Jonathan K. Watts

University of Massachusetts Chan Medical School

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 43 papers. Top paper: “5′-Modifications improve potency and efficacy of DNA donors for precision genome editing”.

5′-Modifications improve potency and efficacy of DNA donors for precision genome editing

eLife(2021)10.7554/elife.72216

N/A

2.1DataRank · unranked

72 citations

Zexiang Chen, Aamir Mir, Gregoriy A. Dokshin, Pranathi M. Krishnamurthy, Yeonsoo Yoon +15 more

Divalent siRNAs are bioavailable in the lung and efficiently block SARS-CoV-2 infection

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2219523120

N/A

1.2DataRank · unranked

48 citations

Minwook Shin, Ching‐Wen Chang, Daniel O’Reilly, Annabelle Biscans, Ken Yamada +41 more

Poly(GR) and poly(GA) in cerebrospinal fluid as potential biomarkers for C9ORF72-ALS/FTD

Nature Communications(2022)10.1038/s41467-022-30387-4

N/A

1.1DataRank · unranked

54 citations

Denitza Raitcheva, Daniel A. Bartlett, Mercedes Prudencio, Diane McKenna‐Yasek, Catherine Douthwright +12 more

Self-delivering, chemically modified CRISPR RNAs for AAV co-delivery and genome editing in vivo

Nucleic Acids Research(2023)10.1093/nar/gkad1125

N/A

0.563DataRank · unranked

17 citations

Karen Kelly, Jonathan Lee, Dimas Echeverria, David Cooper, Rebecca Panwala +13 more

Antisense oligonucleotide jacifusen for FUS-ALS: an investigator-initiated, multicentre, open-label case series

The Lancet(2025)10.1016/s0140-6736(25)00513-6

N/A

0.538DataRank · unranked

35 citations

Matthew B. Harms, Vladislav A. Korobeynikov, Olivia M. Rifai, Benjamin N. Hoover, Elizabeth A. Harrington +30 more

Domain-inlaid Nme2Cas9 adenine base editors with improved activity and targeting scope

Nature Communications(2024)10.1038/s41467-024-45763-5

N/A

0.517DataRank · unranked

15 citations

Han Zhang, Xiaolong Dong, Haoyang Cheng, Nicholas Gaston, Hailey Feinzig +7 more

TDP-43-dependent mis-splicing of KCNQ2 triggers intrinsic neuronal hyperexcitability in ALS/FTD

Nature Neuroscience(2025)10.1038/s41593-025-02096-w

N/A

0.442DataRank · unranked

18 citations

Kelly A. Marshall, Peter Harley, Jacob R. Mann, Francesco Alessandrini, Carlos G. Vanoye +32 more

Quantifying and Mitigating Motor Phenotypes Induced by Antisense Oligonucleotides in the Central Nervous System

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.14.431096

N/A

0.434DataRank · unranked

17 citations

Julia M Rembetsy-Brown, Feng Wang, Pranathi M. Krishnamurthy, Alexandra Weiss, Miklós Marosföi +7 more

Structure of the catalytically active APOBEC3G bound to a DNA oligonucleotide inhibitor reveals tetrahedral geometry of the transition state

Nature Communications(2022)10.1038/s41467-022-34752-1

N/A

0.425DataRank · unranked

16 citations

Adam K. Hedger, Wazo Myint, Vanivilasini Balachandran, Jonathan K. Watts, Celia A. Schiffer +2 more

A combinatorial approach for achieving CNS-selective RNAi

Nucleic Acids Research(2024)10.1093/nar/gkae100

N/A

0.385DataRank · unranked

12 citations

Bruno M.D.C. Godinho, Dimas Echeverria, Matthew Hassler, Lorenc Vangjeli, Jacquelyn Sousa +8 more

Harnessing nucleic acid technologies for human health on earth and in space

Life Sciences in Space Research(2022)10.1016/j.lssr.2022.08.006

N/A

0.292DataRank · unranked

6 citations

Jonathan K. Watts, Samantha L. Sarli

Next generation APOBEC3 inhibitors: optimally designed for potency and nuclease stability

Nucleic Acids Research(2025)10.1093/nar/gkaf234

N/A

0.241DataRank · unranked

4 citations

Wazo Myint, Jeong Min Lee, Diego Suchenski Loustaunau, Vanivilasini Balachandran, Ala M. Shaqra +5 more

Structure of the catalytically active APOBEC3G bound to a DNA oligonucleotide inhibitor reveals tetrahedral geometry of the transition state

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.15.504001

N/A

0.208DataRank · unranked

3 citations

Adam K. Hedger, Wazo Myint, Vanivilasini Balachandran, Jonathan K. Watts, Celia A. Schiffer +2 more

Formamide significantly enhances the efficiency of chemical adenylation of RNA sequencing ligation adaptors

