Benjamin D. Greenbaum

Also affiliated with The King's College, Cornell University, Weill Cornell Medicine

MedicineImmunology and MicrobiologyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

4.6Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Genomic and transcriptomic analysis of checkpoint blockade response in advanced non-small cell lung cancer

Nature Genetics(2023)10.1038/s41588-023-01355-5

Top 6%

4.0DataRank

Top 6%188 citations

Matthew D. Hellmann, Monica Arniella, Mark Holton, Samuel S. Freeman, Vivek Naranbhai +37 more

Papers

Driven by 45 papers — median percentile 80. Top paper: “Temporal and spatial heterogeneity of host response to SARS-CoV-2 pulmonary infection”.

Temporal and spatial heterogeneity of host response to SARS-CoV-2 pulmonary infection

Nature Communications(2020)10.1038/s41467-020-20139-7

N/A

8.5DataRank · unranked

268 citations

Azfar Neyaz, Annamária Szabolcs, Angela Shih, Jonathan Chen, Vishal Thapar +28 more

Neoantigen quality predicts immunoediting in survivors of pancreatic cancer

Nature(2022)10.1038/s41586-022-04735-9

N/A

4.3DataRank · unranked

204 citations

Zachary Sethna, Luis A. Rojas, Jayon Lihm, Barbara Bravi, Yuval Elhanati +28 more

Genomic and transcriptomic analysis of checkpoint blockade response in advanced non-small cell lung cancer

Nature Genetics(2023)10.1038/s41588-023-01355-5

Top 6%

4.0DataRank

Top 6%188 citations

Matthew D. Hellmann, Monica Arniella, Mark Holton, Samuel S. Freeman, Vivek Naranbhai +37 more

HNRNPM controls circRNA biogenesis and splicing fidelity to sustain cancer cell fitness

eLife(2021)10.7554/elife.59654

N/A

1.9DataRank · unranked

63 citations

Federico Di Tullio, Megan Schwarz, Diana Low, Danny Incarnato, Florence Gay +24 more

Immunology of COVID-19: Current State of the Science

Immunity(2020)10.1016/j.immuni.2020.05.002

N/A

1.1DataRank · unranked

1786 citations

Graham J. Britton, Conor Gruber, Samarth Hegde, Joel Kim, Maria Kuksin +83 more

Pharmacologic modulation of RNA splicing enhances anti-tumor immunity

Cell(2021)10.1016/j.cell.2021.05.038

N/A

0.849DataRank · unranked

286 citations

Emma De Neef, James D. Thomas, Erich Sabio, Benoı̂t Rousseau, Mathieu Gigoux +30 more

COVID-19 in patients with lung cancer

Annals of Oncology(2020)10.1016/j.annonc.2020.06.007

N/A

0.840DataRank · unranked

270 citations

Hira Rizvi, Isabel R. Preeshagul, Jacklynn V. Egger, David Hoyos, Chai Bandlamudi +26 more

Shared Immunogenic Poly-Epitope Frameshift Mutations in Microsatellite Unstable Tumors

Cell(2020)10.1016/j.cell.2020.11.004

N/A

0.803DataRank · unranked

210 citations

Cansu Cimen Bozkus, Theofano Orfanelli, Christopher B. McClain, Caitlin Carr, Timothy O’Donnell +9 more

Clinical and molecular features of acquired resistance to immunotherapy in non-small cell lung cancer

Cancer Cell(2024)10.1016/j.ccell.2023.12.013

N/A

0.788DataRank · unranked

190 citations

Adam J. Schoenfeld, Darwin Ye, George Fromm, Hira Rizvi, Xiang H.-F. Zhang +28 more

Structures, functions and adaptations of the human LINE-1 ORF2 protein

Nature(2023)10.1038/s41586-023-06947-z

N/A

0.728DataRank · unranked

127 citations

Trevor van Eeuwen, David Hoyos, Arthur O. Zalevsky, Egor P. Tchesnokov, Roberto Sánchez +40 more

