John M. Greally

Also affiliated with Children's Hospital at Montefiore, Institute for Music and Neurologic Function

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 40 papers. Top paper: “Expansion and mechanistic insights into de novo DEAF1 variants in DEAF1-associated neurodevelopmental disorders”.

Expansion and mechanistic insights into de novo DEAF1 variants in DEAF1-associated neurodevelopmental disorders

Human Molecular Genetics(2022)10.1093/hmg/ddac200

N/A

0.373DataRank · unranked

11 citations

Shivakumar Rajamanickam, Sandeep Adhikari, Oluwatosin C Falayi, Theresa A. Wilson, Brian J. Shayota +19 more

Physician and informal care use explained by the Pediatric Quality of Life Inventory (PedsQL) in children with suspected genetic disorders

Quality of Life Research(2024)10.1007/s11136-024-03677-1

N/A

0.104DataRank · unranked

1 citations

Nicole Kelly, Ashley Fisher, Samuel F. Hohmann, Noura S. Abul‐Husn, John M. Greally +6 more

Identification of a novel subgroup of endometrial cancer patients with loss of thyroid hormone receptor beta expression and improved survival

BMC Cancer(2020)10.1186/s12885-020-07325-y

N/A

0DataRank · unranked

6 citations

John M. Greally, Jessica C. Mar, Daniel G. Piqué

The NYCKidSeq project: study protocol for a randomized controlled trial incorporating genomics into the clinical care of diverse New York City children

medRxiv(2020)10.1101/2020.09.02.20186361

N/A

0DataRank · unranked

1 citations

Katie M. Gallagher, Sabrina A. Suckiel, Katherine E. Donohue, Michelle A. Ramos, Nicole Kelly +41 more

GUÍA: a digital platform to facilitate result disclosure in genetic counseling

medRxiv(2020)10.1101/2020.09.14.20194191

N/A

0DataRank · unranked

0 citations

Jaqueline A. Odgis, Katie M. Gallagher, Jessica Rodriguez, Dana Watnick, Gabrielle Bertier +27 more

GenomeDiver: A platform for phenotype-guided medical genomic diagnosis

medRxiv(2020)10.1101/2020.11.22.20236430

N/A

0DataRank · unranked

0 citations

Christian Stolte, Kevin Shi, Faygel Beren, Noura S. Abul‐Husn, Gabrielle Bertier +12 more

Association of genetic variation with disproportionate vitamin A deficiency in pregnant women of certain ethnicities in the United States.

Research Square(2020)10.21203/rs.3.rs-49188/v2

N/A

0DataRank · unranked

0 citations

Tao Wang, Diana Garretto, Carmen R. Isasi, Wellington V. Cardoso, John M. Greally +2 more

Genetic background contributions to the disproportion of vitamin A deficiency in pregnant women of certain ethnicities in populations of the United States.

Research Square(2020)10.21203/rs.3.rs-49188/v1

N/A

0DataRank · unranked

0 citations

Tao Wang, Diana Garretto, Carmen R. Isasi, Wellington V. Cardoso, John M. Greally +2 more

The NYCKidSeq project: study protocol for a randomized controlled trial incorporating genomics into the clinical care of diverse New York City children

Research Square(2020)10.21203/rs.3.rs-64844/v1

N/A

0DataRank · unranked

0 citations

Katie M. Gallagher, Sabrina A. Suckiel, Katherine E. Donohue, Michelle A. Ramos, Nicole Kelly +41 more

The SEQC2 epigenomics quality control (EpiQC) study

Genome biology(2021)10.1186/s13059-021-02529-2

N/A

0DataRank · unranked

60 citations

Jessica Nordlund, Claudia Lalancette, Ting Gong, Michelle Lacey, Samantha Lent +52 more

GUÍA: a digital platform to facilitate result disclosure in genetic counseling

Genetics in Medicine(2021)10.1038/s41436-020-01063-z

N/A

0DataRank · unranked

28 citations

Jaqueline A. Odgis, Katie M. Gallagher, Jessica Rodriguez, Dana Watnick, Gabrielle Bertier +27 more

Cell type-specific chromatin accessibility analysis in the mouse and human brain

Epigenetics(2021)10.1080/15592294.2021.1896983

N/A

0DataRank · unranked

18 citations

Ivana Jarić, Lydia Tesfa, John M. Greally, Masako Suzuki, Marija Kundaković +1 more

Disproportionate Vitamin A Deficiency in Women of Specific Ethnicities Linked to Differences in Allele Frequencies of Vitamin A-Related Polymorphisms

Nutrients(2021)10.3390/nu13061743

N/A

0DataRank · unranked

14 citations

Tao Wang, Diana Garretto, Carmen R. Isasi, Wellington V. Cardoso, John M. Greally +2 more

