Mark M. Davis

Also affiliated with Stanford University

Immunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.6Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: Results from the IMPACC study

EBioMedicine(2022)10.1016/j.ebiom.2022.104208

Top 16%

1.3DataRank

Top 16%73 citations

Joanna Schaenman, Naresh Doni Jayavelu, Carly E. Milliren, Carolyn S. Calfee, Charles B. Cairns +53 more

Papers

Driven by 91 papers — median percentile 57. Top paper: “Multi-Omics Resolves a Sharp Disease-State Shift between Mild and Moderate COVID-19”.

Multi-Omics Resolves a Sharp Disease-State Shift between Mild and Moderate COVID-19

Cell(2020)10.1016/j.cell.2020.10.037

N/A

9.7DataRank · unranked

643 citations

Daniel Chen, Dan Yuan, Christopher Lausted, Jongchan Choi, Chengzhen L. Dai +50 more

KIR + CD8 + T cells suppress pathogenic T cells and are active in autoimmune diseases and COVID-19

Science(2022)10.1126/science.abi9591

N/A

7.1DataRank · unranked

250 citations

Maxim Zaslavsky, Yapeng Su, Jing Guo, Michael J. Sikora, Vincent van Unen +31 more

Defective Signaling in the JAK-STAT Pathway Tracks with Chronic Inflammation and Cardiovascular Risk in Aging Humans

Cell Systems(2016)10.1016/j.cels.2016.09.009

N/A

4.4DataRank · unranked

156 citations

David Furman, Francois Hadad, PATRICIA A. LOVELACE, Ying-Wen Huang, Yael Rosenberg-Hasson +13 more

The single-cell epigenomic and transcriptional landscape of immunity to influenza vaccination

Cell(2021)10.1016/j.cell.2021.05.039

N/A

4.1DataRank · unranked

285 citations

Michele Donato, Alex Kuo, Tal Ashuach, Shakti Gupta, Chunfeng Li +18 more

Sialylated IgG induces the transcription factor REST in alveolar macrophages to protect against lung inflammation and severe influenza disease

Immunity(2024)10.1016/j.immuni.2024.10.002

N/A

1.6DataRank · unranked

25 citations

Bowie Yik-Ling Cheng, Desmond L. Edwards, Joseph C. González, David Kung‐Chun Chiu, Hong Zheng +18 more

Transplantomics and Biomarkers in Organ Transplantation: A Report From the First International Conference

Transplantation(2011)10.1097/tp.0b013e3182105fb8

N/A

1.5DataRank · unranked

35 citations

Jacqueline Benjamin, Atul Janardhan Butte, Mark M. Davis, Kathryn Wood, Jeremy Chapman +4 more

Upregulation of CD47 Is a Host Checkpoint Response to Pathogen Recognition

mBio(2020)10.1128/mbio.01293-20

N/A

1.4DataRank · unranked

41 citations

Laughing Bear Torrez Dulgeroff, Lara Myers, Lamin B. Cham, Katrin D. Mayer-Barber, Andrea C. Bohrer +32 more

Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: Results from the IMPACC study

EBioMedicine(2022)10.1016/j.ebiom.2022.104208

Top 16%

1.3DataRank

Top 16%73 citations

Joanna Schaenman, Naresh Doni Jayavelu, Carly E. Milliren, Carolyn S. Calfee, Charles B. Cairns +53 more

Immunophenotyping assessment in a COVID-19 cohort (IMPACC): A prospective longitudinal study

Science Immunology(2021)10.1126/sciimmunol.abf3733

Top 17%

1.2DataRank

Top 17%74 citations

Nadine Rouphael, Holden T. Maecker, Ruth R. Montgomery, Joann Diray‐Arce, Steven H. Kleinstein +51 more

Signatures of immune dysfunction in HIV and HCV infection share features with chronic inflammation in aging and persist after viral reduction or elimination

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2022928118

N/A

1.2DataRank · unranked

33 citations

Edward A. Pham, Huixun Du, Francesco Vallania, Benjamin Fram, Kevin Pérez +11 more

TOWARDS A CYTOKlNE-CELL INTERACTION KNOWLEDGEBASE OF THE ADAPTIVE IMMUNE SYSTEM

Biocomputing 2009(2008)10.1142/9789812836939_0041

N/A

1.1DataRank · unranked

15 citations

OFIR GOLDBERGER, Yael Garten, Yael Rosenberg-Hasson, PATRICIA A. LOVELACE, DAVID L. HIRSCHBERG +5 more

Cell type–specific gene expression differences in complex tissues

Nature Methods(2010)10.1038/nmeth.1439

N/A

0.946DataRank · unranked

546 citations

Robert Tibshirani, Purvesh Khatri, Dale L. Bodian, Frank Staedtler, Nicholas M Perry +6 more

Progenitor identification and SARS-CoV-2 infection in human distal lung organoids

Nature(2020)10.1038/s41586-020-3014-1

N/A

0.909DataRank · unranked

427 citations

S. S. Choi, Arjun Rustagi, Junjie Zhu, Vincent van Unen, Sean de la O +29 more

CXCL13 is a plasma biomarker of germinal center activity

Proceedings of the National Academy of Sciences(2016)10.1073/pnas.1520112113

N/A

0.884DataRank · unranked

361 citations

Madelene Lindqvist, Antje Heit, Jennifer E. Wu, Samantha M. Reiss, Kayla Kendric +30 more

Learning from HIV-1 to predict the immunogenicity of T cell epitopes in SARS-CoV-2

iScience(2021)10.1016/j.isci.2021.102311

N/A

0.868DataRank · unranked

16 citations

Zhilin Chen, Assaf Amitai, Julia Doelger, Vamsee Mallajosyula, Emily Sundquist +7 more

