🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Michael Y. Gerner

University of Washington

ORCID: 0000-0001-5406-8308

Also affiliated with Seattle University

Immunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile
0.487Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The IBEX Knowledge-Base: A central resource for multiplexed imaging techniques

PLoS Biology(2025)10.1371/journal.pbio.3003070
Top 63%
0.214DataRank
Top 63%3 citations

Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner +57 more

Papers

Driven by 25 papers — median percentile 33. Top paper: “CytoMAP: A Spatial Analysis Toolbox Reveals Features of Myeloid Cell Organization in Lymphoid Tissues”.

CytoMAP: A Spatial Analysis Toolbox Reveals Features of Myeloid Cell Organization in Lymphoid Tissues

Cell Reports(2020)10.1016/j.celrep.2020.107523
N/A
0.837DataRank · unranked
264 citations

Jakub Filipek, Benjamin H. Gern, Brandy Olin, Joseph M. Leal, Yajun Wu +9 more

Innate cell microenvironments in lymph nodes shape the generation of T cell responses during type I inflammation

Science Immunology(2021)10.1126/sciimmunol.abb9435
N/A
0.706DataRank · unranked
110 citations

Jessica Huang, Karan Kohli, Caleb Stoltzfus, Miranda R. Lyons‐Cohen, Brandy Olin +3 more

Multi-Parameter Quantitative Imaging of Tumor Microenvironments Reveals Perivascular Immune Niches Associated With Anti-Tumor Immunity

Frontiers in Immunology(2021)10.3389/fimmu.2021.726492
N/A
0.590DataRank · unranked
50 citations

Ramya Sivakumar, Leo Kunz, Brandy Olin, Elena Menietti, Dario Speziale +6 more

Host and pathogen genetic diversity shape vaccine-mediated protection to Mycobacterium tuberculosis

Frontiers in Immunology(2024)10.3389/fimmu.2024.1427846
N/A
0.406DataRank · unranked
14 citations

Courtney R. Plumlee, Lindsay Engels, Dat Mai, Tara A. Murray, Ana N. Jahn +13 more

A hybrid open-top light-sheet microscope for multi-scale imaging of cleared tissues

Research Square(2021)10.21203/rs.3.rs-860253/v1
N/A
0.360DataRank · unranked
10 citations

Kevin W. Bishop, Lindsey A. Barner, Etsuo A. Susaki, Shimpei I. Kubota, Gan Gao +32 more

Blunting specific T-dependent antibody responses with engineered “decoy” B cells

Molecular Therapy(2024)10.1016/j.ymthe.2024.08.023
N/A
0.241DataRank · unranked
4 citations

Jaime Chao, Noelle Dahl, Mengni Fan, Xiaohe Cai, Nathan G Avery +7 more

The IBEX Knowledge-Base: A central resource for multiplexed imaging techniques

PLoS Biology(2025)10.1371/journal.pbio.3003070
Top 63%
0.214DataRank
Top 63%3 citations

Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner +57 more

The IBEX knowledge-base a community resource enabling adoption and development of immunofluorescence imaging methods

eLife(2025)10.7554/elife.105737
Top 67%
0.169DataRank
Top 67%2 citations

Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner +57 more

The IBEX Knowledge-Base: Achieving more together with open science

PubMed(2024)10.48550/arxiv.2407.19059
Top 78%
0.104DataRank
Top 78%1 citations

Ifeanyichukwu U. Anidi, Leanne Arakkal, Armando Arroyo-Mejías, Rebecca T. Beuschel, Katy Börner +53 more

A hybrid open-top light-sheet microscope for versatile multi-scale imaging of cleared tissues

Nature Methods(2022)10.1038/s41592-022-01468-5
N/A
0DataRank · unranked
178 citations

Kevin W. Bishop, Lindsey A. Barner, Etsuo A. Susaki, Shimpei I. Kubota, Gan Gao +32 more

Prolonged T cell – DC macro-clustering within lymph node microenvironments initiates Th2 cell differentiation in a site-specific manner

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.07.547554
N/A
0DataRank · unranked
2 citations

Elya A. Shamskhou, Michael Y. Gerner, Miranda R. Lyons‐Cohen

Site-specific regulation of Th2 differentiation within lymph node microenvironments

The Journal of Experimental Medicine(2024)10.1084/jem.20231282
N/A
0DataRank · unranked
36 citations