Disproportionate vitamin A deficiency in pregnant women of specific ethnicities in the United States and ethnic differences in allele frequencies of polymorphisms of vitamin A-related genes

Research Square(2021)10.21203/rs.3.rs-49188/v3

N/A

0DataRank · unranked

4 citations

Tao Wang, Diana Garretto, Carmen R. Isasi, Wellington V. Cardoso, John M. Greally +2 more

The Genomics of Colorectal Cancer in Populations with African and European Ancestry

Cancer Discovery(2022)10.1158/2159-8290.cd-21-0813

N/A

0DataRank · unranked

71 citations

Jessica Lee, Russell W. Madison, Kith Pradhan, Justin Y. Newberg, Carmen R. Isasi +13 more

Detection of mosaic variants using genome sequencing in a large pediatric cohort

American Journal of Medical Genetics Part A(2022)10.1002/ajmg.a.63062

N/A

0DataRank · unranked

14 citations

Katie M. Gallagher, Atteeq U. Rehman, Priya Marathe, Katherine E. Bonini, Monisha Sebastin +21 more

Vitamin D Deficiency During Development Permanently Alters Liver Cell Composition and Function

Frontiers in Endocrinology(2022)10.3389/fendo.2022.860286

N/A

0DataRank · unranked

9 citations

J. Greally, Grace Essilfie-Bondzie, Josephine B. Olivier, Reanna Doña-Termine, John M. Greally +2 more

Master Transcription Regulators and Transcription Factors Regulate Immune-Associated Differences Between Patients of African and European Ancestry With Colorectal Cancer

Gastro Hep Advances(2022)10.1016/j.gastha.2022.01.004

N/A

0DataRank · unranked

7 citations

Hyunjin Kim, Anna Blümel, Ellen Finnegan, Alexander Kel, Taylor V. Thompson +7 more

Epigenetic and Transcriptomic Programming of HSC Quiescence Signaling in Large for Gestational Age Neonates

International Journal of Molecular Sciences(2022)10.3390/ijms23137323

N/A

0DataRank · unranked

6 citations

Arnaud Carrier, Yongmei Zhao, Mickaël Canouil, Mehdi Derhourhi, Emmanuelle Durand +7 more

An optimized approach for multiplexing single-nuclear ATAC-seq using oligonucleotide conjugated antibodies

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.22.521637

N/A

0DataRank · unranked

0 citations

Taylor V. Thompson, Eric Sosa, Hiroko Nomaru, David M. Reynolds, Robert Dubin +6 more

Spliceosome malfunction causes neurodevelopmental disorders with overlapping features

Journal of Clinical Investigation(2023)10.1172/jci171235

N/A

0DataRank · unranked

44 citations

Qin Wang, Allan Bayat, Mark R. Battig, Yijing Zhou, Daniëlle G.M. Bosch +95 more

Molecular diagnostic yield of genome sequencing versus targeted gene panel testing in racially and ethnically diverse pediatric patients

Genetics in Medicine(2023)10.1016/j.gim.2023.100880

N/A

0DataRank · unranked

42 citations

Priya N. Marathe, Nicole R. Kelly, Katherine E. Bonini, Monisha Sebastin, Jacqueline A. Odgis +22 more

Acute Lymphoblastic Leukemia with Myeloid Mutations Is a High-Risk Disease Associated with Clonal Hematopoiesis

Blood Cancer Discovery(2023)10.1158/2643-3230.bcd-23-0106

N/A

0DataRank · unranked

33 citations

Pu Zhang, Jacob Stauber, Ibrahim Aldoss, Adam S. Sperling, Lachelle D. Weeks +30 more

Early-life stress and ovarian hormones alter transcriptional regulation in the nucleus accumbens resulting in sex-specific responses to cocaine

Cell Reports(2023)10.1016/j.celrep.2023.113187

N/A

0DataRank · unranked

14 citations

Ivana Jarić, Fabio Bellia, Heining Cham, John M. Greally, Masako Suzuki +2 more

Using epigenomics to understand cellular responses to environmental influences in diseases

PLoS Genetics(2023)10.1371/journal.pgen.1010567

N/A

0DataRank · unranked

12 citations

Srilakshmi M. Raj, David A. Knowles, John M. Greally, Julia Wattacheril

Identification of copy number variants with genome sequencing: Clinical experiences from the NYCKidSeq program

Clinical Genetics(2023)10.1111/cge.14365

N/A

0DataRank · unranked

6 citations

Amanda Thomas‐Wilson, Priya N. Marathe, Monisha Sebastin, Jacqueline A. Odgis, Miranda Di Biase +24 more

The NYCKidSeq randomized controlled trial: Impact of GUÍA digitally enhanced genetic results disclosure in diverse families

