🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Tristan Bepler

ORCID: 0000-0001-5595-9954
Biochemistry, Genetics and Molecular BiologyMaterials SciencePhysics and Astronomy

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 5%percentile
0.498Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Smart data collection for CryoEM

Journal of Structural Biology(2022)10.1016/j.jsb.2022.107913
Top 38%
0.498DataRank
Top 38%16 citations

Andrew J. Borst, Jonathan Bouvette, Giuseppe Cannone, Songye Chen, Anchi Cheng +19 more

Papers

Driven by 10 papers — median percentile 62. Top paper: “Learning the protein language: Evolution, structure, and function”.

Learning the protein language: Evolution, structure, and function

Cell Systems(2021)10.1016/j.cels.2021.05.017
N/A
10.3DataRank · unranked
543 citations

Bonnie Berger, Tristan Bepler

Topaz-Denoise: general deep denoising models for cryoEM and cryoET

Nature Communications(2020)10.1038/s41467-020-18952-1
N/A
0.960DataRank · unranked
601 citations

K. Kelley, Alex J. Noble, Bonnie Berger, Tristan Bepler

Synthetic molecular evolution of antimicrobial peptides

Current Opinion in Biotechnology(2022)10.1016/j.copbio.2022.102718
N/A
0.571DataRank · unranked
44 citations

Tristan Bepler, Karen Pepper, Debbie Fu, Timothy K. Lu, Charles H. Chen

Smart data collection for CryoEM

Journal of Structural Biology(2022)10.1016/j.jsb.2022.107913
Top 38%
0.498DataRank
Top 38%16 citations

Andrew J. Borst, Jonathan Bouvette, Giuseppe Cannone, Songye Chen, Anchi Cheng +19 more

Learning to automate cryo-electron microscopy data collection with Ptolemy

IUCrJ(2022)10.1107/s2052252522010612
N/A
0DataRank · unranked
16 citations

Alex J. Noble, Anchi Cheng, Tristan Bepler, Paul T. Kim

Fully Automated Multi-Grid Cryo-EM Screening using Smart Leginon

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.23.501225
N/A
0DataRank · unranked
5 citations

Paul T. Kim, Huihui Kuang, Joshua H. Mendez, Eugene Chua, Kashyap Maruthi +11 more

Antiviral activity of the host defense peptide piscidin 1: investigating a membrane-mediated mode of action

Frontiers in Chemistry(2024)10.3389/fchem.2024.1379192
N/A
0DataRank · unranked
6 citations

Michael D. Barrera, Mary T. Rooney, Yawei Xiong, Huihui Kuang, Evan P. Goodell +7 more

CryoDRGN: Reconstruction of heterogeneous structures from cryo-electron micrographs using neural networks

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.27.003871
N/A
0DataRank · unranked
16 citations

Tristan Bepler, Bonnie Berger, Joseph H. Davis, Ellen D. Zhong

An engineered protein-phosphorylation toggle network with implications for endogenous network discovery

Science(2021)10.1126/science.aav0780
N/A
0DataRank · unranked
37 citations

Tristan Bepler, Brian Teague, Bonnie Berger, James R. Broach, Ron Weiss +1 more

Fully automated multi-grid cryoEM screening using Smart Leginon

IUCrJ(2022)10.1107/s2052252522010624
N/A
0DataRank · unranked
36 citations

Paul T. Kim, Huihui Kuang, Joshua H. Mendez, Eugene Chua, Kashyap Maruthi +11 more