Oscar E. Ospina

Also affiliated with Moffitt Cancer Center, Johns Hopkins All Children's Hospital

Biochemistry, Genetics and Molecular BiologyMedicineEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 14 papers. Top paper: “Challenges and Opportunities in the Statistical Analysis of Multiplex Immunofluorescence Data”.

Challenges and Opportunities in the Statistical Analysis of Multiplex Immunofluorescence Data

Cancers(2021)10.3390/cancers13123031

N/A

0.593DataRank · unranked

51 citations

Oscar E. Ospina, Mary K. Townsend, Jonathan V. Nguyen, Carlos Moran Segura, Joellen M. Schildkraut +4 more

spatialGE: quantification and visualization of the tumor microenvironment heterogeneity using spatial transcriptomics

Bioinformatics(2022)10.1093/bioinformatics/btac145

N/A

0.538DataRank · unranked

35 citations

Christopher M. Wilson, Alex C. Soupir, Anders Berglund, Inna Smalley, Kenneth Y. Tsai +2 more

Branched-chain keto acids promote an immune-suppressive and neurodegenerative microenvironment in leptomeningeal disease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.18.572239

N/A

0DataRank · unranked

1 citations

Yuan Ren, Ronak Kundalia, Hasan Alhaddad, Zhihua Chen, Gerald Wallace +17 more

Spatial transcriptomics analysis identifies a unique tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.18.572266

N/A

0DataRank · unranked

0 citations

Oscar E. Ospina, Mariam Lotfy Khaled, Yuan Ren, Peter Forsyth, Yolanda Piña +7 more

Preexisting Skin-Resident CD8 and γδ T-cell Circuits Mediate Immune Response in Merkel Cell Carcinoma and Predict Immunotherapy Efficacy

Cancer Discovery(2024)10.1158/2159-8290.cd-23-0798

N/A

0DataRank · unranked

25 citations

Yue Zhang, Oscar E. Ospina, Matt D. Nichols, Victoria A. Chu, Álvaro de Mingo Pulido +31 more

Differential gene expression analysis of spatial transcriptomic experiments using spatial mixed models

Scientific Reports(2024)10.1038/s41598-024-61758-0

N/A

0DataRank · unranked

22 citations

Alex C. Soupir, Roberto Manjarres-Betancur, Guillermo González-Calderón, Xiaoqing Yu, Brooke L. Fridley +1 more

Spatial transcriptomics analysis identifies a tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease

Cell Reports Medicine(2024)10.1016/j.xcrm.2024.101606

N/A

0DataRank · unranked

10 citations

Oscar E. Ospina, Mariam Lotfy Khaled, Yuan Ren, Ethan Vallebuona, Mohammad Baraa Boozo +9 more

spatialGE Is a User-Friendly Web Application That Facilitates Spatial Transcriptomics Data Analysis

Cancer Research(2024)10.1158/0008-5472.can-24-2346

N/A

0DataRank · unranked

6 citations

Roberto Manjarres-Betancur, Guillermo Gonzalez-Calderon, Alex C. Soupir, Inna Smalley, Kenneth Y. Tsai +8 more

iModMix : Integrative Module Analysis for Multi-omics Data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.12.623208

N/A

0DataRank · unranked

2 citations

Ashley Lui, Yonatan Ayalew Mekonnen, Vanessa Rubio, Noah Sulman, Christopher M. Wilson +9 more

Differential gene expression analysis of spatial transcriptomic experiments using spatial mixed models

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.20.576348

N/A

0DataRank · unranked

1 citations

Alex C. Soupir, Roberto Manjarres-Betancur, Guillermo González-Calderón, Xiaoqing Yu, Brooke L. Fridley +1 more

scSpatialSIM: a simulator of spatial single-cell molecular data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.08.579486

N/A

0DataRank · unranked

0 citations

Julia Wrobel, Jordan H. Creed, Oscar E. Ospina, Christopher M. Wilson, Brandon J. Manley +3 more

Reproducible Sectioning and Sample Preparation for Mass Spectrometry Imaging of Cancer Metabolism in Frozen Lung Tissue

Methods in molecular biology(2025)10.1007/978-1-0716-4534-5_23

N/A

0DataRank · unranked

2 citations

Hayley D. Ackerman, Nicole Hackel, Christina L. Carr, Jaden R Baldwin, John H. Lockhart +10 more

scSpatialSIM: a simulator of spatial single-cell molecular data

SoftwareX(2025)10.1016/j.softx.2025.102223

N/A

0DataRank · unranked

0 citations

Julia Wrobel, Jordan H. Creed, Oscar E. Ospina, C. M. Wilson, Brandon J. Manley +3 more

spatialGE: Quantification and visualization of the tumor microenvironment heterogeneity using spatial transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.27.454023

N/A

0DataRank · unranked

1 citations

Christopher M. Wilson, Alex C. Soupir, Anders Berglund, Inna Smalley, Kenneth Y. Tsai +2 more