🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Jonathan Livny

Broad Institute

ORCID: 0000-0001-6589-3020

Also affiliated with Vanderbilt University Medical Center

Biochemistry, Genetics and Molecular BiologyEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

At-home Testing and Risk Factors for Acquisition of SARS-CoV-2 Infection in a Major US Metropolitan Area

medRxiv(2022)10.1101/2022.02.02.22269258
Top 100%
0DataRank
Top 100%0 citations

Scott Dryden‐Peterson, Andy Kim, Sarah Naz‐McLean, Christina Kelly, Hannah H. Laibinis +9 more

Papers

Driven by 17 papers — median percentile 0. Top paper: “Nucleic acid detection with CRISPR-Cas13a/C2c2”.

Nucleic acid detection with CRISPR-Cas13a/C2c2

Science(2017)10.1126/science.aam9321
N/A
1.2DataRank · unranked
3722 citations

Omar O. Abudayyeh, Jeong Wook Lee, Patrick Essletzbichler, Aaron J. Dy, Julia Joung +15 more

Persistent Salmonella infections in humans are associated with mutations in the BarA/SirA regulatory pathway

Cell Host & Microbe(2024)10.1016/j.chom.2023.12.001
N/A
0.696DataRank · unranked
21 citations

Bar Piscon, Abigail L. Manson, Boaz Adani, Helit Cohen, Jonathan Livny +3 more

Persistent Salmonella infections in humans are associated with mutations in the BarA/SirA regulatory pathway

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.21.496976
N/A
0.104DataRank · unranked
1 citations

Bar Piscon, Abigail L. Manson, Jonathan Livny, Ashlee M. Earl, Ohad Gal‐Mor +1 more

Functional analyses and single cell immunoprofiling uncover sex-specific differences in SARS-CoV2 immune memory development

Research Square(2022)10.21203/rs.3.rs-1416969/v1
N/A
0.104DataRank · unranked
1 citations

Eric M. Brown, Maura Benson, Liat Amir-Zilberstein, Sung‐Moo Park, Vladislav Pokatayev +23 more

Genetic determinants facilitating the evolution of resistance to carbapenem antibiotics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.11.430761
N/A
0.104DataRank · unranked
1 citations

Lorrie L. He, Alejandro Pironti, Hannah H. Laibinis, Christoph M. Ernst, Abigail L. Manson +5 more

At-home Testing and Risk Factors for Acquisition of SARS-CoV-2 Infection in a Major US Metropolitan Area

Open Forum Infectious Diseases(2022)10.1093/ofid/ofac505
N/A
0DataRank · unranked
5 citations

Scott Dryden‐Peterson, Andy Kim, Sarah Naz‐McLean, Christina Kelly, Hannah H. Laibinis +10 more

At-home Testing and Risk Factors for Acquisition of SARS-CoV-2 Infection in a Major US Metropolitan Area

medRxiv(2022)10.1101/2022.02.02.22269258
Top 100%
0DataRank
Top 100%0 citations

Scott Dryden‐Peterson, Andy Kim, Sarah Naz‐McLean, Christina Kelly, Hannah H. Laibinis +9 more

Uropathogenic Escherichia coli infection-induced epithelial trained immunity impacts urinary tract disease outcome

Nature Microbiology(2023)10.1038/s41564-023-01346-6
N/A
0DataRank · unranked
64 citations

Jessica K. Harrison, Benjamin Olson, Hyung Joo Lee, Valerie P. O’Brien, Xiaoyun Xing +14 more

Genome Sequence of Lichtheimia ornata, an Emerging Opportunistic Mucorales Pathogen

Microbiology Resource Announcements(2023)10.1128/mra.00338-23
Top 100%
0DataRank
Top 100%0 citations

Jason T. Mohabir, Tania Kurbessoian, Brittany Berdy, J Fontaine, Andreas Gnirke +4 more

Perturbation-specific transcriptional mapping for unbiased target elucidation of antibiotics

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2409747121
N/A
0DataRank · unranked
7 citations

Josephine Bagnall, Thulasi Warrier, Jaryd Sullivan, Kristina Ferrara, Marek Orzechowski +6 more

Perturbation-Specific Transcriptional Mapping for unbiased target elucidation of antibiotics

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.25.590978
N/A
0DataRank · unranked
0 citations

Josephine Bagnall, Thulasi Warrier, Jaryd Sullivan, Kristina Ferrara, Marek Orzechowski +6 more

Multi-omic analysis reveals transkingdom gut dysbiosis in metabolic dysfunction-associated steatotic liver disease

Nature Metabolism(2025)10.1038/s42255-025-01318-6
N/A
0DataRank · unranked
21 citations

Paul V. Nelson, Étienne Nzabarushimana, Jiaxian Shen, Jordan Jensen, Amrisha Bhosle +16 more

Genetic diversity of Salmonella enterica during acute human infections

Gut Microbes(2025)10.1080/19490976.2025.2491666
N/A
0DataRank · unranked
2 citations

Natav Hendin, Sharon Amit, Boaz Adani, Galia Rahav, Amos Adler +4 more

Analysis of a phase-variable restriction modification system of the human gut symbiont Bacteroides fragilis

Nucleic Acids Research(2020)10.1093/nar/gkaa824
N/A
0DataRank · unranked
29 citations

Michael J. Coyne, Alexey Fomenkov, Jonathan Livny, William P. Robins, Maite Muniesa +8 more

The cvn8 Conservon System Is a Global Regulator of Specialized Metabolism in Streptomyces coelicolor during Interspecies Interactions

mSystems(2021)10.1128/msystems.00281-21
N/A
0DataRank · unranked
10 citations

Yein Ra, Luis M. Cantu Morin, Javier Soto Bustos, Jonathan Livny, Matthew F. Traxler +1 more

Bacterial infection drives trained immunity through epigenetic remodeling of epithelial stem cells

Research Square(2021)10.21203/rs.3.rs-842556/v1
N/A
0DataRank · unranked
0 citations

Seongmi K. Russell, Hyung Joo Lee, Benjamin Olson, Jonathan Livny, Valerie P. O’Brien +9 more

Multiplexed detection of bacterial nucleic acids using Cas13 in droplet microarrays

PNAS Nexus(2022)10.1093/pnasnexus/pgac021
N/A
0DataRank · unranked
33 citations

Cheri M. Ackerman, Cameron Myhrvold, Roby P. Bhattacharyya, Jonathan Livny, Peijun Ma +5 more