Computational Prediction and Validation of Tumor-Associated Neoantigens

Frontiers in Immunology(2020)10.3389/fimmu.2020.00027

N/A

0.727DataRank · unranked

126 citations

Benjamin D. Greenbaum, Nina Bhardwaj, Vladimir Roudko

IL-33-activated ILC2s induce tertiary lymphoid structures in pancreatic cancer

Nature(2025)10.1038/s41586-024-08426-5

N/A

0.688DataRank · unranked

97 citations

Abderezak Zebboudj, Hiroshi Yano, Siqi Linsey Zhang, George C. Payne, Adrienne Kaya Chandra +31 more

Fundamental immune–oncogenicity trade-offs define driver mutation fitness

Nature(2022)10.1038/s41586-022-04696-z

N/A

0.663DataRank · unranked

82 citations

Roberta Zappasodi, Isabell Schulze, Zachary Sethna, Kelvin C. de Andrade, Dean F. Bajorin +25 more

Terminal differentiation and persistence of effector regulatory T cells essential for preventing intestinal inflammation

Nature Immunology(2025)10.1038/s41590-024-02075-6

N/A

0.661DataRank · unranked

18 citations

Aazam P. Ghelani, Andrew G. Levine, Stephen Martis, Paolo Giovanelli, Zhong-Min Wang +9 more

Cancer cells restrict immunogenicity of retrotransposon expression via distinct mechanisms

Immunity(2024)10.1016/j.immuni.2024.10.015

N/A

0.622DataRank · unranked

27 citations

Eunae You, Jungeui Hong, David Hoyos, Isabella Del Priore, Kaloyan M. Tsanov +27 more

Reverse Transcriptase Inhibition Disrupts Repeat Element Life Cycle in Colorectal Cancer

Cancer Discovery(2022)10.1158/2159-8290.cd-21-1117

N/A

0.617DataRank · unranked

60 citations

Aparna R. Parikh, Alexander Solovyov, Eunae You, Anupriya S. Kulkarni, Chong Chu +44 more

Temporal and Spatial Heterogeneity of Host Response to SARS-CoV-2 Pulmonary Infection

medRxiv(2020)10.1101/2020.07.30.20165241

N/A

0.574DataRank · unranked

45 citations

Azfar Neyaz, Annamária Szabolcs, Angela Shih, Jonathan Chen, Vishal Thapar +26 more

Hybrid Gene Origination Creates Human-Virus Chimeric Proteins during Infection

Cell(2020)10.1016/j.cell.2020.05.035

N/A

0.574DataRank · unranked

45 citations

Matthew Angel, Yixuan Ma, Elizabeth Sloan, Guojun Wang, Carles Martínez‐Romero +49 more

Clinical and Genomic Characterization of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS CoV-2) Infections in mRNA Vaccinated Health Care Personnel in New York City

Clinical Infectious Diseases(2021)10.1093/cid/ciab886

Top 34%

0.570DataRank

Top 34%7 citations

Karissa Whiting, Anabella Lucca Bianchi, Chester Poon, Rebecca Guest, Tracy McMillen +15 more

Disruption of cellular plasticity by repeat RNAs in human pancreatic cancer

Cell(2024)10.1016/j.cell.2024.09.024

N/A

0.505DataRank · unranked

28 citations

Patrick Danaher, Chenyue Lu, Siyu Sun, Luli S. Zou, Ildiko E. Phillips +24 more

Satellite repeat RNA expression in epithelial ovarian cancer associates with a tumor-immunosuppressive phenotype

Journal of Clinical Investigation(2022)10.1172/jci155931

N/A

0.483DataRank · unranked

24 citations

Siyu Sun, Micayla N. Flores, Emily Berzolla, Eunae You, Ildiko E. Phillips +22 more

Systematic evaluation of AML-associated antigens identifies anti-U5 SNRNP200 therapeutic antibodies for the treatment of acute myeloid leukemia

