Srigokul Upadhyayula

Also affiliated with Chan Zuckerberg Initiative (United States), University of San Francisco, University of California, Berkeley

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 20 papers. Top paper: “How to build the virtual cell with artificial intelligence: Priorities and opportunities”.

How to build the virtual cell with artificial intelligence: Priorities and opportunities

Cell(2024)10.1016/j.cell.2024.11.015

N/A

0.861DataRank · unranked

310 citations

Yusuf Roohani, Yanay Rosen, Ankit Gupta, Xikun Zhang, Marcel Roed +37 more

Origin of wiring specificity in an olfactory map revealed by neuron type–specific, time-lapse imaging of dendrite targeting

eLife(2023)10.7554/elife.85521

N/A

0.497DataRank · unranked

18 citations

Tongchao Li, Tian-Ming Fu, Gaoxiang Liu, Cheng Lyu, Sayeh Kohani +6 more

A proliferative to invasive switch is mediated by srGAP1 downregulation through the activation of TGF-β2 signaling

Cell Reports(2022)10.1016/j.celrep.2022.111358

N/A

0.483DataRank · unranked

24 citations

Majo J. Gacha-Garay, Kathryn A. Larkin, Rebecca C. Adikes, Julie S. Di Martino, C. H. Chien +14 more

Neural space–time model for dynamic multi-shot imaging

Nature Methods(2024)10.1038/s41592-024-02417-0

N/A

0.477DataRank · unranked

23 citations

Nikita S. Divekar, James K. Nuñez, Srigokul Upadhyayula, Laura Waller, Ruiming Cao

Adherens junction serves to generate cryptic lamellipodia required for collective migration of epithelial cells

10.1101/2020.04.20.052118

N/A

0.208DataRank · unranked

3 citations

Sylvain Hiver, Takaki Yamamoto, Tatsuo Shibata, Srigokul Upadhyayula, Yuko Mimori-Kiyosue +2 more

Fourier-based three-dimensional multistage transformer for aberration correction in multicellular specimens

Nature Methods(2025)10.1038/s41592-025-02844-7

N/A

0.165DataRank · unranked

2 citations

Daniel E. Milkie, Gaoxiang Liu, Cyna Shirazinejad, Jason Li Hong, Kemal Achour +15 more

Origin of wiring specificity in an olfactory map: dendrite targeting of projection neurons

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.28.522173

N/A

0DataRank · unranked

0 citations

Tongchao Li, Tian-Ming Fu, Gaoxiang Liu, Cheng Lyu, Sayeh Kohani +6 more

A Proliferative to Invasive Switch is Mediated by srGAP1 Downregulation Through the Activation of TGFβ2 Signaling

SSRN Electronic Journal(2021)10.2139/ssrn.3891792

N/A

0DataRank · unranked

0 citations

María José Gacha Garay, Kathryn Larkin, Rebecca C. Adikes, Julie S. Di Martino, C. H. Chien +13 more

Visualizing PIEZO1 Localization and Activity in hiPSC-Derived Single Cells and Organoids with HaloTag Technology

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.22.573117

N/A

0DataRank · unranked

6 citations

Ignasi Casanellas, Elizabeth L. Evans, Jamison L. Nourse, George D. Dickinson, Gaoxiang Liu +12 more

Torques within and outside the human spindle balance twist at anaphase

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.10.570990

N/A

0DataRank · unranked

4 citations

Yifei He, Nathan Cho, Gaoxiang Liu, Jonathan Fernandes, Caleb J. Rux +6 more

Rescue of stalled clathrin-mediated endocytosis by asymmetric Arp2/3-mediated actin assembly

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.16.452693

N/A

0DataRank · unranked

5 citations

Cyna Shirazinejad, Bowen Wang, Amy Yan, Johannes Schöneberg, Srigokul Upadhyayula +3 more

Inherited nuclear pore substructures template post-mitotic pore assembly

Developmental Cell(2021)10.1016/j.devcel.2021.05.015

N/A

0DataRank · unranked

29 citations

Srigokul Upadhyayula, Justin R. Houser, Kangmin He, Wesley Skillern, Gustavo Scanavachi +8 more

Torques within and outside the human spindle balance twist at anaphase

The Journal of Cell Biology(2024)10.1083/jcb.202312046

N/A

0DataRank · unranked

3 citations

Nathan Cho, Yifei He, Gaoxiang Liu, Jonathan Fernandes, Caleb J. Rux +6 more

Molecularly Distinct Clathrin-Coated Pits Differentially Impact EGFR Fate and Signaling

Cell Reports(2024)10.1016/j.celrep.2024.114970

N/A

0DataRank · unranked

1 citations

Veronica Algisi, Alexia Conte, Andrea Raimondi, Mithun Pasham, Srigokul Upadhyayula +16 more

Neural space-time model for dynamic scene recovery in multi-shot computational imaging systems

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.16.575950

N/A

0DataRank · unranked

2 citations

Nikita S. Divekar, J. González Núñez, Srigokul Upadhyayula, Laura Waller, Ruiming Cao

Nanoscale volumetric fluorescence imaging via photochemical sectioning

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.01.605857

N/A

0DataRank · unranked

2 citations

Xiongtao Ruan, Gaoxiang Liu, Daniel E. Milkie, Wenping Li, Eric Betzig +3 more

Visualizing PIEZO1 localization and activity in hiPSC-derived single cells and organoids with HaloTag technology

Nature Communications(2025)10.1038/s41467-025-59150-1

N/A

0DataRank · unranked

10 citations

Ignasi Casanellas, Elizabeth L. Evans, Jamison L. Nourse, George D. Dickinson, Gaoxiang Liu +12 more

Multicilia dynamically transduce Sonic Hedgehog signaling to regulate choroid plexus functions

Cell Reports(2025)10.1016/j.celrep.2025.115383

N/A

0DataRank · unranked

9 citations

Rui Song, Shibo Jin, Song Pang, Aleksandra Jovanović, Adam Zimmerman +17 more

Branched actin networks are organized for asymmetric force production during clathrin-mediated endocytosis in mammalian cells

Nature Communications(2022)10.1038/s41467-022-31207-5

N/A

0DataRank · unranked

41 citations

Cyna Shirazinejad, Bowen Wang, Amy Yan, Johannes Schöneberg, Srigokul Upadhyayula +3 more

A highly homogeneous polymer composed of tetrahedron-like monomers for high-isotropy expansion microscopy

Nature Nanotechnology(2021)10.1038/s41565-021-00875-7

N/A

0DataRank · unranked

89 citations

Chih-Chieh (Jay) Yu, Linyi Gao, Kiryl D. Piatkevich, Rachael L. Neve, James B. Munro +3 more