🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Thomas R. Sibley

Cape Town HVTN Immunology Laboratory / Hutchinson Centre Research Institute of South Africa

ORCID: 0000-0001-5269-2297

Also affiliated with Infectious Disease Research Institute, Fred Hutch Cancer Center

MedicineMathematics

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 12 papers. Top paper: “Impacts of human mobility on the citywide transmission dynamics of 18 respiratory viruses in pre- and post-COVID-19 pandemic years”.

Impacts of human mobility on the citywide transmission dynamics of 18 respiratory viruses in pre- and post-COVID-19 pandemic years

Nature Communications(2024)10.1038/s41467-024-48528-2
N/A
0.598DataRank · unranked
53 citations

C. Hansen, Roy Burstein, Shanda Boyle, Robin Prentice, Cooper Marshall +25 more

Interactions among 17 respiratory pathogens: a cross-sectional study using clinical and community surveillance data

medRxiv(2022)10.1101/2022.02.04.22270474
N/A
0.457DataRank · unranked
20 citations

Benjamin M. Althouse, Amanda Adler, Adam Akullian, Elizabeth Brandstetter, Shari Cho +30 more

Remote surveillance and detection of SARS-CoV-2 transmission among household members in King County, Washington

BMC Infectious Diseases(2024)10.1186/s12879-024-09160-z
N/A
0.104DataRank · unranked
1 citations

Amanda M. Casto, Jessica Heimonen, Jessica O’Hanlon, Eric J. Chow, Constance Ogokeh +41 more

Ten Recommendations for Supporting Open Pathogen Genomic Analysis in Public Health Settings

Preprints.org(2020)10.20944/preprints202001.0107.v1
N/A
0DataRank · unranked
4 citations

Duncan MacCannell, Thomas R. Sibley, Trevor Bedford, Allison Black

Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens

The Journal of Open Source Software(2021)10.21105/joss.02906
N/A
0DataRank · unranked
273 citations

James Hadfield, Thomas R. Sibley, Jover Lee, Kairsten Fay, Misja Ilcisin +5 more

Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State

Science Translational Medicine(2021)10.1126/scitranslmed.abf0202
N/A
0DataRank · unranked
80 citations

Cassia Wagner, Chris Frazar, Pavitra Roychoudhury, Jover Lee, Louise H. Moncla +38 more

Cryptic transmission of SARS-CoV-2 in Washington state

Science(2020)10.1126/science.abc0523
N/A
0DataRank · unranked
329 citations

Alexander L. Greninger, Pavitra Roychoudhury, Lea M. Starita, Michael Famulare, Meei‐Li Huang +62 more

Joint visualization of seasonal influenza serology and phylogeny to inform vaccine composition

Frontiers in Bioinformatics(2023)10.3389/fbinf.2023.1069487
N/A
0DataRank · unranked
9 citations

James Hadfield, Allison Black, Thomas R. Sibley, Richard A. Neher, Trevor Bedford +2 more

Human mobility impacts the transmission of common respiratory viruses: A modeling study of the Seattle metropolitan area

medRxiv(2023)10.1101/2023.10.31.23297868
N/A
0DataRank · unranked
2 citations

C. Hansen, Roy Burstein, Shanda Boyle, Robin Prentice, Cooper Marshall +25 more

SARS-CoV-2 Epidemiology on a Public University Campus in Washington State

medRxiv(2021)10.1101/2021.03.15.21253227
N/A
0DataRank · unranked
6 citations

Sarah L Sohlberg, Jessica O’Hanlon, Amanda M. Casto, Anne Emanuels, Natalie Lo +31 more

Ten recommendations for supporting open pathogen genomic analysis in public health

Nature Medicine(2020)10.1038/s41591-020-0935-z
N/A
0DataRank · unranked
122 citations

Duncan MacCannell, Thomas R. Sibley, Trevor Bedford, Allison Black

Cryptic transmission of SARS-CoV-2 in Washington State

medRxiv(2020)10.1101/2020.04.02.20051417
N/A
0DataRank · unranked
86 citations

Alexander L. Greninger, Pavitra Roychoudhury, Lea M. Starita, Michael Famulare, Meei‐Li Huang +52 more