Nature Cancer(2023)10.1038/s43018-023-00656-2

N/A

0.483DataRank · unranked

24 citations

Jahan Rahman, Caroline Erickson, Eric Wang, Mara Monetti, Zhuoning Li +21 more

Tissue-specific features of the T cell repertoire after allogeneic hematopoietic cell transplantation in human and mouse

Science Translational Medicine(2023)10.1126/scitranslmed.abq0476

N/A

0.457DataRank · unranked

20 citations

Yuval Elhanati, Katherine Nichols, Nicholas R. Waters, Chi L. Nguyen, John Slingerland +39 more

LINE-1 ORF1p Mimics Viral Innate Immune Evasion Mechanisms in Pancreatic Ductal Adenocarcinoma

Cancer Discovery(2025)10.1158/2159-8290.cd-24-1317

N/A

0.406DataRank · unranked

14 citations

Bidish K. Patel, Alexandra S. Rojas, Siyu Sun, Patrick Danaher, Natalie I. Ho +12 more

Molecular Heterogeneity and Immune Infiltration Drive Clinical Outcomes in Upper Tract Urothelial Carcinoma

European Urology(2024)10.1016/j.eururo.2024.10.024

N/A

0.385DataRank · unranked

12 citations

Syed M. Alam, Fengshen Kuo, Ziyu Chen, Wesley Yip, Andrew Katims +34 more

Identification of transcriptional programs using dense vector representations defined by mutual information with GeneVector

Nature Communications(2023)10.1038/s41467-023-39985-2

N/A

0.292DataRank · unranked

6 citations

Zachary Sethna, Samuel S. Freeman, Florian Uhlitz, Viktoria Bojilova, Nicole Rusk +9 more

High-throughput interrogation of immune responses using the Human Immune Profiling Pipeline

STAR Protocols(2023)10.1016/j.xpro.2023.102289

N/A

0.241DataRank · unranked

4 citations

Olga Lyudovyk, Justin Kim, Ya-Hui Lin, Yuval Elhanati, Divij Mathew +7 more

Biomarkers of response to neoadjuvant atezolizumab with gemcitabine and cisplatin in muscle-invasive bladder cancer.

Journal of Clinical Oncology(2022)10.1200/jco.2022.40.16_suppl.4584

N/A

0.165DataRank · unranked

2 citations

Alexander Solovyov, Jayon Lihm, Colleen Quinlan, Karissa Whiting, Hao Li +15 more

T cell epitope mapping reveals immunodominance of evolutionarily conserved regions within SARS-CoV-2 proteome.

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.23.619918

N/A

0.165DataRank · unranked

2 citations

Matthew Brown, Leandra Velazquez, Marcus Thomas, E. A. Wilson, Timothy J. O’Donnell +34 more

Neoantigenic properties of TP53 variants influence cancer risk in individuals with Li-Fraumeni syndrome

EBioMedicine(2025)10.1016/j.ebiom.2025.106065

N/A

0DataRank · unranked

2 citations

Olivier Manches, Jonathan Gaucher, Claire Freyçon, D B Collantes Hoyos, Sandrine Blanchet +14 more

The heterogeneous landscape and early evolution of pathogen-associated CpG dinucleotides in SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.06.074039

N/A

0DataRank · unranked

9 citations

Petr Šulc, Anastassia V. Komarova, Benjamin D. Greenbaum, Rémi Monasson, Simona Cocco +1 more

The Heterogeneous Landscape and Early Evolution of Pathogen-Associated CpG Dinucleotides in SARS-CoV-2

Molecular Biology and Evolution(2021)10.1093/molbev/msab036

N/A

0DataRank · unranked

21 citations

Petr Šulc, Anastassia V. Komarova, Benjamin D. Greenbaum, Rémi Monasson, Simona Cocco +1 more

Probing T-cell response by sequence-based probabilistic modeling

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009297

N/A

0DataRank · unranked

15 citations

Vinod P. Balachandran, Benjamin D. Greenbaum, Aleksandra M. Walczak, Thierry Mora, Rémi Monasson +2 more

