🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Karen M. Ottemann

University of California, Santa Cruz

ORCID: 0000-0001-6265-7401
MedicineImmunology and MicrobiologyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 11 papers. Top paper: “The flagellar motor protein FliL forms a scaffold of circumferentially positioned rings required for stator activation”.

The flagellar motor protein FliL forms a scaffold of circumferentially positioned rings required for stator activation

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2118401119
N/A
0.578DataRank · unranked
46 citations

Kar L. Chan, Xiaolin Liu, Skander Hathroubi, Wenwei Li, Briana Peterson +5 more

Helicobacter pylori Biofilm Confers Antibiotic Tolerance in Part via A Protein-Dependent Mechanism

Antibiotics(2020)10.3390/antibiotics9060355
N/A
0DataRank · unranked
42 citations

Julia Zerebinski, Aaron Clarke, Karen M. Ottemann, Skander Hathroubi

Gastric metabolomics analysis supports H. pylori ’s catabolism of organic and amino acids in both the corpus and antrum

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.01.183533
N/A
0DataRank · unranked
1 citations

Nina G. Steele, Sili Fan, Christina Yang, Yana Zavros, Karen M. Ottemann +1 more

Altering under-represented DNA sequences elevates bacterial transformation efficiency

mBio(2023)10.1128/mbio.02105-23
N/A
0DataRank · unranked
7 citations

Stefani Giacopazzi, Ryan Modlin, Kevin Karplus, David L. Bernick, Karen M. Ottemann +1 more

FliL Functions in Diverse Microbes to Negatively Modulate Motor Output via Its N-Terminal Region

mBio(2023)10.1128/mbio.00283-23
N/A
0DataRank · unranked
5 citations

Anna Roujeinikova, Karen M. Ottemann, Xiaolin Liu

Counterclockwise rotation of the flagellum promotes biofilm initiation in Helicobacter pylori

mBio(2024)10.1128/mbio.00440-24
N/A
0DataRank · unranked
18 citations

Paphavee Lertsethtakarn, Vanessa T. Mariscal, Fitnat H. Yildiz, Karen M. Ottemann, Xiaolin Liu

Determination of Protein–Ligand Binding Affinities by Thermal Shift Assay

ACS Pharmacology & Translational Science(2024)10.1021/acsptsci.4c00293
N/A
0DataRank · unranked
15 citations

Mohammad M. Rahman, Yue Xin, Abdur Mustafa, Brian J. Smith, Karen M. Ottemann +2 more

Helicobacter pylori luxS mutants cause hyperinflammatory responses during chronic infection

Microbiology Spectrum(2024)10.1128/spectrum.01073-24
N/A
0DataRank · unranked
4 citations

Alessandra Rodriguez y Baena, Bryce Manso, Shuai Hu, Raymondo Lopez-Magaña, Mané Ohanyan +2 more

Helicobacter pylori cheV1 mutants recover semisolid agar migration due to loss of a previously uncharacterized Type IV filament membrane alignment complex homolog

Journal of Bacteriology(2024)10.1128/jb.00406-23
N/A
0DataRank · unranked
4 citations

Samar Abedrabbo, Xiaolin Liu, Karen M. Ottemann, Jashwin Sagoo

Genetic requirements and transcriptomics of Helicobacter pylori biofilm formation on abiotic and biotic surfaces

npj Biofilms and Microbiomes(2020)10.1038/s41522-020-00167-3
N/A
0DataRank · unranked
58 citations

Shuai Hu, Karen M. Ottemann, Skander Hathroubi

Genetic Basis of Gap Formation Between Migrating Helicobacter pylori Colonies in Soft Agar Assays

Microorganisms(2025)10.3390/microorganisms13051087
N/A
0DataRank · unranked
3 citations

Skander Hathroubi, Hu Shuai, Xiaolin Liu, Karen M. Ottemann, Yasmine Elshenawi