🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Fang Li

Jilin University

ORCID: 0000-0001-5456-0255

Also affiliated with Huzhou University, Zhengzhou People's Hospital

Computer ScienceMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

3.3Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Phen2Gene: rapid phenotype-driven gene prioritization for rare diseases

NAR Genomics and Bioinformatics(2020)10.1093/nargab/lqaa032

Top 7%

3.3DataRank

Top 7%87 citations

James M. Havrilla, Fang Li, Ying Chen, Jacqueline Peng, Cong Liu +8 more

Papers

Driven by 13 papers — median percentile 93. Top paper: “Phen2Gene: rapid phenotype-driven gene prioritization for rare diseases”.

Phen2Gene: rapid phenotype-driven gene prioritization for rare diseases

NAR Genomics and Bioinformatics(2020)10.1093/nargab/lqaa032

Top 7%

3.3DataRank

Top 7%87 citations

James M. Havrilla, Fang Li, Ying Chen, Jacqueline Peng, Cong Liu +8 more

LIQA: long-read isoform quantification and analysis

Genome biology(2021)10.1186/s13059-021-02399-8

N/A

2.7DataRank · unranked

89 citations

Fang Li, Xuelian Chen, Jiang F. Zhong, Mingyao Li, Kai Wang +1 more

Deciphering “the language of nature”: A transformer-based language model for deleterious mutations in proteins

The Innovation(2023)10.1016/j.xinn.2023.100487

N/A

1.2DataRank · unranked

38 citations

Fang Li, Kai Wang, Theodore T. Jiang

A survey of algorithms for the detection of genomic structural variants from long-read sequencing data

Nature Methods(2023)10.1038/s41592-023-01932-w

N/A

0.666DataRank · unranked

84 citations

Qian Liu, Jonathan E. Perdomo, Fang Li, Kai Wang, Mian Umair Ahsan

Novel Scalable and Simplified System to Generate Microglia-Containing Cerebral Organoids From Human Induced Pluripotent Stem Cells

Frontiers in Cellular Neuroscience(2021)10.3389/fncel.2021.682272

N/A

0.601DataRank · unranked

54 citations

Yongang Zhang, Jinbiao Liu, Yuan Lin, Peng Wang, Zhengyu Wei +9 more

SETDB1 Restrains Endogenous Retrovirus Expression and Antitumor Immunity during Radiotherapy

Cancer Research(2022)10.1158/0008-5472.can-21-3523

N/A

0DataRank · unranked

43 citations

Xuhui Bao, Mengjie Hu, Meng Jiao, Fang Li, Chuan‐Yuan Li +1 more

Multi-label classification for biomedical literature: an overview of the BioCreative VII LitCovid Track for COVID-19 literature topic annotations

Database(2022)10.1093/database/baac069

N/A

0DataRank · unranked

41 citations

Alexis Allot, Robert Leaman, Rezarta Islamaj, Jingcheng Du, Fang Li +34 more

Haplotyping SNPs for allele-specific gene editing of the expanded huntingtin allele using long-read sequencing

Human Genetics and Genomics Advances(2022)10.1016/j.xhgg.2022.100146

N/A

0DataRank · unranked

15 citations

Alex Mas Monteys, Alexandra Dürr, Megan S. Keiser, Congsheng Cheng, Akhil Harapanahalli +4 more

VHL loss enables immune checkpoint blockade therapy by boosting type I interferon response

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.28.569047

N/A

0DataRank · unranked

1 citations

Xuhui Bao, Mengjie Hu, Dong Pan, Xinjian Liu, Jonathan Kim +3 more

LongGF: computational algorithm and software tool for fast and accurate detection of gene fusions by long-read transcriptome sequencing

BMC Genomics(2020)10.1186/s12864-020-07207-4

N/A

0DataRank · unranked

55 citations

Yu Hu, Andres Stucky, Fang Li, Jiang F. Zhong, Kai Wang +1 more

LIQA: Long-read Isoform Quantification and Analysis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.09.289793

N/A

0DataRank · unranked

5 citations

Fang Li, Xuelian Chen, Jiang F. Zhong, Mingyao Li, Kai Wang +1 more

NanoCaller for accurate detection of SNPs and indels in difficult-to-map regions from long-read sequencing by haplotype-aware deep neural networks

Genome biology(2021)10.1186/s13059-021-02472-2

N/A

0DataRank · unranked

94 citations

Qian Liu, Fang Li, Kai Wang, Mian Umair Ahsan

DeepRepeat: direct quantification of short tandem repeats on signal data from nanopore sequencing

Genome biology(2022)10.1186/s13059-022-02670-6

N/A

0DataRank · unranked

63 citations

Qian Liu, Alex Mas Monteys, Pedro Gonzalez‐Alegre, Beverly L. Davidson, Kai Wang +1 more