Susan V. Lynch

Also affiliated with UCSF Benioff Children's Hospital

MedicineBiochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.778Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

VMAP: Vaginal Microbiome Atlas during Pregnancy

JAMIA Open(2024)10.1093/jamiaopen/ooae099

Top 56%

0.290DataRank

Top 56%5 citations

Tomiko Oskotsky, Boris Oskotsky, Camilla Wibrand, Alennie Roldan, Alice Tang +19 more

Papers

Driven by 54 papers — median percentile 41. Top paper: “Distinct associations of sputum and oral microbiota with atopic, immunologic, and clinical features in mild asthma”.

Distinct associations of sputum and oral microbiota with atopic, immunologic, and clinical features in mild asthma

Journal of Allergy and Clinical Immunology(2020)10.1016/j.jaci.2020.03.028

N/A

2.5DataRank · unranked

100 citations

Laura S. Christian, Snehal Nariya, Jeanmarie R. Gonzalez, Nirav R. Bhakta, K. Mark Ansel +17 more

Strain-resolved analysis in a randomized trial of antibiotic pretreatment and maintenance dose delivery mode with fecal microbiota transplant for ulcerative colitis

Scientific Reports(2022)10.1038/s41598-022-09307-5

N/A

1.4DataRank · unranked

53 citations

Yvette M. Piceno, Martin Zydek, Bing Zhang, Lara Aboud Syriani, Jonathan P. Terdiman +6 more

Heritable vaginal bacteria influence immune tolerance and relate to early-life markers of allergic sensitization in infancy

Cell Reports Medicine(2022)10.1016/j.xcrm.2022.100713

N/A

1.2DataRank · unranked

44 citations

Elze Rackaityte, Brandon LaMere, Douglas Fadrosh, Kei E. Fujimura, Ariane Panzer +16 more

Human gut bacterial metabolism drives Th17 activation and colitis

Cell Host & Microbe(2021)10.1016/j.chom.2021.11.001

N/A

0.839DataRank · unranked

267 citations

Qi Yan Ang, Renuka R. Nayak, Annamarie E. Bustion, Moriah Sandy, Bing Zhang +5 more

Prebiotic to Improve Calcium Absorption in Postmenopausal Women After Gastric Bypass: A Randomized Controlled Trial

The Journal of Clinical Endocrinology & Metabolism(2021)10.1210/clinem/dgab883

N/A

0.650DataRank · unranked

18 citations

Sisi Cao, Connie M. Weaver, Nicole J King, Sheena Patel, Hillary Kingman +15 more

Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.101350

N/A

0.546DataRank · unranked

37 citations

Tomiko Oskotsky, Alice Tang, Alennie Roldan, Verena Chung, Connie Ha +56 more

Infant gut bacterial community composition and food‐related manifestation of atopy in early childhood

Pediatric Allergy and Immunology(2021)10.1111/pai.13704

N/A

0.510DataRank · unranked

29 citations

Alexandra R. Sitarik, Haejin Kim, Gary B. Huffnagle, Kei E. Fujimura, Germaine Yong +9 more

Intestinal inflammation alters the antigen-specific immune response to a skin commensal

Cell Reports(2022)10.1016/j.celrep.2022.110891

N/A

0.477DataRank · unranked

23 citations

Laura R. Dwyer, Miqdad O. Dhariwala, Antonin Weckel, Jeanmarie R. Gonzalez, Joy N. Okoro +13 more

Early-life nasal microbiota dynamics relate to longitudinal respiratory phenotypes in urban children

Journal of Allergy and Clinical Immunology(2024)10.1016/j.jaci.2023.12.032

N/A

0.406DataRank · unranked

14 citations

Juliana Durack, Kole Lynch, Douglas Fadrosh, Kei E. Fujimura, Faith Vundla +15 more

Precocious infant fecal microbiome promotes enterocyte barrier dysfuction, altered neuroendocrine signaling and associates with increased childhood obesity risk

