Alejandro Chavez

Also affiliated with Columbia University Irving Medical Center, UC San Diego Health System, University of California San Diego, AltaMed, Charles R. Drew University of Medicine and Science, Columbia University

Biochemistry, Genetics and Molecular BiologyMedicineComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 26 papers. Top paper: “Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors”.

Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors

Nature Communications(2021)10.1038/s41467-021-22362-2

N/A

4.1DataRank · unranked

115 citations

F. Forouhar, Hengrui Liu, Seo Jung Hong, Fang-Yu Lin, Manoj S. Nair +7 more

Functional map of SARS-CoV-2 3CL protease reveals tolerant and immutable sites

Cell Host & Microbe(2022)10.1016/j.chom.2022.08.003

N/A

0.626DataRank · unranked

64 citations

Seo Jung Hong, Jenny Sheng, Farideh Bahari, Bruce Culbertson, Fereshteh Fallah Atanaki +10 more

The Functional Landscape of SARS-CoV-2 3CL Protease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.23.497404

N/A

0.415DataRank · unranked

6 citations

Seo Jung Hong, Jenny Sheng, Farideh Bahari, Bruce Culbertson, Fereshteh Fallah Atanaki +10 more

Interrogation of genome-wide, experimentally dissected gene regulatory networks reveals mechanisms underlying dynamic cellular state control

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.28.449297

N/A

0.406DataRank · unranked

14 citations

Jeremy Worley, Mikko Turunen, Kelly Wong, Ester Calvo Fernández, Evan Paull +7 more

Development of small molecule non-covalent coronavirus 3CL protease inhibitors from DNA-encoded chemical library screening

Nature Communications(2025)10.1038/s41467-024-55421-5

N/A

0.373DataRank · unranked

11 citations

Arie Zask, F. Forouhar, Sho Iketani, Alana D. N. Williams, Daniel R. Vaz +10 more

A multiplex platform to identify mechanisms and modulators of proteotoxicity in neurodegeneration

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.19.508444

N/A

0.292DataRank · unranked

6 citations

Seema Qamar, Jenny Sheng, Lei Huang, Jonathon Nixon‐Abell, Schuyler Melore +11 more

High-throughput tagging of endogenous loci for rapid characterization of protein function

Science Advances(2024)10.1126/sciadv.adg8771

N/A

0.292DataRank · unranked

6 citations

Alexander F. Kratz, Shiye Chen, Jenny Sheng, Hark Kyun Kim, Liudeng Zhang +3 more

Multiplex neurodegeneration proteotoxicity platform reveals DNAJB6 promotes non-toxic FUS condensate gelation and inhibits neurotoxicity

Nature Communications(2025)10.1038/s41467-025-65178-0

N/A

0.241DataRank · unranked

4 citations

Seema Qamar, Pushya Krishna, Vladislav A. Korobeynikov, Hannes Ausserwӧger, Alyssa Miller +26 more

High throughput identification of genetic regulators of microglial inflammatory processes in Alzheimer's disease

Journal of Neuroinflammation(2025)10.1186/s12974-025-03562-9

N/A

0.241DataRank · unranked

4 citations

Wei Lai, Joonwon Kim, Ellen Angeles, Gunjandeep Singh, Shiye Chen +8 more

A multiplex method for rapidly identifying viral protease inhibitors

Molecular Systems Biology(2025)10.1038/s44320-024-00082-1

N/A

0.239DataRank · unranked

3 citations

Samuel J. Resnick, Sho Iketani, Ji Won Cha, Benjamin Alexander Albert, Christopher T. Fazekas +19 more

Fecal exfoliome sequencing captures immune dynamics of the healthy and inflamed gut

Nature Biotechnology(2025)10.1038/s41587-025-02894-4

N/A

0.165DataRank · unranked

2 citations

Yiwei Sun, Carlotta Ronda, Chrystal F. Mavros, Jing Li, Justin Jacobse +8 more

Focused ultrasound-mediated brain genome editing

Research Square(2023)10.21203/rs.3.rs-2365576/v1

N/A

0DataRank · unranked

0 citations

Yeh‐Hsing Lao, Robin Ji, Joyce K. Zhou, Kathy J. Snow, Nancy Kwon +18 more

CRISPR activation to repair electrocardiogram abnormalities caused by a FLNC truncating variant in mice