The American Journal of Human Genetics(2023)10.1016/j.ajhg.2023.10.016

N/A

0DataRank · unranked

6 citations

Nicole Kelly, Jacqueline A. Odgis, Katie M. Gallagher, Monisha Sebastin, Katherine E. Bonini +18 more

An optimized approach for multiplexing single-nuclear ATAC-seq using oligonucleotide-conjugated antibodies

Epigenetics & Chromatin(2023)10.1186/s13072-023-00486-7

N/A

0DataRank · unranked

4 citations

Taylor V. Thompson, Eric Sosa, Hiroko Nomaru, David M. Reynolds, Robert Dubin +6 more

Molecular diagnostic yield of genome sequencing versus targeted gene panel testing in racially and ethnically diverse pediatric patients

medRxiv(2023)10.1101/2023.03.18.23286992

N/A

0DataRank · unranked

7 citations

Priya Marathe, Nicole Kelly, Katherine E. Bonini, Monisha Sebastin, Jacqueline A. Odgis +22 more

Egr1 is a sex-specific regulator of neuronal chromatin, synaptic plasticity, and behaviour

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.20.572697

N/A

0DataRank · unranked

7 citations

Eric Purisic, Eduardo F. Gallo, John M. Greally, Masako Suzuki, Marija Kundaković +1 more

The NYCKidSeq randomized controlled trial: Impact of GUÍA digitally enhanced genetic counseling in racially and ethnically diverse families

medRxiv(2023)10.1101/2023.07.05.23292193

N/A

0DataRank · unranked

0 citations

Nicole Kelly, Jacqueline A. Odgis, Katie M. Gallagher, Monisha Sebastin, Katherine E. Bonini +18 more

Physician services and costs after disclosure of diagnostic sequencing results in the NYCKidSeq program

Genetics in Medicine(2023)10.1016/j.gim.2023.101011

N/A

0DataRank · unranked

0 citations

Nicole Kelly, Ashley Fisher, Samuel F. Hohmann, Monisha Sebastin, Miranda Di Biase +14 more

Prenatal vitamin D deficiency exposure leads to long-term changes in immune cell proportions

Scientific Reports(2024)10.1038/s41598-024-70911-8

N/A

0DataRank · unranked

7 citations

Shu Shien Chin, Noriko Sato, Miyu Nishikawa, Kaori Yasuda, Naoyuki Miyasaka +10 more

Employing effective recruitment and retention strategies to engage a diverse pediatric population in genomics research

The American Journal of Human Genetics(2024)10.1016/j.ajhg.2024.10.015

N/A

0DataRank · unranked

4 citations

Katherine E. Bonini, Laura Scarimbolo, Nicole Kelly, Beverly J. Insel, Sabrina A. Suckiel +36 more

Evaluating parental personal utility of pediatric genetic and genomic testing in a diverse, multilingual population

Human Genetics and Genomics Advances(2024)10.1016/j.xhgg.2024.100321

N/A

0DataRank · unranked

1 citations

Sabrina A. Suckiel, Katherine E. Bonini, Nicole Kelly, Laura Scarimbolo, Beverly J. Insel +22 more

Regulatory landscape enrichment analysis (RLEA): a computational toolkit for non-coding variant enrichment and cell type prioritization

BMC Bioinformatics(2024)10.1186/s12859-024-05794-7

N/A

0DataRank · unranked

1 citations

Eric Sosa, Dónal O’Shea, Srilakshmi M. Raj, Cathal Seoighe, John M. Greally +1 more

Patient and providers’ perspectives on using the GUÍA digital tool to enhance genomic results disclosure

Genetics in Medicine Open(2025)10.1016/j.gimo.2025.103451

N/A

0DataRank · unranked

1 citations

Sabrina A. Suckiel, Laura Golfinopoulos, Nicole R. Kelly, Katherine E. Bonini, Priya N. Marathe +15 more

Variant Classification Concordance using the ACMG-AMP Variant Interpretation Guidelines across Nine Genomic Implementation Research Studies

The American Journal of Human Genetics(2020)10.1016/j.ajhg.2020.09.011

N/A

0DataRank · unranked

112 citations

Kathleen Muenzen, Leslie G. Biesecker, Kevin M. Bowling, Gregory M. Cooper, Michael O. Dorschner +25 more

Genetic disease risks of under-represented founder populations in New York City

PLoS Genetics(2025)10.1371/journal.pgen.1011755

N/A

0DataRank · unranked

2 citations

Anthony Griffen, Paul Meissner, Paulette Spencer, Michael D. Cabana, Susan Klugman +7 more

AptCompare: optimized de novo motif discovery of RNA aptamers via HTS-SELEX

Bioinformatics(2020)10.1093/bioinformatics/btaa054

N/A

0DataRank · unranked

19 citations

Christina Kratschmer, Keith E. Maier, John M. Greally, Matthew Levy, Aaron Golden +1 more