Gut Microbes(2023)10.1080/19490976.2023.2290661

N/A

0.385DataRank · unranked

12 citations

Cara E. Porsche, Alexandra R. Sitarik, Kei E. Fujimura, Kathryn McCauley, Dat Nguyen +8 more

Alteration in the gut microbiome is associated with changes in bone metabolism after laparoscopic sleeve gastrectomy

Journal of Bone and Mineral Research(2024)10.1093/jbmr/zjad017

N/A

0.360DataRank · unranked

10 citations

Kathryn McCauley, Susan V. Lynch, Renuka R. Nayak, Nicole J King, Sheena Patel +12 more

Sustained mucosal colonization and fecal metabolic dysfunction by Bacteroides associates with fecal microbial transplant failure in ulcerative colitis patients

Scientific Reports(2024)10.1038/s41598-024-62463-8

N/A

0.345DataRank · unranked

9 citations

Kevin M. Magnaye, Emily Stryker, Jacqueline Moltzau Anderson, Cara E. Porsche, Sandra Hertz +8 more

Host factors are associated with vaginal microbiome structure in pregnancy in the ECHO Cohort Consortium

Scientific Reports(2024)10.1038/s41598-024-62537-7

N/A

0.345DataRank · unranked

9 citations

Christine M. Bassis, Jonathan L. Golob, Beatrice Palazzolo, Ananda Sen, Sarah S. Comstock +93 more

Gestational vitamin D concentration and child cognitive development: a longitudinal cohort study in the Environmental influences on Child Health Outcomes Program

American Journal of Clinical Nutrition(2025)10.1016/j.ajcnut.2025.06.017

N/A

0.330DataRank · unranked

8 citations

Monica McGrath, Meredith Palmore, Brent R. Collett, Jean M. Kerver, Christine W. Hockett +94 more

Prenatal Diet and Infant Growth From Birth to Age 24 Months

JAMA Network Open(2024)10.1001/jamanetworkopen.2024.45771

N/A

0.312DataRank · unranked

7 citations

Holly B. Schuh, Emily A. Knapp, Traci A. Bekelman, Diane Catellier, Matt Westlake +88 more

VMAP: Vaginal Microbiome Atlas during Pregnancy

JAMIA Open(2024)10.1093/jamiaopen/ooae099

Top 56%

0.290DataRank

Top 56%5 citations

Tomiko Oskotsky, Boris Oskotsky, Camilla Wibrand, Alennie Roldan, Alice Tang +19 more

VMAP: Vaginal Microbiome Atlas During Pregnancy

medRxiv(2023)10.1101/2023.03.21.23286947

Top 59%

0.263DataRank

Top 59%3 citations

Tomiko Oskotsky, Boris Oskotsky, Camilla Wibrand, Alennie Roldan, Alice Tang +19 more

Clinical and molecular analysis of longitudinal rhinitis phenotypes in an urban birth cohort

Journal of Allergy and Clinical Immunology(2024)10.1016/j.jaci.2024.08.031

N/A

0.241DataRank · unranked

4 citations

Molly Johnson, Cynthia M. Visness, Agustin Calatroni, Mathew C Altman, Tomasz Janczyk +15 more

The Associations of Maternal Health Characteristics, Newborn Metabolite Concentrations, and Child Body Mass Index among US Children in the ECHO Program

Metabolites(2023)10.3390/metabo13040510

Top 62%

0.225DataRank

Top 62%3 citations

Tebeb Gebretsadik, Nina B. Rohrig, Pingsheng Wu, William D. Dupont, Dana Dabelea +9 more

Future Directions in Early Cystic Fibrosis Lung Disease Research: An NHLBI Workshop Report

UNC Libraries(2020)10.17615/5b7f-j030

N/A

0.208DataRank · unranked

3 citations

Frank J. Accurso, Michael R. Knowles, John F. Engelhardt, Bonnie W. Ramsey, Susan V. Lynch +12 more

Racial and ethnic differences in prenatal exposure to environmental phenols and parabens in the ECHO Cohort

