Amanda G. Paulovich

ChemistryBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

3.7Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Proteogenomic data and resources for pan-cancer analysis

Cancer Cell(2023)10.1016/j.ccell.2023.06.009

Top 6%

3.4DataRank

Top 6%241 citations

Yongchao Dou, Felipe da Veiga Leprevost, Yifat Geffen, Anna Calinawan, François Aguet +93 more

Papers

Driven by 35 papers — median percentile 66. Top paper: “Proteogenomics connects somatic mutations to signalling in breast cancer”.

Proteogenomics connects somatic mutations to signalling in breast cancer

Nature(2016)10.1038/nature18003

N/A

12.7DataRank · unranked

1777 citations

Philipp Mertins, D. R. Mani, Kelly V. Ruggles, Michael A. Gillette, Karl R. Clauser +31 more

Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma

Cell(2020)10.1016/j.cell.2020.06.013

N/A

9.1DataRank · unranked

837 citations

Shankha Satpathy, Song Cao, Saravana M. Dhanasekaran, Suhas Vasaikar, Karsten Krug +95 more

Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy

Cell(2020)10.1016/j.cell.2020.10.036

N/A

8.1DataRank · unranked

565 citations

Eric J. Jaehnig, Shankha Satpathy, Lili M. Blumenberg, Alla Y. Karpova, Meenakshi Anurag +85 more

A proteogenomic portrait of lung squamous cell carcinoma

Cell(2021)10.1016/j.cell.2021.07.016

N/A

7.2DataRank · unranked

392 citations

Karsten Krug, Pierre M. Jean Beltran, Sara R. Savage, Francesca Petralia, Chandan Kumar‐Sinha +95 more

Histopathologic and proteogenomic heterogeneity reveals features of clear cell renal cell carcinoma aggressiveness

Cancer Cell(2022)10.1016/j.ccell.2022.12.001

N/A

3.6DataRank · unranked

216 citations

T. Mamie Lih, Saravana M. Dhanasekaran, Rahul Mannan, Lijun Chen, Marcin Cieślik +95 more

Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation

Cell(2023)10.1016/j.cell.2023.07.013

N/A

3.5DataRank · unranked

197 citations

Shankara Anand, Yo Akiyama, Tomer M. Yaron, Yizhe Song, Jared L. Johnson +90 more

Proteogenomic data and resources for pan-cancer analysis

Cancer Cell(2023)10.1016/j.ccell.2023.06.009

Top 6%

3.4DataRank

Top 6%241 citations

Yongchao Dou, Felipe da Veiga Leprevost, Yifat Geffen, Anna Calinawan, François Aguet +93 more

Quantification of Human Epidermal Growth Factor Receptor 2 by Immunopeptide Enrichment and Targeted Mass Spectrometry in Formalin-Fixed Paraffin-Embedded and Frozen Breast Cancer Tissues

Clinical Chemistry(2021)10.1093/clinchem/hvab047

N/A

1.8DataRank · unranked

48 citations

Jeffrey R. Whiteaker, Laura C. Kennedy, Dustin E. Bosch, Melissa Lerch, Regine M. Schoenherr +10 more

Integrative multi-omic cancer profiling reveals DNA methylation patterns associated with therapeutic vulnerability and cell-of-origin

Cancer Cell(2023)10.1016/j.ccell.2023.07.013

N/A

1.8DataRank · unranked

107 citations

Rita Jui-Hsien Lu, Reyka G. Jayasinghe, Steven M. Foltz, Eduard Porta‐Pardo, Yifat Geffen +95 more

Pan-cancer proteogenomics characterization of tumor immunity

Cell(2024)10.1016/j.cell.2024.01.027

N/A

1.7DataRank · unranked

91 citations

Weiping Ma, Tomer M. Yaron, Francesca Pia Caruso, Nicole Tignor, Joshua M. Wang +95 more

Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

Proceedings of the National Academy of Sciences(2005)10.1073/pnas.0506580102

N/A

1.6DataRank · unranked

55906 citations

Pablo Tamayo, Vamsi K. Mootha, Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette +6 more

Neoadjuvant vidutolimod and nivolumab in high-risk resectable melanoma: A prospective phase II trial

