🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Daniel C. Zielinski

Novo Nordisk Foundation

ORCID: 0000-0001-6452-483X

Also affiliated with University of California San Diego, La Jolla Bioengineering Institute, Technical University of Denmark

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.1Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

iModulonDB 2.0: dynamic tools to facilitate knowledge-mining and user-enabled analyses of curated transcriptomic datasets

Nucleic Acids Research(2024)10.1093/nar/gkae1009
Top 31%
0.650DataRank
Top 31%30 citations

Jayanth Krishnan, Gaoyuan Li, Xuwen A Lou, Kevin Rychel, Yuan Yuan +9 more

Papers

Driven by 10 papers — median percentile 61. Top paper: “Empowering drug off-target discovery with metabolic and structural analysis”.

Empowering drug off-target discovery with metabolic and structural analysis

Nature Communications(2023)10.1038/s41467-023-38859-x
N/A
1.0DataRank · unranked
28 citations

Daniel C. Zielinski, Christopher Dalldorf, João V. Rodrigues, Bernhard Ø. Palsson, Eugene I. Shakhnovich +1 more

iModulonDB 2.0: dynamic tools to facilitate knowledge-mining and user-enabled analyses of curated transcriptomic datasets

Nucleic Acids Research(2024)10.1093/nar/gkae1009
Top 31%
0.650DataRank
Top 31%30 citations

Jayanth Krishnan, Gaoyuan Li, Xuwen A Lou, Kevin Rychel, Yuan Yuan +9 more

Escherichia coli Data-Driven Strain Design Using Aggregated Adaptive Laboratory Evolution Mutational Data

ACS Synthetic Biology(2021)10.1021/acssynbio.1c00337
Top 39%
0.489DataRank
Top 39%15 citations

Daniel C. Zielinski, James T. Yurkovich, Josefin Johnsen, Richard Szubin, Lei Yang +9 more

The hallmarks of a tradeoff in transcriptomes that balances stress and growth functions

mSystems(2024)10.1128/msystems.00305-24
N/A
0.484DataRank · unranked
20 citations

Kevin Rychel, Richard Szubin, Ying Hefner, Arjun Patel, Daniel C. Zielinski +2 more

The quantitative metabolome is shaped by abiotic constraints

Nature Communications(2021)10.1038/s41467-021-23214-9
N/A
0.470DataRank · unranked
22 citations

James T. Yurkovich, Daniel C. Zielinski, Bernhard Ø. Palsson, Amir Akbari

A genome-scale metabolic model of a globally disseminated hyperinvasive M1 strain of Streptococcus pyogenes

mSystems(2024)10.1128/msystems.00736-24
N/A
0.385DataRank · unranked
12 citations

Daniel C. Zielinski, Saugat Poudel, Kevin Rychel, Jonathon L. Baker, Yoshihiro Toya +7 more

Empowering systems-guided drug target discovery with metabolic and structural analysis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.17.444532
N/A
0.208DataRank · unranked
3 citations

Daniel C. Zielinski, Christopher Dalldorf, João V. Rodrigues, Bernhard Ø. Palsson, Eugene I. Shakhnovich +1 more

The quantitative metabolome is shaped by abiotic constraints

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.26.315135
N/A
0.104DataRank · unranked
1 citations

James T. Yurkovich, Daniel C. Zielinski, Bernhard Ø. Palsson, Amir Akbari

The hallmarks of a tradeoff in transcriptomes that balances stress and growth functions

Research Square(2023)10.21203/rs.3.rs-2729651/v1
N/A
0DataRank · unranked
9 citations

Kevin Rychel, Richard Szubin, Ying Hefner, Arjun Patel, Daniel C. Zielinski +2 more

Data-Driven Strain Design Using Aggregated Adaptive Laboratory Evolution Mutational Data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.19.452699
Top 100%
0DataRank
Top 100%0 citations

Daniel C. Zielinski, James T. Yurkovich, Josefin Johnsen, Richard Szubin, Lei Yang +8 more