🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Shahira Abousamra

Stanford University

ORCID: 0000-0001-6214-1923
Computer ScienceBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 14 papers. Top paper: “Utilizing Automated Breast Cancer Detection to Identify Spatial Distributions of Tumor-Infiltrating Lymphocytes in Invasive Breast Cancer”.

Utilizing Automated Breast Cancer Detection to Identify Spatial Distributions of Tumor-Infiltrating Lymphocytes in Invasive Breast Cancer

American Journal Of Pathology(2020)10.1016/j.ajpath.2020.03.012
N/A
3.5DataRank · unranked
117 citations

Rajarsi Gupta, Le Hou, Shahira Abousamra, Danielle Fassler, Luke A. Torre-Healy +12 more

GaNDLF: the generally nuanced deep learning framework for scalable end-to-end clinical workflows

Communications Engineering(2023)10.1038/s44172-023-00066-3
N/A
1.0DataRank · unranked
36 citations

Siddhesh Thakur, İbrahim Ethem Hamamcı, Ujjwal Baid, Bhakti Baheti, Megh Bhalerao +37 more

Topology-Guided Multi-Class Cell Context Generation for Digital Pathology

PubMed(2023)10.1109/cvpr52729.2023.00324
N/A
0.416DataRank · unranked
15 citations

Rajarsi Gupta, Tahsin Kurç, Dimitris Samaras, Joel Saltz, Chao Chen +1 more

Hard Negative Sample Mining for Whole Slide Image Classification

Lecture notes in computer science(2024)10.1007/978-3-031-72083-3_14
N/A
0.312DataRank · unranked
7 citations

Xiaoling Hu, Shahira Abousamra, Prateek Prasanna, Chao Chen, Wentao Huang

Keratin 17 modulates the immune topography of pancreatic cancer

Journal of Translational Medicine(2024)10.1186/s12967-024-05252-1
N/A
0.241DataRank · unranked
4 citations

Michael Horowitz, Mariana Torrente-Goncalves, Lucia Roa‐Peña, Cindy V. Leiton, Mahmudul Hasan +20 more

New Spatial Phenotypes from Imaging Uncover Survival Differences for Breast Cancer Patients

PubMed(2024)10.1145/3698587.3701333
N/A
0.104DataRank · unranked
1 citations

Ariadna Kim Silva, Shahira Abousamra, Shao‐Jun Tang, Prateek Prasanna, Joel Saltz +4 more

Deep Learning-Based Mapping of Tumor Infiltrating Lymphocytes in Whole Slide Images of 23 Types of Cancer

Frontiers in Oncology(2022)10.3389/fonc.2021.806603
N/A
0DataRank · unranked
79 citations

Rajarsi Gupta, Le Hou, Rebecca Batiste, Tianhao Zhao, Anand Shankar +6 more

Uncertainty Estimation for Tumor Prediction with Unlabeled Data

PubMed(2024)10.1109/cvprw63382.2024.00688
N/A
0DataRank · unranked
2 citations

Shahira Abousamra, Li Chen, Rajarsi Gupta, Tahsin Kurç, Dimitris Samaras +4 more

Semi-supervised Contrastive VAE for Disentanglement of Digital Pathology Images

Lecture notes in computer science(2024)10.1007/978-3-031-72083-3_43
N/A
0DataRank · unranked
2 citations

Xiaoling Hu, Shahira Abousamra, Prateek Prasanna, Joel Saltz, Chao Chen +1 more

Pan-Cancer Tumor Infiltrating Lymphocyte Detection based on Federated Learning

(2024)10.1109/bigdata62323.2024.10825083
N/A
0DataRank · unranked
1 citations

Sarthak Pati, Tahsin Kurç, Rajarsi Gupta, Erich Bremer, Shahira Abousamra +4 more

Hard Negative Sample Mining for Whole Slide Image Classification

arXiv (Cornell University)(2024)10.48550/arxiv.2410.02212
N/A
0DataRank · unranked
0 citations

Hu, Xiaoling, Shahira Abousamra, Prateek Prasanna, Chao Chen, Wentao Huang

ChampKit: A framework for rapid evaluation of deep neural networks for patch-based histopathology classification

Computer Methods and Programs in Biomedicine(2023)10.1016/j.cmpb.2023.107631
N/A
0DataRank · unranked
16 citations

Rajarsi Gupta, Tahsin Kurç, Shahira Abousamra, Joel Saltz, Peter K. Koo +1 more

Label-Efficient Deep Color Deconvolution of Brightfield Multiplex IHC Images

IEEE Transactions on Medical Imaging(2025)10.1109/tmi.2025.3609245
N/A
0DataRank · unranked
0 citations

Danielle Fassler, Rajarsi Gupta, Tahsin Kurç, Luisa F. Escobar‐Hoyos, Dimitris Samaras +4 more

Topology-Guided Multi-Class Cell Context Generation for Digital Pathology

arXiv (Cornell University)(2023)10.48550/arxiv.2304.02255
N/A
0DataRank · unranked
0 citations

Rajarsi Gupta, Tahsin Kurç, Dimitris Samaras, Joel Saltz, Chao Chen +1 more