🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Shiwei Zheng

Shanghai Jiao Tong University

ORCID: 0000-0001-6682-6743

Also affiliated with Immunai (United States)

Biochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 13 papers. Top paper: “Spatial transcriptomics defines injury specific microenvironments and cellular interactions in kidney regeneration and disease”.

Spatial transcriptomics defines injury specific microenvironments and cellular interactions in kidney regeneration and disease

Nature Communications(2024)10.1038/s41467-024-51186-z

N/A

2.6DataRank · unranked

59 citations

Louisa M.S. Gerhardt, Jina Yun, Kari Koppitch, Katsuya Lex Colón, Henry Amrhein +7 more

Integrated analysis of multimodal single-cell data

Cell(2021)10.1016/j.cell.2021.04.048

N/A

1.4DataRank · unranked

15542 citations

Stephanie Hao, Erica Andersen-Nissen, William M. Mauck, Shiwei Zheng, Andrew Butler +23 more

Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors

Science(2017)10.1126/science.aah4573

N/A

1.2DataRank · unranked

2459 citations

Rahul Satija, Gary Reynolds, Siranush Sarkizova, Karthik Shekhar, James Fletcher +19 more

Integrated spatial genomics reveals global architecture of single nuclei

Nature(2021)10.1038/s41586-020-03126-2

N/A

0.915DataRank · unranked

446 citations

Jina Yun, Shiwei Zheng, Noah Ollikainen, Nico Pierson, Jonathan A. White +8 more

A vaccine targeting resistant tumours by dual T cell plus NK cell attack

Nature(2022)10.1038/s41586-022-04772-4

N/A

0.748DataRank · unranked

145 citations

Maxence O. Dellacherie, Aileen W. Li, Shiwei Zheng, Xixi Zhang, Miguel C. Sobral +12 more

Plasticity of Human Microglia and Brain Perivascular Macrophages in Aging and Alzheimer’s Disease

medRxiv(2023)10.1101/2023.10.25.23297558

N/A

0.548DataRank · unranked

17 citations

James M. Vicari, Christian Porras, Collin Spencer, Milos Pjanic, Xinyi Wang +30 more

Multiomic single-cell profiling identifies critical regulators of postnatal brain

Nature Genetics(2025)10.1038/s41588-025-02083-8

N/A

0.385DataRank · unranked

12 citations

Jaroslav Bendl, Xuan Cao, Xinyi Wang, Shiwei Zheng, Gabriel E. Hoffman +14 more

Targeting of the CD161 inhibitory receptor enhances T-cell–mediated immunity against hematological malignancies

Blood(2023)10.1182/blood.2023022882

N/A

0DataRank · unranked

21 citations

Byong H. Kang, Oleksandr Kyrysyuk, Shiwei Zheng, Hao Wang, Nathan D. Mathewson +9 more

Spatial transcriptomics defines injury-specific microenvironments in the adult mouse kidney and novel cellular interactions in regeneration and disease

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.22.568217

N/A

0DataRank · unranked

7 citations

Louisa M.S. Gerhardt, Jina Yun, Kari Koppitch, Katsuya Lex Colón, Henry Amrhein +6 more

Characterizing Spatially Continuous Variations in Tissue Microenvironment through Niche Trajectory Analysis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.23.590827

N/A

0DataRank · unranked

2 citations

Shiwei Zheng, Sujung Crystal Shin, Guo‐Cheng Yuan, Wen Wang

Integrated spatial genomics in tissues reveals invariant and cell type dependent nuclear architecture

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.26.441547

N/A

0DataRank · unranked

2 citations

Shiwei Zheng, Jina Yun, Sheel Shah, Nico Pierson, Jonathan A. White +5 more

ONTraC characterizes spatially continuous variations of tissue microenvironment through niche trajectory analysis

Genome biology(2025)10.1186/s13059-025-03588-5

N/A

0DataRank · unranked

4 citations

Shiwei Zheng, Sujung Crystal Shin, Joselyn Cristina Chávez-Fuentes, Guo‐Cheng Yuan, Wen Wang

Integrated analysis of multimodal single-cell data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.12.335331

N/A

0DataRank · unranked

485 citations

Stephanie Hao, Erica Andersen‐Nissen, William M. Mauck, Shiwei Zheng, Andrew Butler +20 more