European Heart Journal(2025)10.1093/eurheartj/ehaf703

N/A

0DataRank · unranked

7 citations

Laura Lalaguna, Blanca Rubio, Arturo Ausiello, Marina López‐Olañeta, Rocío F Serrano-Blanco +6 more

Development of a Cervical Cancer Screening Program in Rural Guatemala

Global Health Science and Practice(2025)10.9745/ghsp-d-24-00282

N/A

0DataRank · unranked

0 citations

Elizabeth White, Alli Foreman, Alejandro Chavez, Tana Chongsuwat, Linda Foxworthy +9 more

Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.03.235291

N/A

0DataRank · unranked

16 citations

F. Forouhar, Hengrui Liu, Seo Jung Hong, Fang‐Yu Lin, Manoj S. Nair +7 more

Combinatorial protein engineering identifies potent CRISPR activators with reduced toxicity

Nature Communications(2025)10.1038/s41467-025-65986-4

N/A

0DataRank · unranked

0 citations

Alexander F. Kratz, Mark B. De Los Santos, Antoine Forget, Richa Tiwari, Gwendolyn M. Jang +12 more

A simplified cell-based assay to identify coronavirus 3CL protease inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.29.272864

N/A

0DataRank · unranked

11 citations

Sho Iketani, Seo Jung Hong, Arie Zask, Hengrui Liu, Sung Soo Kim +10 more

Author Correction: Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors

Nature Communications(2021)10.1038/s41467-021-23082-3

N/A

0DataRank · unranked

8 citations

F. Forouhar, Hengrui Liu, Seo Jung Hong, Fang-Yu Lin, Manoj S. Nair +7 more

Isolation and comparative analysis of antibodies that broadly neutralize sarbecoviruses

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.11.472236

N/A

0DataRank · unranked

8 citations

Sho Iketani, Yicheng Guo, Ryan G. Casner, Eswar R. Reddem, Manoj S. Nair +25 more

Development of optimized drug-like small molecule inhibitors of the SARS-CoV-2 3CL protease for treatment of COVID-19

Nature Communications(2022)10.1038/s41467-022-29413-2

N/A

0DataRank · unranked

96 citations

Sho Iketani, Arie Zask, Nisha Khanizeman, Eva Bednářová, F. Forouhar +27 more

An antibody class with a common CDRH3 motif broadly neutralizes sarbecoviruses

Science Translational Medicine(2022)10.1126/scitranslmed.abn6859

N/A

0DataRank · unranked

66 citations

Sho Iketani, Yicheng Guo, Eswar R. Reddem, Ryan G. Casner, Manoj S. Nair +26 more

High-throughput tagging of endogenous loci for rapid characterization of protein function

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.16.516691

N/A

0DataRank · unranked

1 citations

Alexander F. Kratz, Shiye Chen, Jenny Sheng, Liudeng Zhang, Brijesh Kumar Singh +2 more

Focused ultrasound-mediated brain genome editing

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.10.519924

N/A

0DataRank · unranked

1 citations

Robin Ji, Joyce K. Zhou, Kathy J. Snow, Nancy Kwon, Ethan Saville +18 more

Targeted DNA integration in human cells without double-strand breaks using CRISPR-associated transposases

Nature Biotechnology(2023)10.1038/s41587-023-01748-1

N/A

0DataRank · unranked

142 citations

Rebeca T. King, Tyler S. Halpin-Healy, Sanne E. Klompe, Marcus I. Hogan, Phuc Leo H. Vo +4 more

Focused ultrasound–mediated brain genome editing

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2302910120

N/A

0DataRank · unranked

33 citations

Robin Ji, Joyce K. Zhou, Kathy J. Snow, Nancy Kwon, Ethan Saville +18 more

Targeted DNA integration in human cells without double-strand breaks using CRISPR RNA-guided transposases

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.17.533036

N/A

0DataRank · unranked

2 citations

Rebeca T. King, Tyler S. Halpin-Healy, Sanne E. Klompe, Marcus I. Hogan, Phuc Leo H. Vo +4 more