Andre Levchenko

Also affiliated with Systems Biology Institute

EngineeringBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 29 papers. Top paper: “Cas12a-knock-in mice for multiplexed genome editing, disease modelling and immune-cell engineering”.

Cas12a-knock-in mice for multiplexed genome editing, disease modelling and immune-cell engineering

Nature Biomedical Engineering(2025)10.1038/s41551-025-01371-2

N/A

0.651DataRank · unranked

23 citations

Liqun Zhou, Xiaolong Tian, Shao‐Yu Fang, Erica Vandenbulcke, Andrew Du +32 more

Multiparameter analysis of timelapse imaging reveals kinetics of megakaryocytic erythroid progenitor clonal expansion and differentiation

Scientific Reports(2022)10.1038/s41598-022-19013-x

N/A

0.546DataRank · unranked

10 citations

Evrett N. Thompson, Betty R. Lawton, Maria P. Kochugaeva, Kevinminh Ta, Madeline Y. Mayday +30 more

Connectome : computation and visualization of cell-cell signaling topologies in single-cell systems data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.21.427529

N/A

0.494DataRank · unranked

26 citations

Junchen Yang, James Garritano, Meng Wang, Dan Kushnir, Jonas C. Schupp +8 more

SARS-CoV-2 leverages airway epithelial protective mechanism for viral infection

iScience(2023)10.1016/j.isci.2023.106175

N/A

0.450DataRank · unranked

5 citations

Micha Sam Brickman Raredon, Maria P. Kochugaeva, Laura E. Niklason, Andre Levchenko, Allison M. Greaney

Solid tumor growth depends on an intricate equilibrium of malignant cell states

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.30.573100

N/A

0.208DataRank · unranked

3 citations

Olivera Grbovic-Huezo, Anupriya Singhal, Matilda Holm, Katherine Wu, Xuexiang Han +10 more

Spatial-temporal order-disorder transition in angiogenic NOTCH signaling controls cell fate specification

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.07.519534

N/A

0.165DataRank · unranked

2 citations

Federico Bocci, Qing Nie, José N. Onuchic, Andre Levchenko, Tae-Yun Kang

A molecular clock controls periodically driven cell migration in confined spaces

Cell Systems(2022)10.1016/j.cels.2022.05.005

N/A

0DataRank · unranked

24 citations

Jay Hou, Archer Hamidzadeh, Muhammad Sulaiman Yousafzai, Visar Ajeti, Hao Chang +4 more

Signal amplification in growth cone gradient sensing by a double negative feedback loop among PTEN, PI(3,4,5)P3 and actomyosin

Molecular and Cellular Neuroscience(2022)10.1016/j.mcn.2022.103772

N/A

0DataRank · unranked

4 citations

Sangwoo Shim, Katherine R. Hardin, Kiran Vanaja, Hongjun Song, Andre Levchenko +3 more

SARS-CoV-2 leverages airway epithelial protective mechanism for viral infection

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.29.478335

N/A

0DataRank · unranked

2 citations

Micha Sam Brickman Raredon, Maria P. Kochugaeva, Laura E. Niklason, Andre Levchenko, Allison M. Greaney

Time-lapse imaging reveals kinetics of megakaryocytic- erythroid progenitor self-renewal and differentiation

Research Square(2022)10.21203/rs.3.rs-1632074/v1

N/A

0DataRank · unranked

0 citations

Evrett Thompson, Betty R. Lawton, Maria P. Kochugaeva, Kevin Ta, Madeline Y. Mayday +30 more

Epigenetics as a mediator of plasticity in cancer

Science(2023)10.1126/science.aaw3835

N/A

0DataRank · unranked

241 citations

Andre Levchenko, Andrew P. Feinberg

CTLA-4 tail fusion enhances CAR-T antitumor immunity

Nature Immunology(2023)10.1038/s41590-023-01571-5

N/A

0DataRank · unranked

52 citations

Hanbing Cao, Shao‐Yu Fang, Ryan D. Chow, Kaiyuan Tang, Medha Majety +8 more

Genetic diseases: How the noise fits in

Current Biology(2023)10.1016/j.cub.2023.02.052

N/A

0DataRank · unranked

7 citations

Andre Levchenko

Spatial–temporal order–disorder transition in angiogenic NOTCH signaling controls cell fate specification

eLife(2023)10.7554/elife.89262

N/A

0DataRank · unranked

8 citations

Federico Bocci, Qing Nie, José N. Onuchic, Andre Levchenko, Tae-Yun Kang

Experimental and phylogenetic evidence for correlated gene expression evolution in endometrial and skin fibroblasts

iScience(2023)10.1016/j.isci.2023.108593

N/A

0DataRank · unranked

5 citations

Jamie Maziarz, Arig Ibrahim‐Hashim, Robert A. Gatenby, Kshitiz Gupta, Andre Levchenko +2 more