Cancer Cell(2024)10.1016/j.ccell.2024.10.007

N/A

1.3DataRank · unranked

59 citations

Robert M. Morrison, Amiran Dzutsev, Arivarasan Karunamurthy, Joë-Marc Chauvin, F. Amatore +48 more

Comprehensive proteogenomic characterization of rare kidney tumors

Cell Reports Medicine(2024)10.1016/j.xcrm.2024.101547

N/A

0.920DataRank · unranked

46 citations

Lijun Chen, Yi Hsiao, Rahul Mannan, Yuping Zhang, Jie Luo +95 more

Integrated Proteogenomic Characterization across Major Histological Types of Pediatric Brain Cancer

Cell(2020)10.1016/j.cell.2020.10.044

N/A

0.878DataRank · unranked

347 citations

Nicole Tignor, Boris Reva, Mateusz P. Koptyra, Shrabanti Chowdhury, Dmitry Rykunov +94 more

Targeted mass-spectrometry-based assays enable multiplex quantification of receptor tyrosine kinase, MAP kinase, and AKT signaling

Cell Reports Methods(2021)10.1016/j.crmeth.2021.100015

N/A

0.868DataRank · unranked

22 citations

Kanika Sharma, Melissa Hoffman, Eric Kuhn, Lei Zhao, Alexandra R. Cocco +19 more

Deep learning integrates histopathology and proteogenomics at a pan-cancer level

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.101173

N/A

0.843DataRank · unranked

33 citations

Runyu Hong, Elizabeth G. Demicco, Jimin Tan, Rossana Lazcano, André L. Moreira +95 more

A highly annotated database of genes associated with platinum resistance in cancer

Oncogene(2021)10.1038/s41388-021-02055-2

N/A

0.751DataRank · unranked

148 citations

Sara R. Savage, Anna Calinawan, Chenwei Lin, Bing Zhang, Pei Wang +4 more

Proteogenomic analysis of chemo-refractory high-grade serous ovarian cancer

Cell(2023)10.1016/j.cell.2023.07.004

N/A

0.680DataRank · unranked

92 citations

Jacob J. Kennedy, Richard G. Ivey, Oscar Murillo, Noshad Hosseini, Xiaoyu Song +42 more

Proteogenomic analysis of chemo-refractory high-grade serous ovarian cancer

Cell(2024)10.1016/j.cell.2024.01.016

N/A

0.373DataRank · unranked

11 citations

Jacob J. Kennedy, Richard G. Ivey, Oscar Murillo, Noshad Hosseini, Xiaoyu Song +42 more

Precision proteogenomics reveals pan-cancer impact of germline variants

Cell(2025)10.1016/j.cell.2025.03.026

N/A

0.341DataRank · unranked

8 citations

Nadezhda V. Terekhanova, Kathleen J. Imbach, Karl R. Clauser, Myvizhi Esai Selvan, Isabel Mendizabal +132 more

Proteogenomics connects somatic mutations to signalling in breast cancer

UNC Libraries(2020)10.17615/mepw-5x28

N/A

0.269DataRank · unranked

5 citations

Mani, Kelly V. Ruggles, Michael A. Gillette, Karl R. Clauser, Pei Wang +31 more

Proteomic-based stemness score measures oncogenic dedifferentiation and enables the identification of druggable targets

Cell Genomics(2025)10.1016/j.xgen.2025.100851

N/A

0.254DataRank · unranked

4 citations

Renan Simões, Emerson de Souza Santos, Elizabeth G. Demicco, Rossana N. Lazcano Segura, Ma Weiping +95 more

RNA and phosphoprotein profiles of TP53- and PTEN-knockouts in MCF10A at baseline and responding to DNA damage

Scientific Data(2024)10.1038/s41597-023-02829-1

Top 61%

0.236DataRank

Top 61%3 citations

Regine M. Schoenherr, Uliana J. Voytovich, Richard G. Ivey, Jacob J. Kennedy, Jeffrey R. Whiteaker +3 more

Proteome Profiling Outperforms Transcriptome Profiling for Coexpression Based Gene Function Prediction

Digital Commons@Becker (Washington University School of Medicine)(2020)10.17615/b898-yw29

N/A

0.104DataRank · unranked

1 citations

Amanda G. Paulovich, R. Reid Townsend, Matthew J. Ellis, Zihao Ma, Christopher R. Kinsinger +15 more

