Adam M. Novak

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

5.5Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A draft human pangenome reference

Nature(2023)10.1038/s41586-023-05896-x

Top 4%

5.1DataRank

Top 4%1169 citations

Mobin Asri, Jana Ebler, Daniel Doerr, Marina Haukness, Hickey, Glenn +95 more

Papers

Driven by 18 papers — median percentile 73. Top paper: “Progressive Cactus is a multiple-genome aligner for the thousand-genome era”.

Progressive Cactus is a multiple-genome aligner for the thousand-genome era

Nature(2020)10.1038/s41586-020-2871-y

N/A

8.3DataRank · unranked

643 citations

Hickey, Glenn, Mark Diekhans, Ian T. Fiddes, Adam M. Novak, Alden Deran +16 more

A draft human pangenome reference

Nature(2023)10.1038/s41586-023-05896-x

Top 4%

5.1DataRank

Top 4%1169 citations

Mobin Asri, Jana Ebler, Daniel Doerr, Marina Haukness, Hickey, Glenn +95 more

Pangenome graph construction from genome alignments with Minigraph-Cactus

Nature Biotechnology(2023)10.1038/s41587-023-01793-w

N/A

5.0DataRank · unranked

318 citations

Jean Monlong, Jana Ebler, Adam M. Novak, Jordan M. Eizenga, Yan Gao +94 more

Pangenome Graphs

Annual Review of Genomics and Human Genetics(2020)10.1146/annurev-genom-120219-080406

N/A

0.882DataRank · unranked

356 citations

Adam M. Novak, Jonas A. Sibbesen, Simon Heumos, Ali Ghaffaari, Hickey, Glenn +11 more

Genotyping structural variants in pangenome graphs using the vg toolkit

Genome biology(2020)10.1186/s13059-020-1941-7

N/A

0.877DataRank · unranked

346 citations

David N. Heller, Jean Monlong, Jonas A. Sibbesen, Jouni Sirén, Jordan M. Eizenga +5 more

Efficient dynamic variation graphs

Bioinformatics(2020)10.1093/bioinformatics/btaa640

N/A

0.550DataRank · unranked

38 citations

Adam M. Novak, Emily Kobayashi, Flavia Villani, Cecilia Cisar, Simon Heumos +5 more

A strategy for building and using a human reference pangenome

F1000Research(2021)10.12688/f1000research.19630.2

N/A

0.533DataRank · unranked

10 citations

Giuseppe Narzisi, Valérie Schneider, Peter A. Audano, Evan Biederstedt, Lon Blauvelt +35 more

Distance indexing and seed clustering in sequence graphs

Bioinformatics(2020)10.1093/bioinformatics/btaa446

N/A

0.457DataRank · unranked

20 citations

Jordan M. Eizenga, Adam M. Novak, Jouni Sirén, Benedict Paten, Xian Chang

Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100543

Top 50%

0.352DataRank

Top 50%6 citations

Stephanie Greer, Dmitri S. Pavlichin, Bo Zhou, Alexander E. Urban, Tsachy Weissman +94 more

Efficient indexing and querying of annotations in a pangenome graph

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.12.618009

N/A

0.241DataRank · unranked

4 citations

Dickson Chung, Hickey, Glenn, Sarah Djebali, Toshiyuki Yokoyama, Erik Garrison +4 more

Sparstolonin B nano-formulation attenuates LPS-induced lung injury

Frontiers in Pharmacology(2025)10.3389/fphar.2025.1532391

N/A

0DataRank · unranked

3 citations

Xiaojing Wang, Dandan Guo, Hui Zhang, Changying Shi, Adam M. Novak +4 more

Genotyping common, large structural variations in 5,202 genomes using pangenomes, the Giraffe mapper, and the vg toolkit

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.04.412486

N/A

0DataRank · unranked

30 citations

Jean Monlong, Xian Chang, Adam M. Novak, Jordan M. Eizenga, Charles Markello +15 more

Succinct dynamic variation graphs

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.23.056317

N/A

0DataRank · unranked

4 citations

Adam M. Novak, Emily Kobayashi, Flavia Villani, Cecilia Cisar, Simon Heumos +5 more

Pangenomics enables genotyping of known structural variants in 5202 diverse genomes

Science(2021)10.1126/science.abg8871

N/A

0DataRank · unranked

419 citations

Jean Monlong, Xian Chang, Adam M. Novak, Jordan M. Eizenga, Charles Markello +15 more

Haplotype-aware pantranscriptome analyses using spliced pangenome graphs

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.26.437240

N/A

0DataRank · unranked

18 citations

Jordan M. Eizenga, Adam M. Novak, Jouni Sirén, Xian Chang, Erik Garrison +2 more

Haplotype-aware pantranscriptome analyses using spliced pangenome graphs

Nature Methods(2023)10.1038/s41592-022-01731-9

N/A

0DataRank · unranked

82 citations

Jordan M. Eizenga, Adam M. Novak, Jouni Sirén, Xian Chang, Erik Garrison +2 more

Personalized Pangenome References

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.13.571553

N/A

0DataRank · unranked

4 citations

Parsa Eskandar, Matteo Tommaso Ungaro, Hickey, Glenn, Jordan M. Eizenga, Adam M. Novak +7 more

Personalized pangenome references

Nature Methods(2024)10.1038/s41592-024-02407-2

N/A

0DataRank · unranked

30 citations

Parsa Eskandar, Matteo Tommaso Ungaro, Hickey, Glenn, Jordan M. Eizenga, Adam M. Novak +7 more

Adam M. Novak

Indexed papers

Top data-sharing exemplar

Papers