🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Jonathan M. Carlson

Microsoft (United States)

ORCID: 0000-0001-6618-3653
Immunology and MicrobiologyBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
5.7Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A large-scale database of T-cell receptor beta (TCRβ) sequences and binding associations from natural and synthetic exposure to SARS-CoV-2.

Research Square(2020)10.21203/rs.3.rs-51964/v1
Top 5%
4.7DataRank
Top 5%166 citations

Marissa Vignali, Mark Klinger, Jennifer N. Dines, Ian M. Kaplan, Emily Svejnoha +22 more

Papers

Driven by 11 papers — median percentile 88. Top paper: “A large-scale database of T-cell receptor beta (TCRβ) sequences and binding associations from natural and synthetic exposure to SARS-CoV-2.”.

A large-scale database of T-cell receptor beta (TCRβ) sequences and binding associations from natural and synthetic exposure to SARS-CoV-2.

Research Square(2020)10.21203/rs.3.rs-51964/v1
Top 5%
4.7DataRank
Top 5%166 citations

Marissa Vignali, Mark Klinger, Jennifer N. Dines, Ian M. Kaplan, Emily Svejnoha +22 more

A large-scale database of T-cell receptor beta sequences and binding associations from natural and synthetic exposure to SARS-CoV-2

Frontiers in Immunology(2025)10.3389/fimmu.2025.1488851
Top 20%
1.0DataRank
Top 20%45 citations

Marissa Vignali, Mark Klinger, Jennifer N. Dines, Ian M. Kaplan, Emily Svejnoha +24 more

HLA tapasin independence: broader peptide repertoire and HIV control

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2013554117
N/A
0.670DataRank · unranked
86 citations

Mathias Viard, Vivek Naranbhai, Alba Grifoni, Wilfredo F. García-Beltrán, Marjan Akdag +23 more

Pre-treatment integrase inhibitor resistance is uncommon in antiretroviral therapy-naive individuals with HIV-1 subtype A1 and D infections in Uganda

AIDS(2021)10.1097/qad.0000000000002854
N/A
0.442DataRank · unranked
18 citations

Kimia Kamelian, Nicholas Musinguzi, Simone Kigozi, Yap Boum, Mwebesa Bwana +13 more

HLA-A*68

AIDS(2013)10.1097/qad.0b013e32836146cd
N/A
0.360DataRank · unranked
10 citations

Anette Stryhn, Mikkel Harndahl, Jonathan M. Carlson, Alasdair J. Leslie, Fabian Chen +7 more

Elevated HIV Infection of CD4 T Cells in MRKAd5 Vaccine Recipients Due to CD8 T Cells Targeting Adapted Epitopes

Journal of Virology(2021)10.1128/jvi.00160-21
N/A
0.312DataRank · unranked
7 citations

Sushma Boppana, Jonathan M. Carlson, Andrew Fioré-Gartland, Jacob K. Files, Jie Zeng +6 more

T-cell receptor sequencing identifies prior SARS-CoV-2 infection and correlates with neutralizing antibody titers and disease severity

medRxiv(2021)10.1101/2021.03.19.21251426
N/A
0DataRank · unranked
10 citations

Thomas M. Snyder, Sudeb C. Dalai, Rachel M. Gittelman, Jim Boonyaratanakornkit, Anna Wald +13 more

HLA-associated preadaptation in HIV Vif is associated with higher set point viral load and faster CD4+ decline in Zambian transmission pairs

AIDS(2021)10.1097/qad.0000000000002868
N/A
0DataRank · unranked
0 citations

Jonathan M. Carlson, Malinda Schaefer, Alfred Bere, William Kilembe, Susan Allen +2 more

T cell receptor sequencing identifies prior SARS-CoV-2 infection and correlates with neutralizing antibodies and disease severity

JCI Insight(2022)10.1172/jci.insight.150070
N/A
0DataRank · unranked
49 citations

Thomas M. Snyder, Sudeb C. Dalai, Rachel M. Gittelman, Jim Boonyaratanakornkit, Anna Wald +17 more

Immunosequencing of the T-cell receptor repertoire reveals signatures specific for diagnosis and characterization of early Lyme disease

medRxiv(2021)10.1101/2021.07.30.21261353
N/A
0DataRank · unranked
26 citations

Mitch Pesesky, Sudeb C. Dalai, Alison W. Rebman, Mark J. Soloski, Elizabeth J. Horn +12 more

HIV-1 adapts to HLA class II–associated selection pressure exerted by CD4 + and CD8 + T cells

Science Advances(2025)10.1126/sciadv.adr4238
N/A
0DataRank · unranked
3 citations

Jennifer Currenti, Keeley Crawford, Abha Chopra, Ramesh Ram, Louise Barnett +15 more