Elya A. Shamskhou, Michael Y. Gerner, Miranda R. Lyons‐Cohen

Ultra-low Dose Aerosol Infection of Mice with Mycobacterium tuberculosis More Closely Models Human Tuberculosis

Cell Host & Microbe(2020)10.1016/j.chom.2020.10.003
N/A
0DataRank · unranked
138 citations

Fergal J. Duffy, Benjamin H. Gern, Jared L. Delahaye, Sara Cohen, Caleb Stoltzfus +11 more

Distal Immunization and Systemic Cytokines Establish a Transient Immune Alert State in the Intestine

The Journal of Immunology(2024)10.4049/jimmunol.2400209
N/A
0DataRank · unranked
4 citations

Jessica Huang, Michael T. Conlon, Meera K. Shenoy, Jaime Chao, Ming Yao Chooi +3 more

A hybrid open-top light-sheet microscope for multi-scale imaging of cleared tissues

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.06.081745
N/A
0DataRank · unranked
8 citations

Kevin W. Bishop, Lindsey A. Barner, Etsuo A. Susaki, Shimpei I. Kubota, Gan Gao +32 more

CD4-mediated immunity shapes neutrophil-driven tuberculous pathology

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.12.589315
N/A
0DataRank · unranked
9 citations

Josepha Klas, Kimberly A. Foster, Sara Cohen, Courtney R. Plumlee, Fergal J. Duffy +10 more

Early and opposing neutrophil and CD4 T cell responses shape pulmonary tuberculosis pathology

The Journal of Experimental Medicine(2025)10.1084/jem.20250161
N/A
0DataRank · unranked
18 citations

Josepha Klas, Kimberly A. Foster, Molly E. Kanagy, S. B. Cohen, Courtney R. Plumlee +13 more

Dendritic cells regulate the innate-adaptive balance in lymph nodes for optimal host defense

Cell(2025)10.1016/j.cell.2025.11.027
N/A
0DataRank · unranked
9 citations

Michael Y. Gerner, Jessica Y. Huang

Induction of Type I Interferon–Dependent Activation and Migration of Inflammatory Dendritic Cells to Local Lymph Nodes by UV Light Exposure

Arthritis & Rheumatology(2025)10.1002/art.43108
N/A
0DataRank · unranked
7 citations

Jaime Chao, Michael Y. Gerner, Keith B. Elkon, Xizhang Sun

T cell–macrophage interactions in tuberculosis: What we've got here is failure to communicate

Journal of Internal Medicine(2025)10.1111/joim.70028
N/A
0DataRank · unranked
5 citations

Cecilia S. Lindestam Arlehamn, Rhea N. Coler, Michael Y. Gerner, Delia Goletti, Deborah A. Lewinsohn +8 more

TGFβ restricts expansion, survival, and function of T cells within the tuberculous granuloma

Cell Host & Microbe(2021)10.1016/j.chom.2021.02.005
N/A
0DataRank · unranked
90 citations

Kristin N. Adams, Courtney R. Plumlee, Caleb Stoltzfus, Laila Shehata, Albanus O. Moguche +8 more

Dendritic Cell Organization and Function in Innate and Adaptive Immune Defense Within Lymph Nodes

Immunological Reviews(2025)10.1111/imr.70071
N/A
0DataRank · unranked
3 citations

Michael Y. Gerner, Jessica Huang

Lymphatic chain gradients regulate the magnitude and heterogeneity of T cell responses to vaccination

The Journal of Experimental Medicine(2025)10.1084/jem.20241311
N/A
0DataRank · unranked
3 citations

Jessica Huang, Michael Y. Gerner, Michael T. Conlon

Multi-Parameter Quantitative Imaging of Tumor Microenvironments Reveals Perivascular Immune Niches Associated with Anti-Tumor Immunity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.17.448881
N/A
0DataRank · unranked
5 citations

Ramya Sivakumar, Leo Kunz, BE Olin Pope, Elena Menietti, Dario Speziale +6 more

CXCR6 positions cytotoxic T cells to receive critical survival signals in the tumor microenvironment

Cell(2021)10.1016/j.cell.2021.07.015
N/A
0DataRank · unranked
473 citations

Raphael Kfuri-Rubens, Jasper N. Pruessmann, Aleksandra J. Ozga, Marius Messemaker, Bruno L. Cadilha +16 more