Kirk Roberts

The University of Texas Health Science Center at Houston

Computer ScienceBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.670Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A health consumer ontology of fast food information

PubMed(2020)10.1109/bibm49941.2020.9313375

Top 47%

0.388DataRank

Top 47%5 citations

Jing Wang, Grace Xiong, Kirk Roberts, Cui Tao, Muhammad Amith

Papers

Driven by 28 papers — median percentile 48. Top paper: “Improving large language models for clinical named entity recognition via prompt engineering”.

Improving large language models for clinical named entity recognition via prompt engineering

Journal of the American Medical Informatics Association(2024)10.1093/jamia/ocad259

N/A

0.853DataRank · unranked

293 citations

Qingyu Chen, Jingcheng Du, Xueqing Peng, Vipina K. Keloth, Xu Zuo +7 more

quEHRy: a question answering system to query electronic health records

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad050

N/A

0.575DataRank · unranked

7 citations

Surabhi Datta, Kirk Roberts, Sarvesh Soni

Addressing ethical issues in healthcare artificial intelligence using a lifecycle-informed process

JAMIA Open(2024)10.1093/jamiaopen/ooae108

N/A

0.442DataRank · unranked

18 citations

Jean‐Christophe Bélisle‐Pipon, Barbara J. Evans, Kadija Ferryman, Xiaoqian Jiang, Camille Nebeker +12 more

A health consumer ontology of fast food information

PubMed(2020)10.1109/bibm49941.2020.9313375

Top 47%

0.388DataRank

Top 47%5 citations

Jing Wang, Grace Xiong, Kirk Roberts, Cui Tao, Muhammad Amith

A Multi-Modal Pelvic MRI Dataset for Deep Learning-Based Pelvic Organ Segmentation in Endometriosis

Scientific Data(2025)10.1038/s41597-025-05623-3

Top 57%

0.282DataRank

Top 57%5 citations

Linda Alpuing Radilla, Kamand Khalaj, Haaniya Dawoodally, Chinmay Mokashi, Xiaoming Guan +5 more

Self-Supervised Learning with Radiology Reports, A Comparative Analysis of Strategies for Large Vessel Occlusion and Brain CTA Images

PubMed(2023)10.1109/isbi53787.2023.10230623

N/A

0.269DataRank · unranked

5 citations

Surabhi Datta, Yi Dong, Sergio Salazar‐Marioni, Rania Abdelkhaleq, Arash Niktabe +4 more

Discerning conversational context in online health communities for personalized digital behavior change solutions using Pragmatics to Reveal Intent in Social Media (PRISM) framework

Journal of Biomedical Informatics(2023)10.1016/j.jbi.2023.104324

N/A

0.269DataRank · unranked

5 citations

Kirk Roberts, Trevor Cohen, Nathan Cobb, Amy Franklin, Sahiti Myneni +1 more

Generalizable self-supervised learning for brain CTA in acute stroke

Computers in Biology and Medicine(2024)10.1016/j.compbiomed.2024.109337

N/A

0.241DataRank · unranked

4 citations

Samiksha Pachade, Kirk Roberts, Xiaoqian Jiang, Sunil A. Sheth, Luca Giancardo +1 more

The IMPACT framework and implementation for accessible in silico clinical phenotyping in the digital era

npj Digital Medicine(2023)10.1038/s41746-023-00878-9

N/A

0.208DataRank · unranked

3 citations

Huan He, Sunyang Fu, Sijia Liu, Kurt Miller, Liwei Wang +5 more

Clinical Information Retrieval: A literature review

Research Square(2023)10.21203/rs.3.rs-2748158/v1

N/A

0.165DataRank · unranked

2 citations

Haneef Ahamed Mohammad, David Oniani, Kirk Roberts, William Hersh, Hongfang Liu +4 more

Leveraging Large Language Models for Knowledge-free Weak Supervision in Clinical Natural Language Processing

Research Square(2024)10.21203/rs.3.rs-4559971/v1

N/A

0DataRank · unranked

4 citations

Kirk Roberts, Enshuo Hsu

Leveraging Large Language Models for Knowledge-free Weak Supervision in Clinical Natural Language Processing

arXiv (Cornell University)(2024)10.48550/arxiv.2406.06723

N/A

0DataRank · unranked

1 citations

Kirk Roberts, Enshuo Hsu

Overview of TREC 2024 Biomedical Generative Retrieval (BioGen) Track

arXiv (Cornell University)(2024)10.48550/arxiv.2411.18069

N/A

0DataRank · unranked

0 citations

Dina Demner‐Fushman, William Hersh, Steven Bedrick, Kirk Roberts, Deepak Gupta

Evaluating large language model performance to support the diagnosis and management of patients with primary immune disorders

