Licong Cui

Also affiliated with The University of Texas Health Science Center, The University of Texas Health Science Center at Houston

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.4Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

An ontology-based approach for harmonization and cross-cohort query of Alzheimer’s disease data resources

BMC Medical Informatics and Decision Making(2023)10.1186/s12911-023-02250-z

Top 35%

0.562DataRank

Top 35%12 citations

Xiaojin Li, Guo‐Qiang Zhang, Cui Tao, Paul E. Schulz, the Alzheimer’s Disease Neuroimaging Initiative +2 more

Papers

Driven by 39 papers — median percentile 62. Top paper: “Metformin Enhances Autophagy and Normalizes Mitochondrial Function to Alleviate Aging-Associated Inflammation”.

Metformin Enhances Autophagy and Normalizes Mitochondrial Function to Alleviate Aging-Associated Inflammation

Cell Metabolism(2020)10.1016/j.cmet.2020.04.015

N/A

0.956DataRank · unranked

586 citations

Madhur Agrawal, Grace McCambridge, Dequina Nicholas, Hatice Hastürk, Jing Liu +16 more

An ontology-based approach for harmonization and cross-cohort query of Alzheimer’s disease data resources

BMC Medical Informatics and Decision Making(2023)10.1186/s12911-023-02250-z

Top 35%

0.562DataRank

Top 35%12 citations

Xiaojin Li, Guo‐Qiang Zhang, Cui Tao, Paul E. Schulz, the Alzheimer’s Disease Neuroimaging Initiative +2 more

Web-based interactive mapping from data dictionaries to ontologies, with an application to cancer registry

BMC Medical Informatics and Decision Making(2020)10.1186/s12911-020-01288-7

Top 36%

0.541DataRank

Top 36%12 citations

Ningzhou Zeng, Isaac Hands, Joseph Hurt-Mueller, Eric B. Durbin, Licong Cui +2 more

Towards quality improvement of vaccine concept mappings in the OMOP vocabulary with a semi-automated method

Journal of Biomedical Informatics(2022)10.1016/j.jbi.2022.104162

Top 38%

0.505DataRank

Top 38%6 citations

Adam Black, Denys Kaduk, Yupeng Li, Christian Reich, Alexander A. Davydov +3 more

A multimodal clinical data resource for personalized risk assessment of sudden unexpected death in epilepsy

Frontiers in Big Data(2022)10.3389/fdata.2022.965715

Top 40%

0.481DataRank

Top 40%10 citations

Shiqiang Tao, Samden Lhatoo, Licong Cui, Yan Huang, Johnson P. Hampson +2 more

A transformation-based method for auditing the IS-A hierarchy of biomedical terminologies in the Unified Medical Language System

Journal of the American Medical Informatics Association(2020)10.1093/jamia/ocaa123

N/A

0.396DataRank · unranked

13 citations

Jay Shi, Yuntao Yang, W. Jim Zheng, Licong Cui, Fengbo Zheng

VaxBot-HPV: A GPT-based Chatbot for Answering HPV Vaccine-related Questions

Research Square(2024)10.21203/rs.3.rs-4876692/v1

N/A

0.360DataRank · unranked

10 citations

Yiming Li, Jianfu Li, Manqi Li, Evan Yu, Muhammad Amith +4 more

Mapping of Alzheimer’s disease related data elements and the NIH Common Data Elements

BMC Medical Informatics and Decision Making(2024)10.1186/s12911-024-02500-8

Top 52%

0.330DataRank

Top 52%7 citations

Rashmie Abeysinghe, Fengbo Zheng, Paul E. Schulz, the Alzheimer’s Disease Neuroimaging Initiative, Licong Cui +1 more

An evidence-based lexical pattern approach for quality assurance of Gene Ontology relations

Briefings in Bioinformatics(2022)10.1093/bib/bbac122

N/A

0.312DataRank · unranked

7 citations

Yuntao Yang, Mason Bartels, W. Jim Zheng, Licong Cui, Rashmie Abeysinghe

Identification of missing concepts in biomedical terminologies using sequence-based formal concept analysis

BMC Medical Informatics and Decision Making(2021)10.1186/s12911-021-01592-w

N/A

0.312DataRank · unranked

7 citations

Rashmie Abeysinghe, Licong Cui, Fengbo Zheng

Detecting missing IS-A relations in the NCI Thesaurus using an enhanced hybrid approach

BMC Medical Informatics and Decision Making(2020)10.1186/s12911-020-01289-6

N/A

0.269DataRank · unranked

5 citations

Rashmie Abeysinghe, Nicholas Sioutos, Lori L Whiteman, Lyubov Remennik, Licong Cui +1 more