Monitoring Both Extended and Tryptic Forms of Stable Isotope-Labeled Standard Peptides Provides an Internal Quality Control of Proteolytic Digestion in Targeted Mass Spectrometry-Based Assays

Molecular & Cellular Proteomics(2023)10.1016/j.mcpro.2023.100621

N/A

0DataRank · unranked

2 citations

Jacob J. Kennedy, Oscar Murillo, Richard G. Ivey, Lei Zhao, Regine M. Schoenherr +5 more

Hormone Receptor–Positive Breast Cancer Sensitive to Pembrolizumab: Evidence of the Pathogenicity of the MLH1 Variant 1835del3

Journal of the National Comprehensive Cancer Network(2023)10.6004/jnccn.2023.7035

N/A

0DataRank · unranked

2 citations

Jeffrey R. Whiteaker, Brianna Nelson, Richard G. Ivey, Travis D. Lorentzen, Uliana J. Voytovich +5 more

Multiomic analysis identifies CPT1A as a potential therapeutic target in platinum-refractory, high-grade serous ovarian cancer

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100471

N/A

0DataRank · unranked

75 citations

Shrabanti Chowdhury, Hong Wang, Sara R. Savage, Richard G. Ivey, Jacob J. Kennedy +25 more

Internal Standard Triggered-Parallel Reaction Monitoring Mass Spectrometry Enables Multiplexed Quantification of Candidate Biomarkers in Plasma

Analytical Chemistry(2022)10.1021/acs.analchem.1c04382

N/A

0DataRank · unranked

33 citations

Jeffrey R. Whiteaker, Richard G. Ivey, Aura Burian, Shrabanti Chowdhury, Chia‐Feng Tsai +14 more

CDK5–cyclin B1 regulates mitotic fidelity

Nature(2024)10.1038/s41586-024-07888-x

N/A

0DataRank · unranked

21 citations

Aniruddha Sarkar, Humphrey Lotana, Aleem Syed, Huy Nguyen, Richard G. Ivey +11 more

Characterization of an expanded set of assays for immunomodulatory proteins using targeted mass spectrometry

Scientific Data(2024)10.1038/s41597-024-03467-x

N/A

0DataRank · unranked

0 citations

Lei Zhao, Regine M. Schoenherr, Dongqing Huang, Jacob J. Kennedy, Richard G. Ivey +13 more

Proteogenomic characterization of highly enriched viable leukemic blasts in acute myeloid leukemia: A SWOG report

eJHaem(2024)10.1002/jha2.1041

N/A

0DataRank · unranked

0 citations

Megan Othus, Chenwei Lin, Melinda A. Biernacki, Marie Bleakley, Thomas R. Chauncey +20 more

Comparative analysis of TCR and CAR signaling informs CAR designs with superior antigen sensitivity and in vivo function

Science Signaling(2021)10.1126/scisignal.abe2606

N/A

0DataRank · unranked

164 citations

Anusha Rajan, Jacob J. Kennedy, Richard G. Ivey, Sarah A. Shelby, Isabel Leung +10 more

Targeted Mass Spectrometry Enables Multiplexed Quantification of Immunomodulatory Proteins in Clinical Biospecimens

Frontiers in Immunology(2021)10.3389/fimmu.2021.765898

N/A

0DataRank · unranked

25 citations

Rachel A. Lundeen, Lei Zhao, Regine M. Schoenherr, Aura Burian, Dongqing Huang +29 more

Clinical Proteomics for Solid Organ Tissues

Molecular & Cellular Proteomics(2023)10.1016/j.mcpro.2023.100648

N/A

0DataRank · unranked

14 citations

Mark Kilgore, Jacob J. Kennedy, Jeffrey R. Whiteaker, Andrew N. Hoofnagle, Amanda G. Paulovich +1 more

A multiplexed assay for quantifying immunomodulatory proteins supports correlative studies in immunotherapy clinical trials

Frontiers in Oncology(2023)10.3389/fonc.2023.1168710

N/A

0DataRank · unranked

5 citations

Lei Zhao, Regine M. Schoenherr, Dongqing Huang, Rachel A. Lundeen, Ulianna Voytovich +24 more

Amanda G. Paulovich

Indexed papers

Top data-sharing exemplar

Papers