Journal of Exposure Science & Environmental Epidemiology(2025)10.1038/s41370-025-00750-w

N/A

0.208DataRank · unranked

3 citations

Sudhi Upadhyaya, Adaeze W. Nzegwu, Jordan R. Kuiper, Jessie P. Buckley, Judy L. Aschner +92 more

Association of citrulline concentration at birth with lower respiratory tract infection in infancy: Findings from a multi-site birth cohort study

Frontiers in Pediatrics(2022)10.3389/fped.2022.979777

N/A

0.208DataRank · unranked

3 citations

Tebeb Gebretsadik, Kedir N. Turi, Christopher G. McKennan, Suzanne Havstad, Daniel J. Jackson +13 more

Progression of C-reactive protein from birth through preadolescence varies by mode of delivery

Frontiers in Pediatrics(2023)10.3389/fped.2023.1155852

N/A

0.165DataRank · unranked

2 citations

Christine Cole Johnson, Albert M. Levin, Susan V. Lynch, Dennis R. Ownby, Andrew Rundle +5 more

The relationship between the early-life gastrointestinal microbiome and childhood nocturnal cough

Journal of Allergy and Clinical Immunology(2025)10.1016/j.jaci.2025.01.006

N/A

0.104DataRank · unranked

1 citations

Tengfei Ma, Alexandra R. Sitarik, Ze Meng, Dennis R. Ownby, Andrea E. Cassidy‐Bushrow +6 more

COVID-19 Pandemic Exposure and Toddler Behavioral Health in the ECHO Program

JAMA Network Open(2025)10.1001/jamanetworkopen.2025.30346

N/A

0.104DataRank · unranked

1 citations

Marie L. Churchill, Monica McGrath, Akram N. Alshawabkeh, Michelle Bosquet Enlow, Patricia A. Brennan +89 more

Maternal Cardiometabolic Risk Factors in Pregnancy and Offspring Blood Pressure at Age 2 to 18 Years

JAMA Network Open(2025)10.1001/jamanetworkopen.2025.9205

N/A

0DataRank · unranked

6 citations

Ako Adams Ako, Sarah Dee Geiger, Caitlin G. Howe, Wei Perng, Rachana Singh +94 more

Early-life wheeze trajectories are associated with distinct asthma transcriptomes later in life

Journal of Allergy and Clinical Immunology(2025)10.1016/j.jaci.2025.03.020

N/A

0DataRank · unranked

5 citations

Krishna M. Roskin, Jeffrey Burkle, Wan-Chi Chang, Lisa J. Martin, Jocelyn M. Biagini Myers +25 more

Genotypes in the 17q12‐q21 asthma risk locus and early‐life viral wheezing illnesses

Pediatric Allergy and Immunology(2025)10.1111/pai.70165

N/A

0DataRank · unranked

1 citations

Tebeb Gebretsadik, Sweta Singh, Lisa Gress, Eneida A. Mendonca, Brittney M. Snyder +18 more

Viable bacterial colonization is highly limited in the human intestine in utero

Nature Medicine(2020)10.1038/s41591-020-0761-3

N/A

0DataRank · unranked

320 citations

Joanna Halkias, Elle Fukui, V. F. Mendoza, Clive Hayzelden, Emily Crawford +4 more

Associations between a novel measure of sleep health and cognitive functioning in middle childhood: a crosssectional Environmental Influences on Child Health Outcomes cohort study

SLEEP Advances(2025)10.1093/sleepadvances/zpaf049

N/A

0DataRank · unranked

0 citations

Matthew Ferrell, Yingjia Wei, Kelly Glazer Baron, Courtney K. Blackwell, Anat Sigal +91 more

The human microbiome in the 21st century

Nature Communications(2020)10.1038/s41467-020-18983-8

N/A

0DataRank · unranked

93 citations

Susan V. Lynch, Elze Rackaityte

Expression quantitative trait locus fine mapping of the 17q12–21 asthma locus in African American children: a genetic association and gene expression study

