James E. Bruce

ChemistryBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 23 papers. Top paper: “Mitochondrial protein interaction landscape of SS-31”.

Mitochondrial protein interaction landscape of SS-31

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2002250117

N/A

0DataRank · unranked

173 citations

Xiaoting Tang, Matthew D. Campbell, Gustavo Reyes, Philip Kramer, Rudy Stuppard +6 more

Coordinate Regulation of Ribosome and tRNA Biogenesis Controls Hypoxic Injury and Translation

Current Biology(2020)10.1016/j.cub.2020.10.001

N/A

0DataRank · unranked

21 citations

Xuefei Zhong, Xiaoting Tang, Barbara A. Scott, Jun Yan, Stéphane Flibotte +6 more

Longitudinal Transcriptomic, Proteomic, and Metabolomic Analysis of Citrus limon Response to Graft Inoculation by Candidatus Liberibacter asiaticus

Journal of Proteome Research(2020)10.1021/acs.jproteome.9b00802

N/A

0DataRank · unranked

33 citations

Elizabeth L. Chin, Juan D. Chavez, Surya Saha, Darya Mischuk, Jaclyn Mahoney +15 more

Quantitative interactome analysis with chemical cross-linking and mass spectrometry

Current Opinion in Chemical Biology(2021)10.1016/j.cbpa.2021.06.011

N/A

0DataRank · unranked

45 citations

Juan D. Chavez, Xiaoting Tang, James E. Bruce, Helisa H. Wippel

Crosslinking mass spectrometry: A link between structural biology and systems biology

Protein Science(2021)10.1002/pro.4045

N/A

0DataRank · unranked

51 citations

Helisa H. Wippel, Juan D. Chavez, James E. Bruce, Xiaoting Tang

Acetylation of muscle creatine kinase negatively impacts high-energy phosphotransfer in heart failure

JCI Insight(2021)10.1172/jci.insight.144301

N/A

0DataRank · unranked

25 citations

Juan D. Chavez, Outi Villet, Xiaoting Tang, Andrew Keller, James E. Bruce +2 more

Deciphering the architecture and interactome of hnRNP proteins and enigmRBPs

Molecular Omics(2021)10.1039/d1mo00024a

N/A

0DataRank · unranked

8 citations

Mariana Fioramonte, Juan D. Chavez, James E. Bruce, Helisa H. Wippel

Application of frequency multiple FT-ICR MS signal acquisition for improved proteome research

International Journal of Mass Spectrometry(2021)10.1016/j.ijms.2021.116578

N/A

0DataRank · unranked

11 citations

Jared P. Mohr, Gordon Anderson, James E. Bruce, Sung‐Gun Park

Upregulation of mitochondrial ATPase inhibitory factor 1 (ATPIF1) mediates increased glycolysis in mouse hearts

Journal of Clinical Investigation(2022)10.1172/jci155333

N/A

0DataRank · unranked

53 citations

Arianne Caudal, Xiaoting Tang, Juan D. Chavez, Timothy S. McMillen, Andrew Keller +10 more

Mitochondrial interactome quantitation reveals structural changes in metabolic machinery in the failing murine heart

Nature Cardiovascular Research(2022)10.1038/s44161-022-00127-4

N/A

0DataRank · unranked

37 citations

Xiaoting Tang, Juan D. Chavez, Andrew Keller, Jared P. Mohr, Anna Bakhtina +7 more

Mitochondrial interactome remodeling in aging mouse skeletal muscle associated with functional decline

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.24.497539

N/A

0DataRank · unranked

0 citations

Gavin Pharaoh, Andrew Keller, Rudy Stuppard, David J. Marcinek, James E. Bruce +1 more

Skeletal muscle mitochondrial interactome remodeling is linked to functional decline in aged female mice

Nature Aging(2023)10.1038/s43587-023-00366-5

N/A

0DataRank · unranked

22 citations

Gavin Pharaoh, Matthew D. Campbell, Andrew Keller, Rudolph Stuppard, David J. Marcinek +2 more

Multidimensional Cross-Linking and Real-Time Informatics for Multiprotein Interaction Studies

Journal of Proteome Research(2023)10.1021/acs.jproteome.3c00455

N/A

0DataRank · unranked

10 citations

Arianne Caudal, Rong Tian, James E. Bruce, Jared P. Mohr

Studying Protein–Ligand Interactions by Protein Denaturation and Quantitative Cross-Linking Mass Spectrometry

Analytical Chemistry(2023)10.1021/acs.analchem.2c04501

N/A

0DataRank · unranked

9 citations

Andrew Keller, James E. Bruce, Martin Mathay

Integrated Analysis of Cross-Links and Dead-End Peptides for Enhanced Interpretation of Quantitative XL-MS

Journal of Proteome Research(2023)10.1021/acs.jproteome.3c00191

N/A

0DataRank · unranked

7 citations

Xiaoting Tang, James E. Bruce, Andrew Keller

A planar quadrupole device for transmitting and trapping ions in high vacuum

Rapid Communications in Mass Spectrometry(2023)10.1002/rcm.9610

N/A

0DataRank · unranked

1 citations

Jared P. Mohr, Gordon Anderson, James E. Bruce, Sung‐Gun Park

Integrated Analysis of Cross-Links and Dead-End Peptides for Enhanced Interpretation of Quantitative XL-MS

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.26.542474

N/A

0DataRank · unranked

0 citations

Xiaoting Tang, James E. Bruce, Andrew Keller

Chemical cross-linking and mass spectrometry enabled systems-level structural biology

Current Opinion in Structural Biology(2024)10.1016/j.sbi.2024.102872

N/A

0DataRank · unranked

21 citations

Anna Bakhtina, Nathan K. Kaiser, Andrew Keller, Seth McNutt, James E. Bruce +2 more

Combining Quantitative Proteomics and Interactomics for a Deeper Insight into Molecular Differences between Human Cell Lines

Journal of Proteome Research(2024)10.1021/acs.jproteome.4c00503

N/A

0DataRank · unranked

6 citations

Helisa H. Wippel, Juan D. Chavez, James E. Bruce, Anna Bakhtina

Combining quantitative proteomics and interactomics for a deeper insight into molecular differences between human cell lines

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.12.598691

N/A

0DataRank · unranked

3 citations

Helisa H. Wippel, Juan D. Chavez, James E. Bruce, Anna Bakhtina

Large-Scale Quantitative Cross-Linking and Mass Spectrometry Provide New Insight into Protein Conformational Plasticity within Organelles, Cells, and Tissues

Journal of Proteome Research(2025)10.1021/acs.jproteome.4c01030

N/A

0DataRank · unranked

7 citations

Anna Bakhtina, James E. Bruce, Andrew Keller

Assessment of Reported Error Rates in Crosslinking Mass Spectrometry

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.27.649519

N/A

0DataRank · unranked

2 citations

Lars Kolbowski, Swantje Lenz, James E. Bruce, Robert J. Chalkley, Michael R. Hoopmann +7 more

Interactome Quantitation Reveals Non-Energetic Mitochondrial Roles in Cell Type Specialization in Murine Kidney

Molecular & Cellular Proteomics(2025)10.1016/j.mcpro.2025.101441

N/A

0DataRank · unranked

0 citations

Matthew D. Campbell, BD Sibley, Monica Sanchez-Contreras, Andrew Keller, Mariya T. Sweetwyne +2 more