🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Joseph Nasser

Harvard University

ORCID: 0000-0001-5941-5751

Also affiliated with Center for Systems Biology, Brandeis University

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

1.9Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

An encyclopedia of enhancer-gene regulatory interactions in the human genome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.09.563812

Top 11%

1.9DataRank

Top 11%120 citations

Kristy S. Mualim, Alireza Karbalayghareh, Maya U. Sheth, Kushal K. Dey, Evelyn Jagoda +41 more

Papers

Driven by 13 papers — median percentile 89. Top paper: “Inherited causes of clonal haematopoiesis in 97,691 whole genomes”.

Inherited causes of clonal haematopoiesis in 97,691 whole genomes

Nature(2020)10.1038/s41586-020-2819-2

N/A

11.6DataRank · unranked

748 citations

Joshua S. Weinstock, Satish K. Nandakumar, Charles P. Fulco, Erik L. Bao, Seyedeh M. Zekavat +95 more

Genome-wide enhancer maps link risk variants to disease genes

Nature(2021)10.1038/s41586-021-03446-x

N/A

7.7DataRank · unranked

764 citations

Drew T. Bergman, Charles P. Fulco, Philine Guckelberger, Benjamin R. Doughty, Tejal A. Patwardhan +27 more

Leveraging polygenic enrichments of gene features to predict genes underlying complex traits and diseases

medRxiv(2020)10.1101/2020.09.08.20190561

N/A

3.4DataRank · unranked

132 citations

Jacob C. Ulirsch, Nathan Y. Cheng, Brian L. Trippe, Rebecca S. Fine, Jenkai Miao +24 more

An encyclopedia of enhancer-gene regulatory interactions in the human genome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.09.563812

Top 11%

1.9DataRank

Top 11%120 citations

Kristy S. Mualim, Alireza Karbalayghareh, Maya U. Sheth, Kushal K. Dey, Evelyn Jagoda +41 more

KLF4 recruits SWI/SNF to increase chromatin accessibility and reprogram the endothelial enhancer landscape under laminar shear stress

Nature Communications(2022)10.1038/s41467-022-32566-9

N/A

1.8DataRank · unranked

76 citations

James Chappell, Minyi Shi, Tsutomu Shinohara, Dan Li, Maxwell R. Mumbach +12 more

HyPR-seq: Single-cell quantification of chosen RNAs via hybridization and sequencing of DNA probes

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2010738117

N/A

1.6DataRank · unranked

44 citations

Benjamin R. Doughty, Vidya Subramanian, Philine Guckelberger, Qingbo S. Wang, Linlin M. Chen +13 more

Leveraging polygenic enrichments of gene features to predict genes underlying complex traits and diseases

Nature Genetics(2023)10.1038/s41588-023-01443-6

N/A

0.853DataRank · unranked

293 citations

Jacob C. Ulirsch, Nathan Y. Cheng, Brian L. Trippe, Rebecca S. Fine, Jenkai Miao +23 more

KLF4 Recruits SWI/SNF to Increase Chromatin Accessibility and Reprogram the Endothelial Enhancer Landscape under Laminar Shear Stress

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.10.195768

N/A

0.416DataRank · unranked

15 citations

James Chappell, Minyi Shi, Tsutomu Shinohara, Dan Li, Maxwell R. Mumbach +11 more

Combining SNP-to-gene linking strategies to pinpoint disease genes and assess disease omnigenicity

medRxiv(2021)10.1101/2021.08.02.21261488

N/A

0.386DataRank · unranked

7 citations

Omer Weissbrod, Farhad Hormozdiari, Kushal K. Dey, Joseph Nasser, Karthik A. Jagadeesh +8 more

SNP-to-gene linking strategies reveal contributions of enhancer-related and candidate master-regulator genes to autoimmune disease

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.02.279059

N/A

0.345DataRank · unranked

9 citations

Steven Gazal, Bryce van de Geijn, Samuel S. Kim, Joseph Nasser, Jesse M. Engreitz +2 more

Integrative approaches to improve the informativeness of deep learning models for human complex diseases

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.08.288563

N/A

0.241DataRank · unranked

4 citations

Samuel S. Kim, Steven Gazal, Joseph Nasser, Jesse M. Engreitz, Alkes L. Price +1 more

Compatibility logic of human enhancer and promoter sequences

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.23.462170

N/A

0DataRank · unranked

3 citations

Thouis R. Jones, Vincent Liu, Layla Siraj, Helen Kang, Joseph Nasser +7 more

A mathematical model clarifies the ABC Score formula used in enhancer-gene prediction

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.29.626072

N/A

0DataRank · unranked

0 citations

Kee-Myoung Nam, Jeremy Gunawardena, Joseph Nasser