The Lancet Respiratory Medicine(2020)10.1016/s2213-2600(20)30011-4

N/A

0DataRank · unranked

72 citations

Chris McKennan, Kevin M. Magnaye, Matthew C. Altman, Charles W. Washington, Catherine T. Stanhope +92 more

Fetal and early postnatal lead exposure measured in teeth associates with infant gut microbiota

Environment International(2020)10.1016/j.envint.2020.106062

N/A

0DataRank · unranked

45 citations

Manish Arora, Christine Austin, Lawrence F. Bielak, Shoshannah Eggers, Christine Cole Johnson +6 more

Cervicovaginal Microbiome Composition Is Associated with Metabolic Profiles in Healthy Pregnancy

mBio(2020)10.1128/mbio.01851-20

N/A

0DataRank · unranked

57 citations

Brandon LaMere, Claudia Weihe, Stephen Wandro, Karen L. Lindsay, Pathik D. Wadhwa +10 more

Maternal and cord blood vitamin D level and the infant gut microbiota in a birth cohort study

Maternal Health Neonatology and Perinatology(2020)10.1186/s40748-020-00119-x

N/A

0DataRank · unranked

15 citations

Alexandra R. Sitarik, Albert M. Levin, Susan V. Lynch, Suzanne Havstad, Kei E. Fujimura +7 more

Distinct lung microbiota associate with HIV-associated chronic lung disease in children

Scientific Reports(2020)10.1038/s41598-020-73085-1

N/A

0DataRank · unranked

13 citations

Douglas Fadrosh, Meera K. Shenoy, Din L. Lin, Kole Lynch, Kathryn McCauley +7 more

Significance of the microbiome in obstructive lung disease

UNC Libraries(2020)10.17615/ay17-z315

N/A

0DataRank · unranked

0 citations

John R. Erb‐Downward, Gary B. Huffnagle, Vincent B. Young, Yvonne J. Huang, Jeffrey L. Curtis +10 more

Maternal gut microbiome regulates immunity to RSV infection in offspring

The Journal of Experimental Medicine(2021)10.1084/jem.20210235

N/A

0DataRank · unranked

55 citations

Carrie‐Anne Malinczak, Kei E. Fujimura, Danny Li, Kathryn McCauley, Jia Li +11 more

Microbiota, Epigenetics, and Trained Immunity. Convergent Drivers and Mediators of the Asthma Trajectory from Pregnancy to Childhood

American Journal of Respiratory and Critical Care Medicine(2021)10.1164/rccm.202010-3779pp

N/A

0DataRank · unranked

40 citations

Donata Vercelli, Susan V. Lynch

Moraxella-dominated pediatric nasopharyngeal microbiota associate with upper respiratory infection and sinusitis

PLoS ONE(2021)10.1371/journal.pone.0261179

N/A

0DataRank · unranked

28 citations

Gregory P. DeMuri, Kole Lynch, Douglas Fadrosh, Clark A. Santee, Nabeetha N. Nagalingam +3 more

Unconjugated bilirubin is associated with protection from early-life wheeze and childhood asthma

Journal of Allergy and Clinical Immunology(2021)10.1016/j.jaci.2020.12.639

N/A

0DataRank · unranked

26 citations

Christopher G. McKennan, Tebeb Gebretsadik, Brittney M. Snyder, Christine M. Seroogy, Robert F. Lemanske +10 more

Strain-resolved analysis in a randomized trial of antibiotic pretreatment and maintenance dose delivery mode with fecal microbiota transplant for ulcerative colitis

medRxiv(2021)10.1101/2021.08.07.21261556

N/A

0DataRank · unranked

4 citations

Yvette M. Piceno, Martin Zydek, Bing Zhang, Lara Aboud Syriani, Jonathan P. Terdiman +6 more

Maternal prenatal immunity, neonatal trained immunity, and early airway microbiota shape childhood asthma development

