Nomi L. Harris

Biochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

26.2Author DataRank

Indexed papers

17in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 17 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Human Phenotype Ontology in 2021

Nucleic Acids Research(2020)10.1093/nar/gkaa1043

Top 3%

7.0DataRank

Top 3%1255 citations

Michael Gargano, Nicolas Matentzoglu, Leigh C Carmody, David Lewis‐Smith, Nicole A. Vasilevsky +46 more

Papers

Driven by 52 papers — median percentile 70. Top paper: “The Gene Ontology resource: enriching a GOld mine”.

The Gene Ontology resource: enriching a GOld mine

Nucleic Acids Research(2020)10.1093/nar/gkaa1113

N/A

13.0DataRank · unranked

3876 citations

Eric Douglass, Benjamin M . Good, Deepak R Unni, Nomi L. Harris, Christopher J. Mungall +95 more

The Human Phenotype Ontology in 2021

Nucleic Acids Research(2020)10.1093/nar/gkaa1043

Top 3%

7.0DataRank

Top 3%1255 citations

Michael Gargano, Nicolas Matentzoglu, Leigh C Carmody, David Lewis‐Smith, Nicole A. Vasilevsky +46 more

The Gene Ontology knowledgebase in 2023

Genetics(2023)10.1093/genetics/iyad031

Top 4%

5.8DataRank

Top 4%2744 citations

James P. Balhoff, Seth Carbon, J. Michael Cherry, Harold Drabkin, Dustin Ebert +90 more

OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies

Database(2021)10.1093/database/baab069

N/A

5.0DataRank · unranked

210 citations

Nicolas A Matentzoglu, James A. Overton, Randi Vita, James P. Balhoff, Pier Luigi Buttigieg +20 more

KG-COVID-19: A Framework to Produce Customized Knowledge Graphs for COVID-19 Response

Patterns(2020)10.1016/j.patter.2020.100155

Top 7%

3.3DataRank

Top 7%95 citations

Deepak R Unni, Tiffany J. Callahan, Luca Cappelletti, Vida Ravanmehr, Seth Carbon +13 more

Mondo: Unifying diseases for the world, by the world

medRxiv(2022)10.1101/2022.04.13.22273750

Top 8%

2.7DataRank

Top 8%104 citations

Nicolas A Matentzoglu, Sabrina Toro, Joseph E Flack, Harshad Hegde, Deepak R Unni +83 more

The GA4GH Phenopacket schema defines a computable representation of clinical data

Nature Biotechnology(2022)10.1038/s41587-022-01357-4

N/A

2.4DataRank · unranked

111 citations

Michael Baudis, Gareth Baynam, J. Beckmann, Sergi Beltrán, Orion J. Buske +62 more

The case for open science: rare diseases

JAMIA Open(2020)10.1093/jamiaopen/ooaa030

N/A

2.2DataRank · unranked

63 citations

Peter N. Robinson, William A. Gahl, Paul Avillach, Gareth Baynam, Helene Cederroth +20 more

The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species

Nucleic Acids Research(2023)10.1093/nar/gkad1082

Top 14%

1.5DataRank

Top 14%106 citations

Kevin Schaper, Nicolas A Matentzoglu, Vincent Rubinetti, Faisal Alquaddoomi, Corey Cox +39 more

AI-readiness Criteria for Biomedical Data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.23.619844

N/A

1.2DataRank · unranked

24 citations

J. Harry Caufield, Jillian A. Parker, Mohammad Sadnan Al Manir, Edilberto Amorim, James A. Eddy +26 more

KG-Hub—building and exchanging biological knowledge graphs

Bioinformatics(2023)10.1093/bioinformatics/btad418

N/A

1.0DataRank · unranked

36 citations

Tim Putman, Kevin Schaper, Deepak R Unni, Harshad Hegde, Tiffany J. Callahan +21 more

NSAID use and clinical outcomes in COVID-19 patients: A 38-center retrospective cohort study

medRxiv(2021)10.1101/2021.04.13.21255438

N/A

1.0DataRank · unranked

18 citations

Ben D Coleman, Lauren E Chan, Hannah Blau, Tiffany J. Callahan, Luca Cappelletti +18 more