Journal of Allergy and Clinical Immunology(2025)10.1016/j.jaci.2025.02.004

N/A

0DataRank · unranked

18 citations

Yingya Li, Aaron Chin, Daniel DiGiacomo, Cullen M. Dutmer, Jocelyn R. Farmer +4 more

Proceedings of the second Artificial Intelligence in Primary Immunodeficiency (AIPI) meeting

Journal of Allergy and Clinical Immunology(2025)10.1016/j.jaci.2025.09.002

N/A

0DataRank · unranked

2 citations

Lisa Bastarache, Luiza C. Campos, Gerard Carot-Sans, Aaron Chin, Rumi Chunara +38 more

Toward Personalized Digital Experiences to Promote Diabetes Self-Management: Mixed Methods Social Computing Approach

JMIR Diabetes(2025)10.2196/60109

N/A

0DataRank · unranked

1 citations

Kirk Roberts, Kayo Fujimoto, Jing Wang, Constance Johnson, Sahiti Myneni +1 more

Gender-Neutral Large Language Models for Medical Applications: Reducing Bias in PubMed Abstracts

(2025)10.18653/v1/2025.bionlp-1.11

N/A

0DataRank · unranked

0 citations

Kirk Roberts, Elizabeth Schaefer

Deep representation learning of patient data from Electronic Health Records (EHR): A systematic review

Journal of Biomedical Informatics(2020)10.1016/j.jbi.2020.103671

N/A

0DataRank · unranked

241 citations

Jingcheng Du, Li Zhao, Xiaoqian Jiang, Timothy A. Miller, Fei Wang +3 more

Context Matching is not Reasoning: Assessing Generalized Evaluation of Generative Language Models in Clinical Settings

Research Square(2025)10.21203/rs.3.rs-7325383/v1

N/A

0DataRank · unranked

0 citations

Qiuhao Lu, Yu-Neng Chuang, Guanchu Wang, Jiayi Yuan, Jiamu Zhang +10 more

A content-based dataset recommendation system for researchers—a case study on Gene Expression Omnibus (GEO) repository

Database(2020)10.1093/database/baaa064

N/A

0DataRank · unranked

51 citations

Kirk Roberts, Hulin Wu, Braja Gopal Patra

Toward a standard formal semantic representation of the model card report

BMC Bioinformatics(2022)10.1186/s12859-022-04797-6

N/A

0DataRank · unranked

18 citations

Licong Cui, Degui Zhi, Kirk Roberts, Xiaoqian Jiang, Fang Li +3 more

Logical definition-based identification of potential missing concepts in SNOMED CT

BMC Medical Informatics and Decision Making(2023)10.1186/s12911-023-02183-7

N/A

0DataRank · unranked

3 citations

Rashmie Abeysinghe, Kirk Roberts, Licong Cui, Xubing Hao

Text Classification of Cancer Clinical Trial Eligibility Criteria

PubMed(2023)10.48550/arxiv.2309.07812

N/A

0DataRank · unranked

7 citations

Soumya Jayaraj, Ethan B. Ludmir, Kirk Roberts, Yumeng Yang

Application of an ontology for model cards to generate computable artifacts for linking machine learning information from biomedical research

PubMed(2023)10.1145/3543873.3587601

N/A

0DataRank · unranked

3 citations

Licong Cui, Kirk Roberts, Cui Tao, Muhammad Amith

Clinical Information Retrieval: A Literature Review

Journal of Healthcare Informatics Research(2024)10.1007/s41666-024-00159-4

N/A

0DataRank · unranked

30 citations

Haneef Ahamed Mohammad, David Oniani, Kirk Roberts, William Hersh, Hongfang Liu +4 more

Ensemble pretrained language models to extract biomedical knowledge from literature

Journal of the American Medical Informatics Association(2024)10.1093/jamia/ocae061

N/A

0DataRank · unranked

19 citations

Qiang Wei, Liang‐Chin Huang, Jianfu Li, Yan Hu, Yao-Shun Chuang +11 more

PheNormGPT: a framework for extraction and normalization of key medical findings

Database(2024)10.1093/database/baae103

N/A

0DataRank · unranked

2 citations

Kirk Roberts, Ekin Soysal

Quantitatively assessing the impact of the quality of SNOMED CT subtype hierarchy on cohort queries

Journal of the American Medical Informatics Association(2024)10.1093/jamia/ocae272

N/A

0DataRank · unranked

3 citations

Xiaojin Li, Yan Huang, Jay Shi, Rashmie Abeysinghe, Cui Tao +4 more

Kirk Roberts

Indexed papers

Top data-sharing exemplar

Papers