🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Joan Segura

San Diego Supercomputer Center

ORCID: 0000-0001-5593-735X
Biochemistry, Genetics and Molecular BiologyMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
17.8Author DataRank

Indexed papers

7in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning

Nucleic Acids Research(2022)10.1093/nar/gkac1077
Top 4%
5.5DataRank
Top 4%888 citations

Charmi Bhikadiya, Chunxiao Bi, Sebastian Bittrich, Henry Chao, Li Chen +36 more

Papers

Driven by 13 papers — median percentile 89. Top paper: “RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning”.

RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning

Nucleic Acids Research(2022)10.1093/nar/gkac1077
Top 4%
5.5DataRank
Top 4%888 citations

Charmi Bhikadiya, Chunxiao Bi, Sebastian Bittrich, Henry Chao, Li Chen +36 more

RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D

Protein Science(2021)10.1002/pro.4213
Top 6%
4.0DataRank
Top 6%196 citations

Charmi Bhikadiya, Chunxiao Bi, Sebastian Bittrich, Li Chen, G.V. Crichlow +30 more

Updated resources for exploring experimentally-determined PDB structures and Computed Structure Models at the RCSB Protein Data Bank

Nucleic Acids Research(2024)10.1093/nar/gkae1091
Top 8%
2.8DataRank
Top 8%276 citations

Rusham Bhatt, Charmi Bhikadiya, Chunxiao Bi, Alison Biester, Pratyoy Biswas +46 more

RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D

Protein Science(2022)10.1002/pro.4482
Top 11%
2.0DataRank
Top 11%107 citations

Charmi Bhikadiya, Chunxiao Bi, Sebastian Bittrich, Henry Chao, Li Chen +36 more

RCSB Protein Data Bank: Efficient Searching and Simultaneous Access to One Million Computed Structure Models Alongside the PDB Structures Enabled by Architectural Advances

Journal of Molecular Biology(2023)10.1016/j.jmb.2023.167994
Top 11%
1.9DataRank
Top 11%80 citations

Charmi Bhikadiya, Chunxiao Bi, Henry Chao, José M. Duarte, Shuchismita Dutta +12 more

RCSB Protein Data Bank 1D tools and services

Bioinformatics(2020)10.1093/bioinformatics/btaa1012
Top 18%
1.1DataRank
Top 18%33 citations

Yana Rose, John Westbrook, S.K. Burley, José M. Duarte, Joan Segura

RCSB Protein Data Bank: Delivering integrative structures alongside experimental structures and computed structure models

Nucleic Acids Research(2025)10.1093/nar/gkaf1187
Top 40%
0.483DataRank
Top 40%17 citations

Yana Rose, Dennis W. Piehl, José M. Duarte, Sebastian Bittrich, Chunxiao Bi +21 more

rcsb-api: Python Toolkit for Streamlining Access to RCSB Protein Data Bank APIs

Journal of Molecular Biology(2025)10.1016/j.jmb.2025.168970
N/A
0.269DataRank · unranked
5 citations

Brinda Vallat, Ivana Truong, Habiba Morsy, Rusham Bhatt, Santiago Blaumann +11 more

BIPSPI+: Mining Type-Specific Datasets of Protein Complexes to Improve Protein Binding Site Prediction

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167556
N/A
0DataRank · unranked
13 citations

José Ramón Macías, Carlos Óscar S. Sorzano, Jose-Maria Carazo, Joan Segura, Rubén Sánchez-García

RCSB Protein Data Bank 1D3D module: displaying positional features on macromolecular assemblies

Bioinformatics(2022)10.1093/bioinformatics/btac317
N/A
0DataRank · unranked
9 citations

Yana Rose, Sebastian Bittrich, S.K. Burley, José M. Duarte, Joan Segura

Visualizing and analyzing 3D biomolecular structures using Mol* at RCSB.org: Influenza A H5N1 virus proteome case study

Protein Science(2025)10.1002/pro.70093
N/A
0DataRank · unranked
2 citations

Alexander Rose, David Sehnal, José M. Duarte, Yana Rose, Joan Segura +10 more

RCSB protein Data Bank: exploring protein 3D similarities via comprehensive structural alignments

Bioinformatics(2024)10.1093/bioinformatics/btae370
N/A
0DataRank · unranked
201 citations

Joan Segura, José M. Duarte, S.K. Burley, Yana Rose, Sebastian Bittrich

Exploring experimental structures and computed structure models from artificial intelligence/machine learning at RCSB Protein Data Bank (RCSB PDB, RCSB.org)

Biophysical Journal(2023)10.1016/j.bpj.2022.11.1606
N/A
0DataRank · unranked
0 citations

José Alberto Duarte, Sebastian Bittrich, Chunxiao Bi, Charmi Bhikadiya, Maryam Fayazi +10 more