🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Andreas Prlić

Invitae (United States)

ORCID: 0000-0001-6346-6391
Biochemistry, Genetics and Molecular BiologyMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
21.8Author DataRank

Indexed papers

5in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The RCSB Protein Data Bank: new resources for research and education

Nucleic Acids Research(2012)10.1093/nar/gks1200
Top 1%
10.3DataRank
Top 1%537 citations

Chunxiao Bi, Wolfgang F. Bluhm, Cole H. Christie, Dimitris Dimitropoulos, Shuchismita Dutta +13 more

Papers

Driven by 16 papers — median percentile 84. Top paper: “BioJava: an open-source framework for bioinformatics in 2012”.

BioJava: an open-source framework for bioinformatics in 2012

Bioinformatics(2012)10.1093/bioinformatics/bts494
N/A
10.4DataRank · unranked
183 citations

Andrew Yates, Spencer E. Bliven, Peter W. Rose, Julius Jacobsen, Peter V. Troshin +14 more

The RCSB Protein Data Bank: new resources for research and education

Nucleic Acids Research(2012)10.1093/nar/gks1200
Top 1%
10.3DataRank
Top 1%537 citations

Chunxiao Bi, Wolfgang F. Bluhm, Cole H. Christie, Dimitris Dimitropoulos, Shuchismita Dutta +13 more

The RCSB Protein Data Bank: views of structural biology for basic and applied research and education

Nucleic Acids Research(2014)10.1093/nar/gku1214
Top 1%
10.2DataRank
Top 1%538 citations

Andreas Prlić, Chunxiao Bi, Wolfgang F. Bluhm, Cole H. Christie, Shuchismita Dutta +12 more

Systematic Detection of Internal Symmetry in Proteins Using CE-Symm

Journal of Molecular Biology(2014)10.1016/j.jmb.2014.03.010
N/A
1.7DataRank · unranked
49 citations

Spencer E. Bliven, Peter W. Rose, Zaid K. Aziz, Philippe Youkharibache, Philip E. Bourne +2 more

Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm

PLOS Computational Biology(2019)10.1371/journal.pcbi.1006842
N/A
1.4DataRank · unranked
36 citations

Aleixa Lafita, Peter W. Rose, Guido Capitani, Andreas Prlić, Philip E. Bourne +1 more

Detection of circular permutations within protein structures using CE-CP

Bioinformatics(2014)10.1093/bioinformatics/btu823
N/A
0.996DataRank · unranked
20 citations

Philip E. Bourne, Andreas Prlić, Spencer E. Bliven

The RCSB Protein Data Bank: redesigned web site and web services

Nucleic Acids Research(2010)10.1093/nar/gkq1021
N/A
0.976DataRank · unranked
670 citations

C. Bi, Benjamin Yukich, Peter W. Rose, Bojan Beran, Bi Chen +12 more

RCSB PDB Mobile : iOS and Android mobile apps to provide data access and visualization to the RCSB Protein Data Bank

Bioinformatics(2014)10.1093/bioinformatics/btu596
N/A
0.850DataRank · unranked
16 citations

Chunxiao Bi, Cole H. Christie, Kyle Pang, Andreas Prlić, Takanori Nakane +7 more

Pre-calculated protein structure alignments at the RCSB PDB website

Bioinformatics(2010)10.1093/bioinformatics/btq572
N/A
0.795DataRank · unranked
199 citations

Spencer E. Bliven, Peter W. Rose, Wolfgang F. Bluhm, Chris Bizon, Adam Godzik +2 more

BioJava-ModFinder: identification of protein modifications in 3D structures from the Protein Data Bank

Bioinformatics(2017)10.1093/bioinformatics/btx101
N/A
0.708DataRank · unranked
10 citations

Andreas Prlić, Chunxiao Bi, Wolfgang F. Bluhm, Dimitris Dimitropoulos, Dong Xu +3 more

Quality assurance for the query and distribution systems of the RCSB Protein Data Bank

Database(2011)10.1093/database/bar003
Top 31%
0.642DataRank
Top 31%8 citations

C. Bi, C. Shah, Benjamin Yukich, Wolfgang F. Bluhm, Bojan Beran +10 more

The evolution of the RCSB Protein Data Bank website

WIREs Computational Molecular Science(2011)10.1002/wcms.57
Top 32%
0.617DataRank
Top 32%11 citations

Bojan Beran, Chunxiao Bi, Wolfgang F. Bluhm, Dimitris Dimitropoulos, Zukang Feng +11 more

The RCSB Protein Data Bank: site functionality and bioinformatics use cases

NCI Nature Pathway Interaction Database(2011)10.1038/pid.2011.1
N/A
0.434DataRank · unranked
5 citations

Wolfgang F. Bluhm, Bojan Beran, Chunxiao Bi, Dimitris Dimitropoulos, David S. Goodsell +7 more

Investigation of protein quaternary structure via stoichiometry and symmetry ınformation

PLOS ONE(2018)10.1371/journal.pone.0197176
N/A
0.396DataRank · unranked
13 citations

Jose M. Duarte, Andreas Prlić, Dincer Goksuluk, Gokmen Zararsiz, Osman Saracbasi +3 more

Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm

bioRxiv (Cold Spring Harbor Laboratory)(2018)10.1101/297960
N/A
0.292DataRank · unranked
6 citations

Aleixa Lafita, Peter W. Rose, Guido Capitani, Andreas Prlić, Philip E. Bourne +1 more

Pre-calculated protein structure alignments at the RCSB PDB website: Fig. 1.

UNC Libraries(2020)10.17615/59hg-9047
N/A
0DataRank · unranked
0 citations

Spencer E. Bliven, Peter W. Rose, Wolfgang F. Bluhm, Chris Bizon, Adam Godzik +2 more