Shou‐Jiang Gao

Also affiliated with UPMC Hillman Cancer Center, University of Pittsburgh Medical Center, Cancer Genetics (United States)

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 45 papers. Top paper: “Signatures of oral microbiome in HIV-infected individuals with oral Kaposi's sarcoma and cell-associated KSHV DNA”.

Signatures of oral microbiome in HIV-infected individuals with oral Kaposi's sarcoma and cell-associated KSHV DNA

PLoS Pathogens(2020)10.1371/journal.ppat.1008114

N/A

1.5DataRank · unranked

48 citations

Tinghe Zhang, Vickie Marshall, Priscila Gonçalves, Ramya Ramaswami, Nazzarena Labò +6 more

Investigating immune and non-immune cell interactions in head and neck tumors by single-cell RNA sequencing

Nature Communications(2021)10.1038/s41467-021-27619-4

N/A

0.858DataRank · unranked

303 citations

Aditi Kulkarni, Anthony R. Cillo, P.M.L. Santos, Anna K. Roble, Sayali Onkar +17 more

Deep learning tackles single-cell analysis—a survey of deep learning for scRNA-seq analysis

Briefings in Bioinformatics(2021)10.1093/bib/bbab531

N/A

0.652DataRank · unranked

76 citations

Zhentao Liu, Tinghe Zhang, Md Musaddaqui Hasib, Yu‐Chiao Chiu, Zhenqing Ye +8 more

Specific Inhibition of Viral MicroRNAs by Carbon Dots-Mediated Delivery of Locked Nucleic Acids for Therapy of Virus-Induced Cancer

ACS Nano(2020)10.1021/acsnano.9b06333

N/A

0.648DataRank · unranked

74 citations

Tingting Li, Zhen Liu, Suzane Ramos da Silva, Wei Shan, Xinquan Zhang +3 more

NAT10-dependent N4‐acetylcytidine modification mediates PAN RNA stability, KSHV reactivation, and IFI16-related inflammasome activation

Nature Communications(2023)10.1038/s41467-023-42135-3

N/A

0.644DataRank · unranked

72 citations

Jing Zhou, Ziyu Wang, Xiangya Ding, Xinyue Ma, Li Wan +4 more

Human Respiratory Syncytial Virus NS2 Protein Induces Autophagy by Modulating Beclin1 Protein Stabilization and ISGylation

mBio(2022)10.1128/mbio.03528-21

N/A

0.510DataRank · unranked

29 citations

Swechha M. Pokharel, Indira Mohanty, Lindsay Grace Miller, Shou‐Jiang Gao, Arthur L. Haas +4 more

Ultrarapid and ultrasensitive detection of SARS‐CoV‐2 antibodies in COVID‐19 patients via a 3D‐printed nanomaterial‐based biosensing platform

Journal of Medical Virology(2022)10.1002/jmv.28075

N/A

0.494DataRank · unranked

26 citations

Fei Zhang, Chunshan Hu, Bin Yuan, Sanjida Jahan, Georgios D. Kitsios +4 more

An Advanced Healthcare Sensing Platform for Direct Detection of Viral Proteins in Seconds at Femtomolar Concentrations via Aerosol Jet 3D‐Printed Nano and Biomaterials

Advanced Materials Interfaces(2024)10.1002/admi.202400005

N/A

0.470DataRank · unranked

22 citations

Fei Zhang, Chunshan Hu, Bin Yuan, Shou‐Jiang Gao, Rahul Panat +1 more

N 6 -Methyladenosine and Reader Protein YTHDF2 Enhance the Innate Immune Response by Mediating DUSP1 mRNA Degradation and Activating Mitogen-Activated Protein Kinases during Bacterial and Viral Infections

mBio(2023)10.1128/mbio.03349-22

N/A

0.442DataRank · unranked

18 citations

Wen Meng, Luping Chen, Xinquan Zhang, Ashley Markazi, Weiming Yuan +3 more

GRWD1-WDR5-MLL2 Epigenetic Complex Mediates H3K4me3 Mark and Is Essential for Kaposi’s Sarcoma-Associated Herpesvirus-Induced Cellular Transformation

