Alexandra A. Abu-Shmais

National Institute of Allergy and Infectious Diseases

Also affiliated with Vanderbilt University Medical Center

MedicineImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 16 papers. Top paper: “Isolation and characterization of IgG3 glycan-targeting antibodies with exceptional cross-reactivity for diverse viral families”.

Isolation and characterization of IgG3 glycan-targeting antibodies with exceptional cross-reactivity for diverse viral families

PLoS Pathogens(2024)10.1371/journal.ppat.1012499

N/A

0.312DataRank · unranked

7 citations

Andrea R. Shiakolas, Jared Lindenberger, Robert A Richardson, Lindsay E Bass, Maggie Barr +29 more

Development of LIBRA-seq for the guinea pig model system as a tool for the evaluation of antibody responses to multivalent HIV-1 vaccines

Journal of Virology(2023)10.1128/jvi.01478-23

N/A

0.251DataRank · unranked

3 citations

Nagarajan Raju, Prudence Kgagudi, Nelia P. Manamela, Alexandra A. Abu-Shmais, Kathryn R. Gripenstraw +10 more

Generation of antigen-specific paired chain antibody sequences using large language models

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.20.629482

N/A

0.165DataRank · unranked

2 citations

Nicole V. Johnson, Alexis K. Janke, Sofia Held, Toma M. Marinov, Gwen Jordaan +18 more

Glycan-reactive antibodies isolated from human HIV-1 vaccine trial participants show broad pathogen cross-reactivity

Journal of Virology(2025)10.1128/jvi.01256-25

N/A

0.104DataRank · unranked

1 citations

Xiaoying Shen, Alexandra A. Abu-Shmais, Perry T. Wasdin, Katarzyna Janowska, Robert J. Edwards +37 more

Antibody sequence determinants of viral antigen specificity

mBio(2024)10.1128/mbio.01560-24

N/A

0DataRank · unranked

11 citations

Matthew J. Vukovich, Perry T. Wasdin, Yukthi P. Suresh, Toma M. Marinov, Scott A. Rush +8 more

Potent HPIV3-neutralizing IGHV5-51 Antibodies Identified from Multiple Individuals Show L Chain and CDRH3 Promiscuity

The Journal of Immunology(2024)10.4049/jimmunol.2300880

N/A

0DataRank · unranked

8 citations

Rose Miller, Alexis K. Janke, Rachael M. Wolters, Clinton Holt, Nagarajan Raju +5 more

A mutation in the coronavirus nsp13-helicase impairs enzymatic activity and confers partial remdesivir resistance

mBio(2023)10.1128/mbio.01060-23

N/A

0DataRank · unranked

20 citations

Young Joo Choi, Anoosha Banerjee, Gabriel I. Small, Jordan Anderson-Daniels, Jennifer Gribble +8 more

A potently neutralizing and protective human antibody targeting antigenic site V on RSV and hMPV fusion glycoprotein

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.31.621295

N/A

0DataRank · unranked

3 citations

Luqiang Guo, Ahmed Magdy Khalil, Rose Miller, Alexis K. Janke, Matthew J. Vukovich +12 more

Design of Antigen-Specific Antibody CDRH3 Sequences Using AI and Germline-Based Templates

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.22.586241

N/A

0DataRank · unranked

2 citations

Alexandra A. Abu-Shmais, Alexis K. Janke, Ivelin S. Georgiev, Toma M. Marinov

Generation of antigen-specific paired-chain antibodies using large language models

Cell(2025)10.1016/j.cell.2025.10.006

N/A

0DataRank · unranked

20 citations

Nicole V. Johnson, Alexis K. Janke, Sofia Held, Toma M. Marinov, Gwen Jordaan +19 more

Cross-neutralizing and potent human monoclonal antibodies against historical and emerging H5Nx influenza viruses

Nature Microbiology(2025)10.1038/s41564-025-02137-x

N/A

0DataRank · unranked

5 citations

Gray Freeman, Adrian Creanga, Matthew J. Vukovich, Tek Narsingh Malla, Grace Mantus +29 more

Glycan-reactive antibodies isolated from human HIV-1 vaccine trial participants show broad pathogen cross-reactivity

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.17.633475

N/A

0DataRank · unranked

0 citations

Xiaoying Shen, Alexandra A. Abu-Shmais, Perry T. Wasdin, Katarzyna Janowska, Robert J. Edwards +28 more

Negative binomial mixture model for identification of noise in antibody-antigen specificity predictions from single-cell data

Bioinformatics Advances(2024)10.1093/bioadv/vbae170

N/A

0DataRank · unranked

3 citations

Alexandra A. Abu-Shmais, Michael Irvin, Matthew J. Vukovich, Ivelin S. Georgiev, Perry T. Wasdin

Convergent Sequence Features of Antiviral B Cells

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.06.556442

N/A

0DataRank · unranked

7 citations

Matthew J. Vukovich, Perry T. Wasdin, Yukthi P. Suresh, Scott A. Rush, Rebecca A. Gillespie +7 more

Development of LIBRA-seq for the Guinea Pig Model System as a Tool for the Evaluation of Antibody Responses to Multivalent HIV-1 Vaccines

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.25.559382

N/A

0DataRank · unranked

0 citations

Nagarajan Raju, Prudence Kgagudi, Nelia P. Manamela, Alexandra A. Abu-Shmais, Kathryn R. Gripenstraw +10 more

Negative Binomial Mixture Model for Identification of Noise in Antigen-Specificity Predictions by LIBRA-seq

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.13.562258

N/A

0DataRank · unranked

0 citations

Alexandra A. Abu-Shmais, Michael Irvin, Matthew J. Vukovich, Ivelin S. Georgiev, Perry T. Wasdin