Shiqing Xu

Pharmaceutical Research and Manufacturers of America

Also affiliated with Institute of Rural Management Anand, China-Japan Friendship Hospital, Mitchell Institute, Drug Discovery Laboratory (Norway), Texas A&M University

MedicineComputer ScienceChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 28 papers. Top paper: “A Quick Route to Multiple Highly Potent SARS‐CoV‐2 Main Protease Inhibitors**”.

A Quick Route to Multiple Highly Potent SARS‐CoV‐2 Main Protease Inhibitors**

ChemMedChem(2020)10.1002/cmdc.202000924

N/A

0.736DataRank · unranked

134 citations

R. Xinyu, Yuying Ma, Yugendar R. Alugubelli, Danielle A. Scott, Erol C. Vatansever +17 more

Novel Regioselective Approach to Cyclize Phage-Displayed Peptides in Combination with Epitope-Directed Selection to Identify a Potent Neutralizing Macrocyclic Peptide for SARS-CoV-2

ACS Chemical Biology(2022)10.1021/acschembio.2c00565

N/A

0.477DataRank · unranked

23 citations

Tyler Lalonde, Jeffery M. Tharp, Yadagiri Kurra, Yugendar R. Alugubelli, Christopher M. Roundy +4 more

An amber obligate active site-directed ligand evolution technique for phage display

Nature Communications(2020)10.1038/s41467-020-15057-7

N/A

0DataRank · unranked

46 citations

J. Trae Hampton, Catrina A. Reed, Andreas Ehnbom, Peng‐Hsun Chase Chen, Jared S. Morse +5 more

Bepridil is potent against SARS-CoV-2 In Vitro

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.23.112235

N/A

0DataRank · unranked

30 citations

Kai S. Yang, Kaci C. Kratch, Aleksandra Drelich, Chia-Chuan Cho, Drake M. Mellott +4 more

A Speedy Route to Multiple Highly Potent SARS-CoV-2 Main Protease Inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.28.223784

N/A

0DataRank · unranked

10 citations

R. Xinyu, Yuying Ma, Yugendar R. Alugubelli, Danielle A. Scott, Erol C. Vatansever +17 more

The P3 O - Tert -Butyl-Threonine is Key to High Cellular and Antiviral Potency for Aldehyde-Based SARS-CoV-2 Main Protease Inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.18.473326

N/A

0DataRank · unranked

3 citations

Kai S. Yang, Zhi Geng, Yugendar R. Alugubelli, Namir Shaabani, Erol C. Vatansever +12 more

A systematic exploration of boceprevir-based main protease inhibitors as SARS-CoV-2 antivirals

European Journal of Medicinal Chemistry(2022)10.1016/j.ejmech.2022.114596

N/A

0DataRank · unranked

55 citations

Zhi Geng, Kai S. Yang, Namir Shaabani, Kaustav Khatua, R. Xinyu +13 more

A multi-pronged evaluation of aldehyde-based tripeptidyl main protease inhibitors as SARS-CoV-2 antivirals

European Journal of Medicinal Chemistry(2022)10.1016/j.ejmech.2022.114570

N/A

0DataRank · unranked

43 citations

Kai S. Yang, Zhi Geng, Yugendar R. Alugubelli, Namir Shaabani, Erol C. Vatansever +13 more

The Pyrrolysyl-tRNA Synthetase Activity can be Improved by a P188 Mutation that Stabilizes the Full-Length Enzyme

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167453

N/A

0DataRank · unranked

20 citations

Lauren R. Blankenship, Xinyu Ma, Shiqing Xu, Wenshe Ray Liu, Chia-Chuan Cho

Repurposing Halicin as a potent covalent inhibitor for the SARS-CoV-2 main protease

Current Research in Chemical Biology(2022)10.1016/j.crchbi.2022.100025

N/A

0DataRank · unranked

17 citations

Syuan‐Ting Kuo, Lauren R. Blankenship, Zhi Geng, Shuhua G. Li, David H. Russell +4 more

A Designed, Highly Efficient Pyrrolysyl-tRNA Synthetase Mutant Binds o-Chlorophenylalanine Using Two Halogen Bonds

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167534

N/A

0DataRank · unranked

15 citations

Kai S. Yang, Zhi Geng, Yuchen Qiao, Pingwei Li, Shiqing Xu +2 more

Phage‐assisted , active site‐directed ligand evolution of a potent and selective histone deacetylase 8 inhibitor

Protein Science(2022)10.1002/pro.4512

N/A

0DataRank · unranked

10 citations

Yan Sheng, J. Trae Hampton, Lauralee D. Sylvain, Sukant Kishore Das, Yugendar R. Alugubelli +6 more

A Novel Y-Shaped, S-O-N-O-S-Bridged Crosslink between Three Residues C22, C44, and K61 Is a Redox Switch of the SARS-CoV-2 Main Protease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.29.490044

N/A

0DataRank · unranked

3 citations

Syuan‐Ting Kuo, Lauren R. Blankenship, Yan Sheng, Banumathi Sankaran, Pingwei Li +6 more

The Prioritization of Eleven-Nineteen-Leukemia Inhibitors as Potential Drug Candidates to Treat Acute Myeloid Leukemia

