rubin, Samuel I. Miller

Prophages encode phage-defense systems with cognate self-immunity

Cell Host & Microbe(2021)10.1016/j.chom.2021.09.002

N/A

0DataRank · unranked

137 citations

Nicolas Wenner, Charles L. Dulberger, Ella V. Rodwell, Arthur Bowers-Barnard, Natalia Quinones-Olvera +6 more

The Tuberculosis Drug Accelerator at year 10: what have we learned?

Nature Medicine(2021)10.1038/s41591-021-01442-2

N/A

0DataRank · unranked

62 citations

David Barros-Aguirre, Clifton E. Barry, Robert H. Bates, Steven J. Berthel, Helena I. Boshoff +32 more