Leveraging pretrained language models for seizure frequency extraction from epilepsy evaluation reports

npj Digital Medicine(2025)10.1038/s41746-025-01592-4

N/A

0.241DataRank · unranked

4 citations

Shiqiang Tao, Samden D. Lhatoo, Guoqiang Zhang, Licong Cui, Rashmie Abeysinghe

Leveraging logical definitions and lexical features to detect missing IS-A relations in biomedical terminologies

Journal of Biomedical Semantics(2024)10.1186/s13326-024-00309-y

N/A

0.208DataRank · unranked

3 citations

Fengbo Zheng, Jay Shi, Samden Lhatoo, Licong Cui, Rashmie Abeysinghe

Constructing A Conversation-First Dialogue Model for Comprehensive, Evidence-Based Counseling for HPV Vaccination for Young Adults

Lecture notes in computer science(2025)10.1007/978-3-031-93502-2_5

N/A

0.104DataRank · unranked

1 citations

Chenying Weng, Serena Hou, Lara S. Savas, Ana Neumann, Nicole L. Moore +6 more

Developing provider digital twins for personalized provider-patient communication via a RAG-based conversational framework

Computational and Structural Biotechnology Journal(2025)10.1016/j.csbj.2025.12.007

N/A

0.104DataRank · unranked

1 citations

Yutong Hu, Jianfu Li, Garit Gemeinhardt, Fang Li, Muhammad Amith +4 more

Application of an ontology for model cards to generate computable artifacts for linking machine learning information from biomedical research

PubMed(2023)10.1145/3543873.3587601

N/A

0DataRank · unranked

3 citations

Licong Cui, Kirk Roberts, Cui Tao, Muhammad Amith

VaxBot-HPV: a GPT-based chatbot for answering HPV vaccine-related questions

JAMIA Open(2024)10.1093/jamiaopen/ooaf005

N/A

0DataRank · unranked

28 citations

Jianfu Li, Manqi Li, Evan Yu, Danniel Rhee, Muhammad Amith +5 more

Quantitatively assessing the impact of the quality of SNOMED CT subtype hierarchy on cohort queries

Journal of the American Medical Informatics Association(2024)10.1093/jamia/ocae272

N/A

0DataRank · unranked

3 citations

Xiaojin Li, Yan Huang, Jay Shi, Rashmie Abeysinghe, Cui Tao +4 more

CDEMapper: Enhancing NIH Common Data Element Normalization using Large Language Models

arXiv (Cornell University)(2024)10.48550/arxiv.2412.00491

N/A

0DataRank · unranked

1 citations

Jimin Huang, Huan He, Vincent Zhang, Yujia Zhou, Xubing Hao +11 more

Risk markers for sudden unexpected death in epilepsy: an observational, prospective, multicentre cohort study

The Lancet(2025)10.1016/s0140-6736(25)01636-8

N/A

0DataRank · unranked

27 citations

Xi Luo, Laura Vilella, Nuria Lacuey, Shirin Jamal Omidi, Norma J. Hupp +28 more

CDEMapper: enhancing National Institutes of Health common data element use with large language models

Journal of the American Medical Informatics Association(2025)10.1093/jamia/ocaf064

N/A

0DataRank · unranked

3 citations

Jimin Huang, Huan He, Vincent Zhang, Yujia Zhou, Xubing Hao +11 more

Mapping and Harmonization of CVX vaccine terms to the Vaccine Ontology

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.15.664501

N/A

0DataRank · unranked

1 citations

Warren Manuel, Rashmie Abeysinghe, Jie Zheng, Alexander A. Davydov, Huazhe Yang +4 more

Identifying Developmental Intellectual Disability as a SUDEP Risk Marker from Epilepsy Monitoring Unit Reports Using Large Language Models

Proceedings of the ... International Florida Artificial Intelligence Research Society Conference(2025)10.32473/flairs.38.1.138899

N/A

0DataRank · unranked

0 citations

Rashmie Abeysinghe, Gorbachev Jowah, Shiqiang Tao, Samden Lhatoo, Guoqiang Zhang +2 more

Designing a Narrative-Based Video Game for Adolescents Coping with a Parent’s Cancer

Communications in computer and information science(2025)10.1007/978-3-031-94162-7_8

N/A

0DataRank · unranked

0 citations

Xubing Hao, Sharon Andrews, Eveyln Roldan, Carlos Casado Martínez, Jane Hamilton +3 more

Formal Methods for the Analysis of Biomedical Ontologies

Synthesis lectures on data, semantics and knowledge(2025)10.1007/978-3-031-93776-7