RNA(2023)10.1261/rna.079521.122

N/A

0.104DataRank · unranked

1 citations

Adam K. Hedger, Ken Yamada, Jonathan K. Watts, Anastasia Khvorova, Samuel Hildebrand

EZH2 inhibition reactivates epigenetically silenced FMR1 and normalizes molecular and electrophysiological abnormalities in fragile X syndrome neurons

Frontiers in Neuroscience(2024)10.3389/fnins.2024.1348478

N/A

0.104DataRank · unranked

1 citations

Sara K. Evans, Pranathi M. Krishnamurthy, Feng Wang, Paola Rodrı́guez, Shahid Banday +5 more

A Fluorescent Reporter Mouse for In Vivo Assessment of Genome Editing with Diverse Cas Nucleases and Prime Editors

The CRISPR Journal(2023)10.1089/crispr.2023.0048

N/A

0DataRank · unranked

7 citations

Suet‐Yan Kwan, Aamir Mir, Max D. Hazeltine, Minwook Shin, Shun‐Qing Liang +11 more

Double Click: Unexpected 1:2 Stoichiometry in a Norbornene–Tetrazine Reaction

The Journal of Organic Chemistry(2023)10.1021/acs.joc.2c02861

N/A

0DataRank · unranked

3 citations

Adam K. Hedger, Richard J. Whitby, Jonathan K. Watts, Gitali Devi

Self-delivering CRISPR RNAs for AAV Co-delivery and Genome Editing in vivo

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.20.533459

N/A

0DataRank · unranked

1 citations

Karen Kelly, Jonathan Lee, Dimas Echeverria, David Cooper, Rebecca Panwala +11 more

Engineering Nme2Cas9 Adenine Base Editors with Improved Activity and Targeting Scope

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.14.536905

N/A

0DataRank · unranked

0 citations

Han Zhang, Xiaolong Dong, Nicholas Gaston, Haoyang Cheng, Karen Kelly +5 more

Increasing intracellular dNTP levels improves prime editing efficiency

Nature Biotechnology(2024)10.1038/s41587-024-02405-x

N/A

0DataRank · unranked

29 citations

Karthikeyan Ponnienselvan, Thomas Nyalile, Sarah Oikemus, Anya T. Joynt, Sukanya Iyer +18 more

Quantifying and mitigating motor phenotypes induced by antisense oligonucleotides in the central nervous system

Molecular Therapy(2024)10.1016/j.ymthe.2024.10.024

N/A

0DataRank · unranked

26 citations

Julia M Rembetsy-Brown, Samantha L. Sarli, Holly R McEachern, Feng Wang, Masahiro Ohara +12 more

Preventing acute neurotoxicity of CNS therapeutic oligonucleotides with the addition of Ca2+ and Mg2+ in the formulation

Molecular Therapy — Nucleic Acids(2024)10.1016/j.omtn.2024.102359

N/A

0DataRank · unranked

20 citations

Joseph Paquette, Alexandra Barker, Ellen Sapp, Nicholas McHugh, Brianna Bramato +10 more

Quantifying the activity profile of ASO and siRNA conjugates in glioblastoma xenograft tumors in vivo

Nucleic Acids Research(2024)10.1093/nar/gkae260

N/A

0DataRank · unranked

18 citations

Hassan H. Fakih, Karen Kelly, Gitali Devi, Julia M Rembetsy-Brown, Holly R McEachern +8 more

Next generation APOBEC3 inhibitors: Optimally designed for potency and nuclease stability

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.05.611238

N/A

0DataRank · unranked

3 citations

Wazo Myint, Jeong Min Lee, Diego Suchenski-Loustaunau, Vanivilasini Balachandran, Ala M. Shaqra +5 more

Preventing acute neurotoxicity of CNS therapeutic oligonucleotides with the addition of Ca2+ and Mg2+ in the formulation

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.06.597639

N/A

0DataRank · unranked

1 citations

Joseph Paquette, Alexandra Barker, Ellen Sapp, Nicholas McHugh, Brianna Bramato +10 more

Efficient convergent synthesis of 1,3-diazepinone nucleosides by ring-closing metathesis and direct glycosylation

RSC Advances(2024)10.1039/d4ra07318e

N/A

0DataRank · unranked

0 citations

Jonathan Findell, Dinesh S. Barak, Celia A. Schiffer, Jonathan K. Watts, Akbar Ali +1 more

Identifying optimal conditions for precise knock-in of exogenous DNA into the zebrafish genome

Development(2025)10.1242/dev.204571

N/A

0DataRank · unranked

4 citations

Kai Hu, Masahiro Shin, Feston Idrizi, Aliece Goodman‐Khan, Amy Kolb +8 more

Detecting chromatin interactions between and along sister chromatids with SisterC

Nature Methods(2020)10.1038/s41592-020-0930-9

N/A

0DataRank · unranked

55 citations

Adam K. Hedger, Jonathan K. Watts, Job Dekker, Marlies E. Oomen

Pervasive noise in human splice site selection

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.16.665169

N/A

0DataRank · unranked

2 citations

Kaitlyn Brokaw, Zachary J. Kartje, Valeria C. Sanabria, Nida Javeed, Ayush Kumar +3 more