mBio(2021)10.1128/mbio.03431-21

N/A

0.312DataRank · unranked

7 citations

Songjian Lu, Lifan Liang, Xian Wang, Li Wan, Tingting Li +8 more

Model Systems of Gammaherpesvirus Infection, Immunity, and Disease

Journal of Medical Virology(2025)10.1002/jmv.70581

N/A

0.165DataRank · unranked

2 citations

Renfeng Li, Kathy H.Y. Shair, Shou‐Jiang Gao, Arundhati Gupta

Cellular and molecular heterogeneities and signatures, and pathological trajectories of fatal COVID-19 lungs defined by spatial single-cell transcriptome analysis

medRxiv(2023)10.1101/2023.02.24.23286388

N/A

0.111DataRank · unranked

1 citations

Wen Meng, Zhentao Liu, Md Musaddaqul Hasib, Hugh Galloway, Suzane Ramos da Silva +13 more

Transformer and graph variational autoencoder to identify microenvironments: A deep learning protocol for spatial transcriptomics

STAR Protocols(2025)10.1016/j.xpro.2025.104206

N/A

0.104DataRank · unranked

1 citations

Yufei Huang, Shou‐Jiang Gao, Yidong Chen, Yu-Fang Jin, Mario Flores +1 more

KSHV hijacks FoxO1 to promote cell proliferation and cellular transformation by antagonizing oxidative stress

Journal of Medical Virology(2023)10.1002/jmv.28676

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0DataRank · unranked

24 citations

Shou‐Jiang Gao, Tingting Li

Immune evasion strategy involving propionylation by the KSHV interferon regulatory factor 1 (vIRF1)

PLoS Pathogens(2023)10.1371/journal.ppat.1011324

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0DataRank · unranked

20 citations

Xuemei Jia, Yujia He, Xinyue Ma, Xiaoyu Qi, Li Wan +4 more

Molecular and immune signatures, and pathological trajectories of fatal COVID‐19 lungs defined by in situ spatial single‐cell transcriptome analysis

Journal of Medical Virology(2023)10.1002/jmv.29009

N/A

0DataRank · unranked

18 citations

Wen Meng, Zhentao Liu, Md Musaddaqul Hasib, Hugh Galloway, Suzane Ramos da Silva +13 more

METTL16 controls Kaposi’s sarcoma-associated herpesvirus replication by regulating S-adenosylmethionine cycle

Cell Death and Disease(2023)10.1038/s41419-023-06121-3

N/A

0DataRank · unranked

18 citations

Wen Meng, Jian Feng, Xinghong Gao, Chao Qin, Pinghui Feng +3 more

Activation of glucocorticoid receptor signaling inhibits KSHV-induced inflammation and tumorigenesis

mBio(2023)10.1128/mbio.03011-23

N/A

0DataRank · unranked

5 citations

Ling Ding, Xian Wang, Yufei Huang, Shou‐Jiang Gao, Luping Chen

METTL16 Controls Kaposi’s Sarcoma-Associated Herpesvirus Replication by Regulating S -Adenosylmethionine Cycle

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.07.544118

N/A

0DataRank · unranked

0 citations

Wen Meng, Jian Feng, Xinghong Gao, Chao Qin, Pinghui Feng +3 more

COVID‐19db linkage maps of cell surface proteins and transcription factors in immune cells

Journal of Medical Virology(2023)10.1002/jmv.28887

N/A

0DataRank · unranked

0 citations

Xiaojun Ma, Shou‐Jiang Gao, Harinder Singh, Hatice U. Osmanbeyoglu, Koushul Ramjattun

Activation of glucocorticoid receptor signaling inhibits KSHV-induced inflammation and tumorigenesis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.10.566578

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0DataRank · unranked

0 citations

Ling Ding, Xian Wang, Yufei Huang, Shou‐Jiang Gao, Luping Chen

Lactylation of RNA m 6 A demethylase ALKBH5 promotes innate immune response to DNA herpesviruses and mpox virus

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2409132121

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0DataRank · unranked

39 citations

Jing Zhou, Yang Gu, Yuheng Chen, Yiming Huang, Jingxin Yang +10 more

The loss of hepatitis B virus receptor NTCP/SLC10A1 in human liver cancer cells is due to epigenetic silencing