Allergy(2022)10.1111/all.15442

N/A

0DataRank · unranked

50 citations

Kathryn McCauley, Douglas Fadrosh, Kei E. Fujimura, Debra A. Stern, Susan V. Lynch +2 more

Topical Glaucoma Therapy Is Associated With Alterations of the Ocular Surface Microbiome

Investigative Ophthalmology & Visual Science(2022)10.1167/iovs.63.9.32

N/A

0DataRank · unranked

41 citations

Karina Somohano, Christine Zemsky, Anne‐Catrin Uhlemann, Jeffrey M. Liebmann, George A. Cioffi +4 more

Pneumonia surveillance with culture-independent metatranscriptomics in HIV-positive adults in Uganda: a cross-sectional study

The Lancet Microbe(2022)10.1016/s2666-5247(21)00357-8

N/A

0DataRank · unranked

15 citations

Joshua Bloomstein, Saharai Caldera, Abdul Sessolo, Kathryn McCauley, Patrick Byanyima +17 more

Mild SARS-CoV-2 infection results in long-lasting microbiota instability

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.07.519508

N/A

0DataRank · unranked

11 citations

Rahul Suryawanshi, Preston Tasoff, Maria McCavitt-Malvido, G. Renuka Kumar, Victoria Murray +11 more

The impact of prenatal dog keeping on infant gut microbiota development

Clinical & Experimental Allergy(2023)10.1111/cea.14303

N/A

0DataRank · unranked

38 citations

Alexandra R. Sitarik, Doug Fadrosh, Suzanne Havstad, Kyra Jones, Brent Davidson +10 more

Mild SARS-CoV-2 infection results in long-lasting microbiota instability

mBio(2023)10.1128/mbio.00889-23

N/A

0DataRank · unranked

37 citations

Rahul K. Suryawanshi, Preston Tasoff, Maria McCavitt-Malvido, Renuka Kumar, Victoria Murray +11 more

Contributions of the early-life microbiome to childhood atopy and asthma development

Seminars in Immunology(2023)10.1016/j.smim.2023.101795

N/A

0DataRank · unranked

12 citations

Jacqueline Moltzau Anderson, Susan V. Lynch, Holly Steininger

The gut–airway microbiome axis in health and respiratory diseases

Nature Reviews Microbiology(2024)10.1038/s41579-024-01048-8

N/A

0DataRank · unranked

107 citations

Susan V. Lynch, Mustafa Özçam

12,13‐diHOME Promotes Inflammatory Macrophages and Epigenetically Modifies Their Capacity to Respond to Microbes and Allergens

Journal of Immunology Research(2024)10.1155/2024/2506586

N/A

0DataRank · unranked

13 citations

Kevin M. Magnaye, Cara E. Porsche, Sophia Levan, Elze Rackaityte, Mustafa Özçam +2 more

Enhanced Gut Microbiome Capacity for Amino Acid Metabolism is associated with Peanut Oral Immunotherapy Failure

medRxiv(2024)10.1101/2024.07.15.24309840

N/A

0DataRank · unranked

1 citations

Din L. Lin, Chhedi Lal Gupta, Allison Li, Lisa M. Wheatley, Carolyn Baloh +4 more

Gut microbial bile and amino acid metabolism associate with peanut oral immunotherapy failure

Nature Communications(2025)10.1038/s41467-025-61161-x

N/A

0DataRank · unranked

12 citations

Din L. Lin, Chhedi Lal Gupta, Allison Li, Jonathan Astor Gomez, Lisa M. Wheatley +5 more

Child Opportunity Index at birth and asthma with recurrent exacerbations in the US ECHO program

Journal of Allergy and Clinical Immunology(2025)10.1016/j.jaci.2025.02.036

N/A

0DataRank · unranked

6 citations

Holly B. Schuh, Aruna Chandran, Rima Habre, Jyoti Angal, Izzuddin M. Aris +91 more

Susan V. Lynch

Indexed papers

Top data-sharing exemplar

Papers