SisterC: A novel 3C-technique to detect chromatin interactions between and along sister chromatids

(2020)10.21203/rs.3.pex-1021/v1

N/A

0DataRank · unranked

0 citations

Adam K. Hedger, Jonathan K. Watts, Job Dekker, Marlies E. Oomen

Suppression of mutant C9orf72 expression by a potent mixed backbone antisense oligonucleotide

Nature Medicine(2021)10.1038/s41591-021-01557-6

N/A

0DataRank · unranked

175 citations

Michael P. Moazami, Huiya Yang, Diane McKenna‐Yasek, Catherine Douthwright, Courtney Pinto +16 more

The NIH Somatic Cell Genome Editing program

Nature(2021)10.1038/s41586-021-03191-1

N/A

0DataRank · unranked

132 citations

Erik J. Sontheimer, Philip J. Brooks, Melinda R. Dwinell, Charles A. Gersbach, David R. Liu +70 more

Quantification of Antisense Oligonucleotides by Splint Ligation and Quantitative Polymerase Chain Reaction

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.05.447195

N/A

0DataRank · unranked

0 citations

Pranathi M. Krishnamurthy, Jonathan K. Watts, Minwook Shin

Adenine Base Editing In Vivo with a Single Adeno-Associated Virus Vector

GEN Biotechnology(2022)10.1089/genbio.2022.0015

N/A

0DataRank · unranked

68 citations

Nathan Bamidele, Pengpeng Liu, Ogooluwa Ojelabi, Xin D. Gao, Tomás Rodríguez +9 more

Genome-wide detection of CRISPR editing in vivo using GUIDE-tag

Nature Communications(2022)10.1038/s41467-022-28135-9

N/A

0DataRank · unranked

58 citations

Pengpeng Liu, Jordan L. Smith, Esther Mintzer, Stacy A. Maitland, Xiaolong Dong +9 more

Intratracheally administered LNA gapmer antisense oligonucleotides induce robust gene silencing in mouse lung fibroblasts

Nucleic Acids Research(2022)10.1093/nar/gkac630

N/A

0DataRank · unranked

29 citations

Io Long Chan, Yuming Cao, Alisha M. Gruntman, Jonathan Lee, Jacquelyn Sousa +17 more

G-rich motifs within phosphorothioate-based antisense oligonucleotides (ASOs) drive activation of FXN expression through indirect effects

Nucleic Acids Research(2022)10.1093/nar/gkac1108

N/A

0DataRank · unranked

10 citations

Ezequiel Calvo-Roitberg, Julia M Rembetsy-Brown, Minggang Fang, Jacquelyn Sousa, Zachary J. Kartje +6 more

Structure of the catalytically active APOBEC3G bound to a DNA oligonucleotide inhibitor reveals tetrahedral geometry of the transition state

Research Square(2022)10.21203/rs.3.rs-1964780/v1

N/A

0DataRank · unranked

2 citations

Adam K. Hedger, Wazo Myint, Vanivilasini Balachandran, Jonathan K. Watts, Celia A. Schiffer +2 more

Formamide significantly enhances the efficiency of chemical adenylation of RNA sequencing ligation adaptors

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.16.516815

N/A

0DataRank · unranked

0 citations

Adam K. Hedger, Jonathan K. Watts, Anastasia Khvorova, Samuel Hildebrand

Targeted genome editing with a DNA-dependent DNA polymerase and exogenous DNA-containing templates

Nature Biotechnology(2023)10.1038/s41587-023-01947-w

N/A

0DataRank · unranked

59 citations

Xiaolong Dong, Chunwei Zheng, David G. Keener, Zexiang Chen, Haoyang Cheng +4 more

Antisense oligonucleotide rescue of CGG expansion–dependent FMR1 mis-splicing in fragile X syndrome restores FMRP

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2302534120

N/A

0DataRank · unranked

53 citations

Kevin J. Sharp, Sithara Raju Ponny, Jonathan Lee, Jonathan K. Watts, Elizabeth Berry‐Kravis +2 more

In Vivo Prime Editing by Lipid Nanoparticle Co-Delivery of Chemically Modified pegRNA and Prime Editor mRNA

GEN Biotechnology(2023)10.1089/genbio.2023.0045

N/A

0DataRank · unranked

33 citations

Karen Kelly, Haoyang Cheng, Xiaolong Dong, Adam K. Hedger, Li Li +3 more

Dendritic amphiphilic siRNA: Selective albumin binding, in vivo efficacy, and low toxicity

Molecular Therapy — Nucleic Acids(2023)10.1016/j.omtn.2023.102080

N/A

0DataRank · unranked

20 citations

Qi Tang, Ashley Summers, Minwook Shin, Julianna Buchwald, Rosemary Gagnon +7 more