Journal of Virology(2024)10.1128/jvi.01187-24

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0DataRank · unranked

5 citations

Cheng‐Der Liu, Liyong Zhang, Xiaoyang Yu, Elena S. Kim, Zhentao Liu +6 more

Rapid and Sensitive Digital Droplet PCR Assays for Detecting HPV16 DNA in Liquid Biopsies

Journal of Medical Virology(2024)10.1002/jmv.70146

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0DataRank · unranked

2 citations

Jian Feng, Carly Reeder, D. Elias, Zhongping Xu, Yufei Huang +5 more

reguloGPT: Harnessing GPT for Knowledge Graph Construction of Molecular Regulatory Pathways

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.27.577521

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0DataRank · unranked

11 citations

Yiming Zeng, Arun Das, Sumin Jo, Tinghe Zhang, Parth Patel +6 more

CASTOR1 phosphorylation as a predictor of survival in male patients with KRAS-mutated lung adenocarcinoma.

Journal of Clinical Oncology(2024)10.1200/jco.2024.42.16_suppl.e20015

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0DataRank · unranked

0 citations

Gabriel Sica, Xian Wang, Tingting Li, Luping Chen, Autumn Gaither‐Davis +5 more

Unraveling CASTOR1's tumor suppressive role: Genetic ablation of CASTOR1 and KRAS-driven mouse model of non-small cell lung cancer.

Journal of Clinical Oncology(2024)10.1200/jco.2024.42.16_suppl.8528

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0DataRank · unranked

0 citations

Shenyu Sun, Suet Kee Loo, Luping Chen, Ling Ding, Tingting Li +5 more

A comparative evaluation of computational models for RNA modification detection using nanopore sequencing with RNA004 chemistry

Briefings in Bioinformatics(2025)10.1093/bib/bbaf404

N/A

0DataRank · unranked

26 citations

Mian Umair Ahsan, Joe Chan, Wen Bo Meng, Shou‐Jiang Gao, Yufei Huang +2 more

Dissection of tumoral niches using spatial transcriptomics and deep learning

iScience(2025)10.1016/j.isci.2025.112214

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0DataRank · unranked

5 citations

Yufang Jin, Yidong Chen, Shou‐Jiang Gao, Yufei Huang, Mario Flores +1 more

A Comparative Evaluation of Computational Models for RNA modification detection using Nanopore sequencing with RNA004 Chemistry

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.03.636352

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0DataRank · unranked

6 citations

Mian Umair Ahsan, Joe Chan, Wen Bo Meng, Shou‐Jiang Gao, Yufei Huang +2 more

CASTOR1 : A Novel Tumor Suppressor Linking mTORC1 and KRAS Pathways in Tumorigenesis and Resistance to KRAS-Targeted Therapies in Non-Small Cell Lung Cancer

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.23.650349

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0DataRank · unranked

2 citations

Ling Ding, Shenyu Sun, Suet Kee Loo, Luping Chen, Tingting Li +5 more

Heterogeneous Activation of Signaling Pathways and Therapeutic Vulnerabilities in KSHV‐Associated Primary Effusion Lymphoma Cell Lines

Journal of Medical Virology(2025)10.1002/jmv.70534

N/A

0DataRank · unranked

0 citations

Luping Chen, Yufei Huang, Shou‐Jiang Gao, Lianna Huang

Oral Microbiome and Inferred Functions Predict Kaposi's Sarcoma Progression

Journal of Medical Virology(2025)10.1002/jmv.70647

N/A

0DataRank · unranked

0 citations

Wen Meng, David Alexander Spellman, Jeffrey N. Martin, Paige M. Bracci, Mike McGrath +3 more

Pseudomonas aeruginosa Stimulates Inflammation and Enhances Kaposi’s Sarcoma Herpesvirus-Induced Cell Proliferation and Cellular Transformation through both Lipopolysaccharide and Flagellin

mBio(2020)10.1128/mbio.02843-20

N/A

0DataRank · unranked

20 citations

Paige M. Bracci, Michael S. McGrath, Shou‐Jiang Gao, Ashley Markazi

Sperm associated antigen 9 promotes oncogenic KSHV-encoded interferon regulatory factor-induced cellular transformation and angiogenesis by activating the JNK/VEGFA pathway