SPAK-dependent cotransporter activity mediates capillary adhesion and pressure during glioblastoma migration in confined spaces

Molecular Biology of the Cell(2023)10.1091/mbc.e23-03-0103

N/A

0DataRank · unranked

3 citations

Muhammad Sulaiman Yousafzai, Kyle Mohler, Vikrant Yadav, Sorosh Amiri, Joanna Szuszkiewicz +4 more

Spatial-temporal order-disorder transition in angiogenic NOTCH signaling controls cell fate specification

(2023)10.7554/elife.89262.1

N/A

0DataRank · unranked

2 citations

Federico Bocci, Qing Nie, José N. Onuchic, Andre Levchenko, Tae-Yun Kang

Dynamic decoding of VEGF signaling and coordinated control of multiple phenotypes by the Src-TEM4-YAP pathway

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.19.562360

N/A

0DataRank · unranked

0 citations

Tae-Yun Kang, Andre Levchenko, Sung Hoon Lee

TGF-β1 Drives Integrin-Dependent Pericyte Migration and Microvascular Destabilization in Fibrotic Disease

American Journal Of Pathology(2024)10.1016/j.ajpath.2024.02.021

N/A

0DataRank · unranked

10 citations

Michelle J. Wu, Tae-Yun Kang, Tracy D. Chung, Adrian Ledesma-Mendoza, Erica L. Herzog +5 more

Spatial-temporal order-disorder transition in angiogenic NOTCH signaling controls cell fate specification

eLife(2024)10.7554/elife.89262.2

N/A

0DataRank · unranked

0 citations

Federico Bocci, Qing Nie, José N. Onuchic, Andre Levchenko, Tae-Yun Kang

Specification of human brain regions with orthogonal gradients of WNT and SHH in organoids reveals patterning variations across cell lines

Cell stem cell(2025)10.1016/j.stem.2025.04.006

N/A

0DataRank · unranked

26 citations

Tae-Yun Kang, Alexandre Jourdon, Alex Nelson, Liang Yang, Feinan Wu +8 more

Oscillatory signal decoding within the ERK cascade

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.24.666680

N/A

0DataRank · unranked

0 citations

Ha Neul Lee, Brian Tenner, Sohum Mehta, Andre Levchenko, Jin Zhang +1 more

Modeling and measurement of signaling outcomes affecting decision making in noisy intracellular networks using machine learning methods

Integrative Biology(2020)10.1093/intbio/zyaa009

N/A

0DataRank · unranked

12 citations

Tomasz Lipniacki, Andre Levchenko, Effat S. Emamian, Ali Abdi, Mustafa Ozen

A Neyman-Pearson Framework for Modeling Cellular Decision Making Using Single-Cell TNF–NF-κB Signaling Data

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.30.696266

N/A

0DataRank · unranked

0 citations

Tomasz Lipniacki, Andre Levchenko, Ali Abdi, Ali Emadi

A molecular clock controls periodically driven cell migration in confined spaces

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.29.424673

N/A

0DataRank · unranked

2 citations

Archer Hamidzadeh, Muhammad Sulaiman Yousafzai, Visar Ajeti, Hao Chang, Michael P. Murrell +2 more

Translational control as a novel regulator of gradient sensing and chemotropism in yeast

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.13.422562

N/A

0DataRank · unranked

0 citations

Patrick Conlon, Raman Kumar Singh, Rohini R. Nair, Gal Haimovich, Camila Freze Baez +5 more

Regulation of PTEN translation by PI3K signaling maintains pathway homeostasis

Molecular Cell(2021)10.1016/j.molcel.2021.01.033

N/A

0DataRank · unranked

135 citations

Kiran Vanaja, Jacob A. Boyer, Sunyana Gadal, Hilla Solomon, Sarat Chandarlapaty +3 more

Phosphorylated WNK kinase networks in recoded bacteria recapitulate physiological function

Cell Reports(2021)10.1016/j.celrep.2021.109416

N/A

0DataRank · unranked

28 citations

Natasha L. Pirman, Kyle Mohler, Pierre A. Miranda-Herrera, Natanael Zarco, Onur Kilic +13 more

Computation and visualization of cell–cell signaling topologies in single-cell systems data using Connectome

Scientific Reports(2022)10.1038/s41598-022-07959-x

N/A

0DataRank · unranked

140 citations

Junchen Yang, James Garritano, Meng Wang, Dan Kushnir, Jonas C. Schupp +8 more