🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Kexin Huang

Fudan University

ORCID: 0000-0001-6693-8390

Also affiliated with Sunesis (United States), Stanford University

Computer ScienceBiochemistry, Genetics and Molecular BiologyMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile
0.621Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Signals in the Cells: Multimodal and Contextualized Machine Learning Foundations for Therapeutics

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.12.598655
Top 32%
0.621DataRank
Top 32%14 citations

Xiang Lin, Michelle M. Li, Kexin Huang, Wenhao Gao, Tianfan Fu +4 more

Papers

Driven by 13 papers — median percentile 68. Top paper: “SpatialAgent: An autonomous AI agent for spatial biology”.

SpatialAgent: An autonomous AI agent for spatial biology

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.03.646459
N/A
1.5DataRank · unranked
47 citations

Yichun He, Paula P. Coelho, Matthew Bucci, Abbas Nazir, Bob Chen +35 more

Predicting transcriptional outcomes of novel multigene perturbations with GEARS

Nature Biotechnology(2023)10.1038/s41587-023-01905-6
N/A
0.866DataRank · unranked
321 citations

Kexin Huang, Jure Leskovec, Yusuf Roohani

A foundation model for clinician-centered drug repurposing

Nature Medicine(2024)10.1038/s41591-024-03233-x
N/A
0.785DataRank · unranked
186 citations

Payal Chandak, Qianwen Wang, Shreyas Havaldar, Akhil Vaid, Jure Leskovec +5 more

Biomni: A General-Purpose Biomedical AI Agent

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.30.656746
N/A
0.700DataRank · unranked
105 citations

Serena Zhang, Hanchen Wang, Yuanhao Qu, Yingzhou Lu, Yusuf Roohani +18 more

Signals in the Cells: Multimodal and Contextualized Machine Learning Foundations for Therapeutics

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.12.598655
Top 32%
0.621DataRank
Top 32%14 citations

Xiang Lin, Michelle M. Li, Kexin Huang, Wenhao Gao, Tianfan Fu +4 more

Sequential Optimal Experimental Design of Perturbation Screens Guided by Multi-modal Priors

Lecture Notes in Computer Science(2024)10.1007/978-1-0716-3989-4_2
N/A
0.416DataRank · unranked
7 citations

Romain Lopez, Jan-Christian Hütter, Takamasa Kudo, Antonio Rios, Prisca Liberali +2 more

Gene-embedding-based prediction and functional evaluation of perturbation expression responses with PRESAGE

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.03.657653
N/A
0.405DataRank · unranked
6 citations

Jacob Levine, Sepideh Maleki, Yong‐Ju Lee, Vladimir Ermakov, Lin Qiu +10 more

Uncertainty Quantification over Graph with Conformalized Graph Neural Networks

arXiv (Cornell University)(2023)10.48550/arxiv.2305.14535
N/A
0.396DataRank · unranked
13 citations

Ying Jin, Emmanuel J. Candès, Jure Leskovec, Kexin Huang

SPEAR

(2021)10.1145/3459930.3469530
N/A
0DataRank · unranked
0 citations

Cao Xiao, Kexin Huang, Lucas M. Glass, Jimeng Sun, Tianfan Fu

CASTER: Predicting Drug Interactions with Chemical Substructure Representation

Proceedings of the AAAI Conference on Artificial Intelligence(2020)10.1609/aaai.v34i01.5412
N/A
0DataRank · unranked
149 citations

Cao Xiao, Dô Trong Hoang, Lucas M. Glass, Jimeng Sun, Kexin Huang

DeepPurpose: a deep learning library for drug–target interaction prediction

Bioinformatics(2020)10.1093/bioinformatics/btaa1005
N/A
0DataRank · unranked
484 citations

Tianfan Fu, Lucas M. Glass, Marinka Zitnik, Cao Xiao, Jimeng Sun +1 more

SumGNN: multi-typed drug interaction prediction via efficient knowledge graph summarization

Bioinformatics(2021)10.1093/bioinformatics/btab207
N/A
0DataRank · unranked
177 citations

Kexin Huang, Chao Zhang, Lucas M. Glass, Jimeng Sun, Cao Xiao +1 more

Machine learning applications for therapeutic tasks with genomics data

Patterns(2021)10.1016/j.patter.2021.100328
N/A
0DataRank · unranked
47 citations

Cao Xiao, Lucas M. Glass, Cathy W. Critchlow, Greg Gibson, Jimeng Sun +1 more