PLoS Pathogens(2020)10.1371/journal.ppat.1008730

N/A

0DataRank · unranked

17 citations

Fei Wang, Jiale Shi, Feng Qi, Yuheng Chen, Xiaoyu Qi +8 more

An oncogenic viral interferon regulatory factor upregulates CUB domain-containing protein 1 to promote angiogenesis by hijacking transcription factor lymphoid enhancer-binding factor 1 and metastasis suppressor CD82

Cell Death and Differentiation(2020)10.1038/s41418-020-0578-0

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0DataRank · unranked

18 citations

Qingxia Wang, Xiaoyu Qi, Hongmei Lü, Yuheng Chen, Jiale Shi +9 more

In Vivo-Restricted and Reversible Malignancy Induced by Human Herpesvirus-8 KSHV: A Cell and Animal Model of Virally Induced Kaposi's Sarcoma

UNC Libraries(2020)10.17615/jhrt-wj62

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0DataRank · unranked

0 citations

Loi͏̈c Vincent, Shahin Rafii, Chelsey Hilsher, Dirk P. Dittmer, Elda M. Duran +9 more

CircRNA ARFGEF1 functions as a ceRNA to promote oncogenic KSHV-encoded viral interferon regulatory factor induction of cell invasion and angiogenesis by upregulating glutaredoxin 3

PLoS Pathogens(2021)10.1371/journal.ppat.1009294

N/A

0DataRank · unranked

45 citations

Xuemei Jia, Fei Wang, Liuxue Sheng, Pengxia Song, Yanhui Cao +6 more

RNF167 activates mTORC1 and promotes tumorigenesis by targeting CASTOR1 for ubiquitination and degradation

Nature Communications(2021)10.1038/s41467-021-21206-3

N/A

0DataRank · unranked

50 citations

Xian Wang, Enguo Ju, Suzane Ramos da Silva, Luping Chen, Xinquan Zhang +3 more

Targeting XPO1 enhances innate immune response and inhibits KSHV lytic replication during primary infection by nuclear stabilization of the p62 autophagy adaptor protein

Cell Death and Disease(2021)10.1038/s41419-020-03303-1

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0DataRank · unranked

36 citations

Shou‐Jiang Gao, Wen Meng

Reversible switching of primary cells between normal and malignant state by oncogenic virus KSHV and CRISPR/Cas9‐mediated targeting of a major viral latent protein

Journal of Medical Virology(2021)10.1002/jmv.27046

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0DataRank · unranked

9 citations

Tingting Li, Suzane Ramos da Silva, Ashley Markazi, Shou‐Jiang Gao, Enguo Ju

Nitric oxide is induced and required for efficient Kaposi's sarcoma‐associated herpesvirus lytic replication

Journal of Medical Virology(2021)10.1002/jmv.27228

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0DataRank · unranked

4 citations

Wen Meng, Shou‐Jiang Gao, Antonia Herrera‐Ortíz

Global profiling reveals common and distinct N6-methyladenosine (m6A) regulation of innate immune responses during bacterial and viral infections

Cell Death and Disease(2022)10.1038/s41419-022-04681-4

N/A

0DataRank · unranked

32 citations

Teng Zhang, Océane Sorel, Wen Meng, Xinquan Zhang, Zhao Lai +5 more

Development and characterization of a new monoclonal antibody against SARS‐CoV‐2 NSP12 (RdRp)

Journal of Medical Virology(2022)10.1002/jmv.28246

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0DataRank · unranked

9 citations

Siying Guo, Simon Cao, Masahiro Shuda, Lindsey R. Robinson‐McCarthy, Kevin R. McCarthy +14 more

N 6 -methyladenosine (m 6 A) and reader protein YTHDF2 enhance innate immune response by mediating DUSP1 mRNA degradation and activating mitogen-activated protein kinases during bacterial and viral infections

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.01.518805

N/A

0DataRank · unranked

0 citations

Wen Meng, Luping Chen, Xinquan Zhang, Ashley Markazi, Weiming Yuan +3 more