A compendium of human gene functions derived from evolutionary modelling

Nature(2025)10.1038/s41586-025-08592-0

Top 24%

0.848DataRank

Top 24%35 citations

Huaiyu Mi, Pascale Gaudet, Anushya Muruganujan, Suzanna Lewis, Dustin Ebert +95 more

A guide to the BRAIN Initiative Cell Census Network data ecosystem

PLoS Biology(2023)10.1371/journal.pbio.3002133

Top 24%

0.845DataRank

Top 24%56 citations

Maryann E. Martone, Giorgio A. Ascoli, Jan G. Bjaalie, Hong‐Wei Dong, Satrajit S. Ghosh +95 more

The Gene Ontology knowledgebase in 2026

Nucleic Acids Research(2025)10.1093/nar/gkaf1292

Top 27%

0.743DataRank

Top 27%95 citations

James P. Balhoff, Seth Carbon, J. Michael Cherry, Dustin Ebert, Marc Feuermann +95 more

Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning

Bioinformatics(2024)10.1093/bioinformatics/btae104

N/A

0.702DataRank · unranked

107 citations

Harshad Hegde, Vincent Emonet, Nomi L. Harris, Marcin P. Joachimiak, Nicolas A Matentzoglu +7 more

Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science

Clinical and Translational Science(2022)10.1111/cts.13302

N/A

0.694DataRank · unranked

101 citations

Sierra A. T. Moxon, Michael Bada, Matthew Brush, Richard Bruskiewich, J. Harry Caufield +19 more

Metformin is associated with reduced COVID-19 severity in patients with prediabetes

Diabetes Research and Clinical Practice(2022)10.1016/j.diabres.2022.110157

Top 30%

0.662DataRank

Top 30%21 citations

Elena Casiraghi, Bryan Laraway, Ben D Coleman, Hannah Blau, Adnin Zaman +11 more

Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies

Database(2022)10.1093/database/baac087

N/A

0.639DataRank · unranked

70 citations

Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P. Balhoff, Seth Carbon, Anita R. Caron +22 more

The GA4GH Phenopacket schema: A computable representation of clinical data for precision medicine

medRxiv(2021)10.1101/2021.11.27.21266944

N/A

0.631DataRank · unranked

14 citations

Michael Baudis, Gareth Baynam, J. Beckmann, Sergi Beltrán, Tiffany J. Callahan +42 more

The Ontology of Biological Attributes (OBA)—computational traits for the life sciences

Mammalian Genome(2023)10.1007/s00335-023-09992-1

Top 33%

0.596DataRank

Top 33%21 citations

James P. Balhoff, Meghan A. Balk, Robyn L. Ball, Susan M. Bello, Anita R. Caron +21 more

Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI)

Journal of Biomedical Semantics(2024)10.1186/s13326-024-00320-3

N/A

0.584DataRank · unranked

48 citations

Anna V. Anagnostopoulos, Susan M. Bello, Kai Blumberg, Rhiannon Cameron, Leigh C Carmody +25 more

Progress toward a universal biomedical data translator

Clinical and Translational Science(2022)10.1111/cts.13301

N/A

0.564DataRank · unranked

42 citations

Anne E. Thessen, Sergio E. Baranzini, Chris Bizon, Jennifer J. Hadlock, Sui Huang +22 more

Phenopacket-tools: Building and validating GA4GH Phenopackets

PLoS ONE(2023)10.1371/journal.pone.0285433

Top 36%

0.534DataRank

Top 36%12 citations

Julius O.B. Jacobsen, Alex H. Wagner, Tudor Groza, Martha A. Beckwith, Lauren Rekerle +13 more

NSAID use and clinical outcomes in COVID-19 patients: a 38-center retrospective cohort study

Virology Journal(2022)10.1186/s12985-022-01813-2

N/A

0.520DataRank · unranked

31 citations

Ben D Coleman, Lauren E Chan, Hannah Blau, Tiffany J. Callahan, Luca Cappelletti +18 more

BioPortal: an open community resource for sharing, searching, and utilizing biomedical ontologies

