Caitlyn L. Holmes

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 14 papers. Top paper: “A plasmid locus associated with Klebsiella clinical infections encodes a microbiome-dependent gut fitness factor”.

A plasmid locus associated with Klebsiella clinical infections encodes a microbiome-dependent gut fitness factor

PLoS Pathogens(2021)10.1371/journal.ppat.1009537

N/A

0.590DataRank · unranked

50 citations

Christine M. Bassis, Srividya Ramakrishnan, Robert Hein, Sophia Mason, Yehudit Bergman +9 more

Combined comparative genomics and clinical modeling reveals plasmid-encoded genes are independently associated with Klebsiella infection

Nature Communications(2022)10.1038/s41467-022-31990-1

N/A

0DataRank · unranked

32 citations

Emily Roberts, Lavinia V. Unverdorben, Sophia Mason, Alieysa Patel, Ryan Crawford +11 more

The ADP-Heptose Biosynthesis Enzyme GmhB is a Conserved Gram-Negative Bacteremia Fitness Factor

Infection and Immunity(2022)10.1128/iai.00224-22

N/A

0DataRank · unranked

22 citations

Sara N. Smith, Stephen J. Gurczynski, Geoffrey B. Severin, Lavinia V. Unverdorben, Jay Vornhagen +3 more

Comparative genomics reveals plasmid-encoded genes associated with Klebsiella infection in colonized patients

Research Square(2022)10.21203/rs.3.rs-1254643/v1

N/A

0DataRank · unranked

0 citations

Emily Roberts, Lavinia V. Unverdorben, Sophia Mason, Alieysa Patel, Ryan Crawford +11 more

Klebsiella pneumoniae causes bacteremia using factors that mediate tissue-specific fitness and resistance to oxidative stress

PLoS Pathogens(2023)10.1371/journal.ppat.1011233

N/A

0DataRank · unranked

40 citations

Alexis E. Wilcox, Valerie S. Forsyth, Sara N. Smith, Bridget S. Moricz, Lavinia V. Unverdorben +6 more

Macrophage extracellular traps require peptidylarginine deiminase 2 and 4 and are a source of citrullinated antigens bound by rheumatoid arthritis autoantibodies

Frontiers in Immunology(2024)10.3389/fimmu.2024.1167362

N/A

0DataRank · unranked

38 citations

Caitlyn L. Holmes, Miriam A. Shelef, S. Janna Bashar

Fitness factor genes conserved within the multi-species core genome of Gram-negative Enterobacterales species contribute to bacteremia pathogenesis

PLoS Pathogens(2024)10.1371/journal.ppat.1012495

N/A

0DataRank · unranked

8 citations

Mark T. Anderson, Bridget S. Moricz, Geoffrey B. Severin, Caitlyn L. Holmes, Elizabeth N. Ottosen +14 more

Type-2 diabetes mellitus enhances Klebsiella pneumoniae pathogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.31.596766

N/A

0DataRank · unranked

6 citations

Krista Gunter, James M. Bowen, Caitlyn L. Holmes, Natasha L. Tilston-Lunel, Jay Vornhagen +1 more

Arginine Regulates the Mucoid Phenotype of Hypervirulent Klebsiella pneumoniae

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.20.624485

N/A

0DataRank · unranked

6 citations

Grace E. Shepard, Saroj Khadka, Caitlyn L. Holmes, Michael A. Bachman, Laura A. Mike +1 more

Fitness Factor Genes Conserved within the Multi-species Core Genome of Gram-negative Enterobacterales Species Contribute to Bacteremia Pathogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.18.585282

N/A

0DataRank · unranked

2 citations

Mark T. Anderson, Bridget S. Moricz, Geoffrey B. Severin, Caitlyn L. Holmes, Elizabeth N. Ottosen +14 more

Arginine regulates the mucoid phenotype of hypervirulent Klebsiella pneumoniae

Nature Communications(2025)10.1038/s41467-025-61047-y

N/A

0DataRank · unranked

21 citations

Caitlyn L. Holmes, Andrew J. Stark, Grace E. Shepard, Emma G. Mills, Saroj Khadka +4 more

Integrating genomic and Tn-Seq data to identify common in vivo fitness mechanisms across multiple bacterial species

mBio(2025)10.1128/mbio.01988-25

N/A

0DataRank · unranked

2 citations

Thomas H. Clarke, Geoffrey B. Severin, Aric N. Brown, Elizabeth N. Ottosen, Caitlyn L. Holmes +8 more

Pathogenesis of Gram-Negative Bacteremia

Clinical Microbiology Reviews(2021)10.1128/cmr.00234-20

N/A

0DataRank · unranked

292 citations

Mark T. Anderson, Harry L. T. Mobley, Michael A. Bachman, Caitlyn L. Holmes

Accurate interpretation of within-host dissemination using barcoded bacteria

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.11.687827

N/A

0DataRank · unranked

0 citations

Ting Zhang, Caitlyn L. Holmes, Karthik Hullahalli, Rachel T. Giorgio