N/A

0DataRank · unranked

0 citations

Rashmie Abeysinghe, Licong Cui, Guo‐Qiang Zhang

A Bespoke Electronic Health Record for Epilepsy Care (EpiToMe): Development and Qualitative Evaluation

Journal of Medical Internet Research(2020)10.2196/22939

N/A

0DataRank · unranked

11 citations

Samden Lhatoo, Johnson P. Hampson, Licong Cui, Guo‐Qiang Zhang, Shiqiang Tao

Detection of Postictal Generalized Electroencephalogram Suppression: Random Forest Approach

JMIR Medical Informatics(2020)10.2196/17061

N/A

0DataRank · unranked

17 citations

Shiqiang Tao, Shirin Jamal-Omidi, Yan Huang, Samden D. Lhatoo, Guo‐Qiang Zhang +2 more

SSIF: Subsumption-based Sub-term Inference Framework to audit Gene Ontology

Bioinformatics(2020)10.1093/bioinformatics/btaa106

N/A

0DataRank · unranked

8 citations

Eugene W. Hinderer, Hunter Moseley, Licong Cui, Rashmie Abeysinghe

Enhancing the Quality of Hierarchic Relations in the National Cancer Institute Thesaurus to Enable Faceted Query of Cancer Registry Data

JCO Clinical Cancer Informatics(2020)10.1200/cci.19.00124

N/A

0DataRank · unranked

4 citations

Rashmie Abeysinghe, Fengbo Zheng, Shiqiang Tao, Ningzhou Zeng, Isaac Hands +6 more

A Lexical-based Formal Concept Analysis Method to Identify Missing Concepts in the NCI Thesaurus

PubMed(2020)10.1109/bibm49941.2020.9313186

N/A

0DataRank · unranked

8 citations

Licong Cui, Fengbo Zheng

HRV-Spark: Computing Heart Rate Variability Measures Using Apache Spark

PubMed(2020)10.1109/bibm49941.2020.9313361

N/A

0DataRank · unranked

1 citations

Yuanyuan Wu, Jinze Liu, Licong Cui, Xufeng Qu

Toward a standard formal semantic representation of the model card report

BMC Bioinformatics(2022)10.1186/s12859-022-04797-6

N/A

0DataRank · unranked

18 citations

Licong Cui, Degui Zhi, Kirk Roberts, Xiaoqian Jiang, Fang Li +3 more

A deep learning approach to identify missingis-arelations in SNOMED CT

Journal of the American Medical Informatics Association(2022)10.1093/jamia/ocac248

N/A

0DataRank · unranked

10 citations

Fengbo Zheng, Elmer V. Bernstam, Jay Shi, Olivier Bodenreider, Licong Cui +1 more

A hybrid unsupervised and supervised learning approach for postictal generalized EEG suppression detection

Frontiers in Neuroinformatics(2022)10.3389/fninf.2022.1040084

N/A

0DataRank · unranked

3 citations

Yan Huang, Samden Lhatoo, Shiqiang Tao, Laura Vilella Bertran, Guo‐Qiang Zhang +2 more

Identification of missing hierarchical relations in the vaccine ontology using acquired term pairs

Journal of Biomedical Semantics(2022)10.1186/s13326-022-00276-2

N/A

0DataRank · unranked

4 citations

Rashmie Abeysinghe, Yongqun He, Cui Tao, Licong Cui, Warren Manuel

Identifying Missing IS-A Relations in Orphanet Rare Disease Ontology

2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)(2022)10.1109/bibm55620.2022.9995614

N/A

0DataRank · unranked

7 citations

Rashmie Abeysinghe, Xubing Hao, Licong Cui, Maryamsadat Mohtashamian

A substring replacement approach for identifying missing IS-A relations in SNOMED CT

2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)(2022)10.1109/bibm55620.2022.9995595

N/A

0DataRank · unranked

5 citations

Rashmie Abeysinghe, Jay Shi, Licong Cui, Xubing Hao

Population-Based Mini-Mental State Examination Norms in Adults of Mexican Heritage in the Cameron County Hispanic Cohort

Journal of Alzheimer s Disease(2023)10.3233/jad-220934

N/A

0DataRank · unranked

10 citations

Miriam Hinojosa, Kristofer Harris, Xiaojin Li, Christine Farrell, Madison Shyer +15 more

Logical definition-based identification of potential missing concepts in SNOMED CT

BMC Medical Informatics and Decision Making(2023)10.1186/s12911-023-02183-7

N/A

0DataRank · unranked

3 citations

Rashmie Abeysinghe, Kirk Roberts, Licong Cui, Xubing Hao

Licong Cui

Indexed papers

Top data-sharing exemplar

Papers