Nucleic Acids Research(2025)10.1093/nar/gkaf402

Top 40%

0.483DataRank

Top 40%14 citations

Nomi L. Harris, Michael V Dorf, Alex Skrenchuk, J. Harry Caufield, Rafael S. Gonçalves +6 more

Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science

Open MIND(2022)10.48550/arxiv.2203.13906

N/A

0.464DataRank · unranked

7 citations

Sierra A. T. Moxon, Michael Bada, Matthew Brush, Richard Bruskiewich, Paul A. Clemons +19 more

Efficient reinterpretation of rare disease cases using Exomiser

npj Genomic Medicine(2024)10.1038/s41525-024-00456-2

N/A

0.457DataRank · unranked

20 citations

Julius O.B. Jacobsen, Susan Walker, Valentina Cipriani, Nomi L. Harris, Melissa A Haendel +4 more

Brain Data Standards - A method for building data-driven cell-type ontologies

Scientific Data(2023)10.1038/s41597-022-01886-2

N/A

0.457DataRank · unranked

20 citations

Hüseyin Kır, Brian D. Aevermann, Tom Gillespie, Nomi L. Harris, Michael Hawrylycz +15 more

Mondo: integrating disease terminology across communities

Genetics(2025)10.1093/genetics/iyaf215

N/A

0.425DataRank · unranked

16 citations

Sabrina Toro, Nicolas A Matentzoglu, Joseph E Flack, Kathleen R. Mullen, Harshad Hegde +95 more

The Unified Phenotype Ontology : a framework for cross-species integrative phenomics

Genetics(2025)10.1093/genetics/iyaf027

Top 45%

0.406DataRank

Top 45%10 citations

Susan M. Bello, Ray Stefancsik, Sarah M. Alghamdi, Anna V. Anagnostopoulos, James P. Balhoff +41 more

OBO Foundry in 2021: Operationalizing Open Data Principles to Evaluate Ontologies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.01.446587

N/A

0.406DataRank · unranked

14 citations

Nicolas A Matentzoglu, James A. Overton, Randi Vita, James P. Balhoff, Pier Luigi Buttigieg +20 more

CurateGPT: A flexible language-model assisted biocuration tool

arXiv (Cornell University)(2024)10.48550/arxiv.2411.00046

N/A

0.330DataRank · unranked

8 citations

Carlo Kroll, Shawn T. O’Neil, Justin T Reese, Marcin P. Joachimiak, Harshad Hegde +8 more

A change language for ontologies and knowledge graphs

Database(2025)10.1093/database/baae133

N/A

0.330DataRank · unranked

8 citations

Jennifer Vendetti, Damien Goutte-Gattat, J. Harry Caufield, Graybeal, John, Nomi L. Harris +7 more

The BRAIN Initiative Cell Census Network Data Ecosystem: A User’s Guide

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.26.513573

Top 54%

0.312DataRank

Top 54%7 citations

Maryann E. Martone, Patrick R. Hof, Ed S. Lein, Aviv Regev, Giorgio A. Ascoli +94 more

Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI)

arXiv (Cornell University)(2023)10.48550/arxiv.2312.10904

N/A

0.312DataRank · unranked

7 citations

Anna V. Anagnostopoulos, S. Bello, Kai Blumberg, Rhiannon Cameron, Leigh C Carmody +25 more

Towards a standard benchmark for phenotype-driven variant and gene prioritisation algorithms: PhEval - Phenotypic inference Evaluation framework

BMC Bioinformatics(2025)10.1186/s12859-025-06105-4

N/A

0.269DataRank · unranked

5 citations

Vinícius de Souza, Katherina G Cortes, Melissa A Haendel, Nomi L. Harris, Daniel Korn +10 more

Association of post-COVID phenotypic manifestations with new-onset psychiatric disease

Translational Psychiatry(2024)10.1038/s41398-024-02967-z

N/A

0.269DataRank · unranked

5 citations

Elena Casiraghi, Tiffany J. Callahan, Hannah Blau, Lauren E Chan, Bryan Laraway +10 more

Towards a standard benchmark for phenotype-driven variant and gene prioritisation algorithms: PhEval - Phenotypic inference Evaluation framework

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.13.598672

N/A

0.269DataRank · unranked

5 citations

Vinícius de Souza, Katherina G Cortes, Melissa A Haendel, Nomi L. Harris, Daniel Korn +10 more