Repeats Mimic Pathogen-Associated Patterns Across a Vast Evolutionary Landscape

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.04.467016

N/A

0DataRank · unranked

14 citations

Andrea Di Gioacchino, Alexander Solovyov, Sajid A. Marhon, Siyu Sun, Håvard T. Lindholm +13 more

824 High quality neoantigens are immunoedited in long-term pancreatic cancer survivors

Regular and Young Investigator Award Abstracts(2021)10.1136/jitc-2021-sitc2021.824

N/A

0DataRank · unranked

0 citations

Marta Łuksza, Luis A. Rojas, Kevin C. Soares, Joanne Leung, Jayon Lihm +18 more

Y RNAs are conserved endogenous RIG-I ligands across RNA virus infection and are targeted by HIV-1

iScience(2022)10.1016/j.isci.2022.104599

N/A

0DataRank · unranked

55 citations

Valérie Najburg, Alexander Solovyov, Ramya Gopal, Christopher B. McClain, Petr Šulc +18 more

Impaired humoral immunity is associated with prolonged COVID-19 despite robust CD8 T cell responses

Cancer Cell(2022)10.1016/j.ccell.2022.05.013

N/A

0DataRank · unranked

46 citations

Justin Kim, David Qualls, Madeline A. Hwee, Ya-Hui Lin, Sawsan R. Boutemine +15 more

Personalized RNA neoantigen vaccines stimulate T cells in pancreatic cancer

Nature(2023)10.1038/s41586-023-06063-y

N/A

0DataRank · unranked

1289 citations

Zachary Sethna, Kevin C. Soares, Cristina Olcese, Nan Pang, Erin Patterson +46 more

Novel Genetic Subtypes of Urothelial Carcinoma With Differential Outcomes on Immune Checkpoint Blockade

Journal of Clinical Oncology(2023)10.1200/jco.22.02144

N/A

0DataRank · unranked

18 citations

Mahdi Golkaram, Samuel A. Funt, Hikmat Al‐Ahmadie, Shannon Kaplan, Fan Song +11 more

Trade-offs inside the black box of neoantigen prediction

Immunity(2023)10.1016/j.immuni.2023.10.011

N/A

0DataRank · unranked

2 citations

Benjamin D. Greenbaum, Ning Yao

Data from Reverse Transcriptase Inhibition Disrupts Repeat Element Life Cycle in Colorectal Cancer

(2023)10.1158/2159-8290.c.6549619.v1

N/A

0DataRank · unranked

0 citations

Aparna R. Parikh, Alexander Solovyov, Eunae You, Anupriya S. Kulkarni, Chong Nam Chu +44 more

Distinct genomic and immunologic tumor evolution in germline TP53- driven breast cancers

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.03.588009

N/A

0DataRank · unranked

4 citations

David Hoyos, Renyta Moses, Ryan Hausler, Heena Desai, Anh N. Le +17 more

Mis-splicing-derived neoantigens and cognate TCRs in splicing factor mutant leukemias

Cell(2025)10.1016/j.cell.2025.03.047

N/A

0DataRank · unranked

38 citations

Edie I. Crosse, Emma De Neef, Iñaki Etxeberría, Erich Sabio, Eric Wang +31 more

Chronic Viral Mimicry Induction following p53 Loss Promotes Immune Evasion

Cancer Discovery(2025)10.1158/2159-8290.cd-24-0094

N/A

0DataRank · unranked

19 citations

Sajid A. Marhon, Naïri Tchrakian, Anjelica Hodgson, Helen Loo Yau, Isabela M. Gonzaga +43 more

T cell epitope mapping reveals immunodominance of evolutionarily conserved regions within SARS-CoV-2 proteome

iScience(2025)10.1016/j.isci.2025.113044

N/A

0DataRank · unranked

3 citations

Matthew Brown, Leandra Velazquez, Marcus Thomas, E. A. Wilson, Timothy J. O’Donnell +34 more

Benjamin D. Greenbaum

Indexed papers

Top data-sharing exemplar

Papers