🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Zachary B. Abrams

Washington University in St. Louis

ORCID: 0000-0001-5219-9996

Also affiliated with Biomedical Research Networking Center on Neurodegenerative Diseases

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile
0.512Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

RCytoGPS: an R package for reading and visualizing cytogenetics data

Bioinformatics(2021)10.1093/bioinformatics/btab683
Top 38%
0.512DataRank
Top 38%5 citations

Dwayne G. Tally, Lynne V. Abruzzo, Kevin R. Coombes, Zachary B. Abrams

Papers

Driven by 9 papers — median percentile 62. Top paper: “Spatial cell type composition in normal and Alzheimers human brains is revealed using integrated mouse and human single cell RNA sequencing”.

Spatial cell type composition in normal and Alzheimers human brains is revealed using integrated mouse and human single cell RNA sequencing

Scientific Reports(2020)10.1038/s41598-020-74917-w
N/A
0.835DataRank · unranked
21 citations

Shunian Xiang, Bryan R. Helm, Zachary B. Abrams, Peter Neidecker, Raghu Machiraju +4 more

RCytoGPS: an R package for reading and visualizing cytogenetics data

Bioinformatics(2021)10.1093/bioinformatics/btab683
Top 38%
0.512DataRank
Top 38%5 citations

Dwayne G. Tally, Lynne V. Abruzzo, Kevin R. Coombes, Zachary B. Abrams

RCytoGPS: An R Package for Reading and Visualizing Cytogenetics Data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.16.389791
N/A
0DataRank · unranked
0 citations

Dwayne G. Tally, Lynne V. Abruzzo, Kevin R. Coombes, Zachary B. Abrams

Leveraging GPT-4 for Identifying Cancer Phenotypes in Electronic Health Records: A Performance Comparison between GPT-4, GPT-3.5-turbo, Flan-T5 and spaCy’s Rule-based & Machine Learning-based methods

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.27.559788
N/A
0DataRank · unranked
8 citations

Inez Y. Oh, Jonathan Moran Sierra, Jonathan Tang, Philip Payne, Zachary B. Abrams +2 more

SillyPutty: Improved clustering by optimizing the silhouette width

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.07.566055
N/A
0DataRank · unranked
2 citations

Dwayne G. Tally, Zachary B. Abrams, Kevin R. Coombes, Polina Bombina

Transcriptome Complexity Disentangled: A Regulatory Molecules Approach

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.17.537241
N/A
0DataRank · unranked
1 citations

Zachary B. Abrams, Heather H. Pua, Kevin R. Coombes, Amir Asiaee

CeRTS: certainty retrieval token search in large language model clinical information extraction

Journal of Biomedical Informatics(2025)10.1016/j.jbi.2025.104900
N/A
0DataRank · unranked
2 citations

Kriti Bhattarai, Inez Y. Oh, Jake Lever, Obi L. Griffith, Malachi Griffith +3 more

Transcriptome Complexity Disentangled: A Regulatory Molecules Approach

International Journal of Molecular Sciences(2025)10.3390/ijms26062510
N/A
0DataRank · unranked
0 citations

Zachary B. Abrams, Heather H. Pua, Kevin R. Coombes, Amir Asiaee

Pattern recognition in lymphoid malignancies using CytoGPS and Mercator

BMC Bioinformatics(2021)10.1186/s12859-021-03992-1
N/A
0DataRank · unranked
4 citations

Dwayne G. Tally, Lin Zhang, Caitlin E. Coombes, Philip Payne, Lynne V. Abruzzo +2 more