The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.26.525742

Top 59%

0.254DataRank

Top 59%3 citations

James P. Balhoff, Meghan A. Balk, Robyn L. Ball, Susan M. Bello, Anita R. Caron +21 more

A Change Language for Ontologies and Knowledge Graphs

arXiv (Cornell University)(2024)10.48550/arxiv.2409.13906

Top 71%

0.133DataRank

Top 71%1 citations

Vendetti, Jennifer, Goutte-Gattat, Damien, Caufield, J Harry, Graybeal, John B, Nomi L. Harris +7 more

A Simple Standard for Sharing Ontological Mappings (SSSOM)

Database(2022)10.1093/database/baac035

N/A

0.104DataRank · unranked

1 citations

James P. Balhoff, Susan M. Bello, Chris Bizon, Matthew Brush, Tiffany J. Callahan +39 more

Metformin is Associated with Reduced COVID-19 Severity in Patients with Prediabetes

medRxiv(2022)10.1101/2022.08.29.22279355

N/A

0.104DataRank · unranked

1 citations

Elena Casiraghi, Bryan Laraway, Ben D Coleman, Hannah Blau, Adnin Zaman +10 more

25 Years of BOSC, the Bioinformatics Open Source Conference

F1000Research(2024)10.12688/f1000research.156426.1

Top 78%

0.104DataRank

Top 78%1 citations

Karsten Hokamp, Jessica M. Maia, Hervé Ménager, Monica C. Munoz-Torres, Swapnil Sawant +3 more

KG-Hub -- Building and Exchanging Biological Knowledge Graphs

arXiv (Cornell University)(2023)10.48550/arxiv.2302.10800

N/A

0DataRank · unranked

0 citations

Tim Putman, Kevin Schaper, Deepak R Unni, Harshad Hegde, Tiffany J. Callahan +21 more

A Simple Standard for Ontological Mappings 2023: Updates on data model, collaborations and tooling

Zenodo (CERN European Organization for Nuclear Research)(2023)10.5281/zenodo.8202395

N/A

0DataRank · unranked

0 citations

Ian Braun, Anita R. Caron, Damien Goutte-Gattat, Benjamin M. Gyori, Nomi L. Harris +11 more

Gene Set Summarization using Large Language Models

arXiv (Cornell University)(2023)10.48550/arxiv.2305.13338

N/A

0DataRank · unranked

7 citations

J. Harry Caufield, Nomi L. Harris, Kim, Hyeongsik, Mungall, Christopher J., Marcin P. Joachimiak

BOSC 2022: the first hybrid and 23rd annual Bioinformatics Open Source Conference

F1000Research(2022)10.12688/f1000research.125043.1

N/A

0DataRank · unranked

0 citations

Karsten Hokamp, Hervé Ménager, Monica C Munoz-Torres, Deepak R Unni, Nicole A. Vasilevsky +2 more

BOSC 2023, the 24th annual Bioinformatics Open Source Conference

F1000Research(2023)10.12688/f1000research.143015.1

N/A

0DataRank · unranked

0 citations

Christopher J. Fields, Karsten Hokamp, Jérémy Just, Radhika S. Khetani, Jessica M. Maia +5 more

LinkML: an open data modeling framework

GigaScience(2025)10.1093/gigascience/giaf152

N/A

0DataRank · unranked

4 citations

Harold R. Solbrig, Nomi L. Harris, Patrick Kalita, Mark A. Miller, Sagar Patil +63 more

Author Correction: Brain Data Standards - A method for building data-driven cell-type ontologies

Scientific Data(2023)10.1038/s41597-023-02165-4

N/A

0DataRank · unranked

0 citations

Hüseyin Kır, Brian D. Aevermann, Tom Gillespie, Nomi L. Harris, Michael Hawrylycz +15 more

Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science

UNC Libraries(2025)10.17615/rc0v-1b82

N/A

0DataRank · unranked

0 citations

Sierra A. T. Moxon, Michael Bada, Matthew Brush, Richard Bruskiewich, J. Harry Caufield +20 more

Nomi L. Harris

Indexed papers

Top data-sharing exemplar

Papers