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.07.519474

N/A

0DataRank · unranked

2 citations

Peng‐Hsun Chase Chen, Shiqing Xu, Wenshe Ray Liu, Xuejiao Shirley Guo

A Novel Regioselective Approach to Cyclize Phage-Displayed Peptides in Combination with Epitope-Directed Selection to Identify a Potent Neutralizing Macrocyclic Peptide for SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.06.498864

N/A

0DataRank · unranked

1 citations

Tyler Lalonde, Jeffery M. Tharp, Yadagiri Kurra, Yugendar R. Alugubelli, Christopher M. Roundy +4 more

Phage-Assisted, Active Site-Directed Ligand Evolution of a Potent and Selective Histone Deacetylase 8 Inhibitor

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.14.508049

N/A

0DataRank · unranked

1 citations

Yan Sheng, J. Trae Hampton, Lauralee D. Sylvain, Sukant Kishore Das, Yugendar R. Alugubelli +6 more

An Amber-Encoding Helper Phage for More Efficient Phage Display of Noncanonical Amino Acids

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.19.521047

N/A

0DataRank · unranked

0 citations

Chia-Chuan Dean Cho, Zhi Geng, Demonta D. Coleman, Peng‐Hsun Chase Chen, Gopal K. Dubey +4 more

A Systematic Survey of Reversibly Covalent Dipeptidyl Inhibitors of the SARS-CoV-2 Main Protease

Journal of Medicinal Chemistry(2023)10.1021/acs.jmedchem.3c00221

N/A

0DataRank · unranked

25 citations

Sandeep Atla, Namir Shaabani, Veerabhadra R. Vulupala, Kai S. Yang, Yugendar R. Alugubelli +13 more

An amber-encoding helper phage for more efficient phage display of noncanonical amino acids

Nucleic Acids Research(2023)10.1093/nar/gkad488

N/A

0DataRank · unranked

15 citations

Chia-Chuan Dean Cho, Demonta D. Coleman, Zhi Geng, Peng‐Hsun Chase Chen, G.K. Dubey +4 more

Discovery of First-in-Class PROTAC Degraders of SARS-CoV-2 Main Protease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.29.560163

N/A

0DataRank · unranked

9 citations

Jing Xiao, Kaustav Khatua, Sathish Kumar, Yuying Ma, R. Xinyu +8 more

A Systematic Survey of Reversibly Covalent Dipeptidyl Inhibitors of the SARS-CoV-2 Main Protease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.17.524469

N/A

0DataRank · unranked

4 citations

Sandeep Atla, Namir Shaabani, Veerabhadra R. Vulupala, Kai S. Yang, Yugendar R. Alugubelli +13 more

An Azapeptide Platform in Conjunction with Covalent Warheads to Uncover High-Potency Inhibitors for SARS-CoV-2 Main Protease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.11.536467

N/A

0DataRank · unranked

3 citations

Yugendar R. Alugubelli, Kai S. Yang, Veerabhadra R. Vulupala, Lauren R. Blankenship, Demonta Coleman +14 more

Discovery of First-in-Class PROTAC Degraders of SARS-CoV-2 Main Protease

Journal of Medicinal Chemistry(2024)10.1021/acs.jmedchem.3c02416

N/A

0DataRank · unranked

75 citations

Jing Xiao, Kaustav Khatua, Sathish Kumar, Long Sun, Yuying Ma +10 more

SARS-CoV-2 Main Protease Inhibitors That Leverage Unique Interactions with the Solvent Exposed S3 Site of the Enzyme

ACS Medicinal Chemistry Letters(2024)10.1021/acsmedchemlett.4c00146

N/A

0DataRank · unranked

12 citations

Kai S. Yang, Veerabhadra R. Vulupala, Yugendar R. Alugubelli, Kaustav Khatua, Demonta Coleman +8 more

Azapeptides with unique covalent warheads as SARS-CoV-2 main protease inhibitors

Antiviral Research(2024)10.1016/j.antiviral.2024.105874

N/A

0DataRank · unranked

11 citations

Yugendar R. Alugubelli, Kai S. Yang, Veerabhadra R. Vulupala, Lauren R. Blankenship, Demonta Coleman +15 more

BRD4354 Is a Potent Covalent Inhibitor against the SARS-CoV-2 Main Protease

Biochemistry(2024)10.1021/acs.biochem.3c00685

N/A

0DataRank · unranked

1 citations

Syuan‐Ting Kuo, Tingyuan Yang, Hanyuan Zhang, David H. Russell, Xin Yan +4 more

Facile One-Pot Synthesis of α-Boryl Ureas and Carbamates via in situ Generated α-Boryl Isocyanates to Uncover a Potent Main Protease Inhibitor

ChemRxiv(2025)10.26434/chemrxiv-2025-glhfk

N/A

0DataRank · unranked

0 citations

Satyanarayana Nyalata, Sophea Pa, Disni Gunasekera, Veerabhadra R. Vulupala, N. Arjunreddy Mallampudi +2 more

Expressed Protein Ligation without Intein

Journal of the American Chemical Society(2020)10.1021/jacs.0c00252

N/A

0DataRank · unranked

49 citations

Ge Yu, Kaci C. Kratch, Xiaoyan Aria Wang, Wesley W. Wang, Sunshine Z. Leeuwon +4 more