A human autoimmune organoid model reveals IL-7 function in coeliac disease

Nature(2024)10.1038/s41586-024-07716-2

N/A

0.624DataRank · unranked

63 citations

Vincent van Unen, Zhongqi Lin, Steven M. Chirieleison, N.-T. Ha, Arpit Batish +26 more

NK-like CD8 + γδ T cells are expanded in persistent Mycobacterium tuberculosis infection

Science Immunology(2023)10.1126/sciimmunol.ade3525

N/A

0.617DataRank · unranked

60 citations

John R. Valainis, Megha Dubey, Lotta von Boehmer, Elsa Solà, Julie Wilhelmy +12 more

Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC study

Nature Communications(2024)10.1038/s41467-023-44090-5

N/A

0.617DataRank · unranked

60 citations

Naresh Doni Jayavelu, Shanshan Liu, Esther Melamed, Carly E. Milliren, Jingjing Qi +95 more

Antigen-Specific T-Cell Activation Distinguishes between Recent and Remote Tuberculosis Infection

American Journal of Respiratory and Critical Care Medicine(2021)10.1164/rccm.202007-2686oc

N/A

0.598DataRank · unranked

53 citations

Munyaradzi Musvosvi, Virginie Rozot, Boitumelo Mosito, Timothy D. Reid, Constance Schreuder +10 more

mRNA vaccination compared to infection elicits an IgG-predominant response with greater SARS-CoV-2 specificity and similar decrease in variant spike recognition

medRxiv(2021)10.1101/2021.04.05.21254952

N/A

0.593DataRank · unranked

51 citations

Sandra C. A. Nielsen, Prabhu S. Arunachalam, Fan Yang, Ramona A. Hoh, Oliver F. Wirz +15 more

Multiomic analysis reveals cell-type-specific molecular determinants of COVID-19 severity

Cell Systems(2022)10.1016/j.cels.2022.05.007

N/A

0.546DataRank · unranked

37 citations

Johnathan Cooper‐Knock, Annika K. Weimer, Minyi Shi, Lina Kozhaya, Derya Unutmaz +15 more

Impaired innate and adaptive immune responses to BNT162b2 SARS-CoV-2 vaccination in systemic lupus erythematosus

JCI Insight(2024)10.1172/jci.insight.176556

N/A

0.532DataRank · unranked

14 citations

Hong Zheng, Yashaar Chaichian, Prabhu S. Arunachalam, Gayathri Swaminathan, Alec Eschholz +17 more

Distinct immune characteristics distinguish hereditary and idiopathic chronic pancreatitis

Journal of Clinical Investigation(2020)10.1172/jci134066

N/A

0.520DataRank · unranked

31 citations

Julia Z. Adamska, Hong Namkoong, Melena D. Bellin, Joshua J. Wilhelm, Gregory L. Szot +5 more

Spatial and multiomics analysis of human and mouse lung adenocarcinoma precursors reveals TIM-3 as a putative target for precancer interception

Cancer Cell(2025)10.1016/j.ccell.2025.04.003

N/A

0.505DataRank · unranked

28 citations

Pingjun Chen, Muhammad Aminu, Jiànróng Lǐ, Junya Fujimoto, Yanhua Tian +47 more

IgM N-glycosylation correlates with COVID-19 severity and rate of complement deposition

Nature Communications(2024)10.1038/s41467-023-44211-0

N/A

0.505DataRank · unranked

28 citations

Kyra Woloszczuk, Jintong Hou, Jennifer Connors, Gina Cusimano, Matthew R. Bell +94 more

SIMON: Open-Source Knowledge Discovery Platform

Patterns(2021)10.1016/j.patter.2020.100178

N/A

0.483DataRank · unranked

24 citations

Ivan Tomic, Levi Waldron, Ludwig Geistlinger, Max Kühn, Rachel L. Spreng +13 more

Expression of specific HLA class II alleles is associated with an increased risk for active tuberculosis and a distinct gene expression profile

HLA(2022)10.1111/tan.14880

N/A

0.483DataRank · unranked

24 citations

Rebecca Kuan, Elizabeth J. Phillips, S. Mallal, Virginie Rozot, Mark M. Davis +6 more

Oxidative stress is a shared characteristic of ME/CFS and Long COVID

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2426564122

N/A

0.477DataRank · unranked

23 citations

Julie Wilhelmy, Ellis J. Curtis, Basil Michael, Layla Cervantes, Vamsee Mallajosyula +9 more

Single cell multi-omic analysis identifies key genes differentially expressed in innate lymphoid cells from COVID-19 patients

Frontiers in Immunology(2024)10.3389/fimmu.2024.1374828

N/A

0.411DataRank · unranked

8 citations

Iris Chang, Xiaorui Han, Ziyuan He, Zsolt István Komlósi, Xuhuai Ji +10 more

Extracting Cell-type-specific Gene Expression Differences from Complex Tissues

Clinical Immunology(2010)10.1016/j.clim.2010.03.037

N/A

0.385DataRank · unranked

3 citations

Alexander Gaidarski, Robert Tibshirani, Purvesh Khatri, Mark Davis, Shai S. Shen-Orr +3 more

Mtb HLA-E-tetramer-sorted CD8+ T cells have a diverse TCR repertoire

iScience(2024)10.1016/j.isci.2024.109233

N/A

0.330DataRank · unranked

8 citations

Anne M H F Drittij, Calinda K. E. Dingenouts, Kees L. M. C. Franken, Vincent van Unen, Krista E. van Meijgaarden +10 more

Entropic analysis of antigen-specific CDR3 domains identifies essential binding motifs shared by CDR3s with different antigen specificities

Cell Systems(2023)10.1016/j.cels.2023.03.001

N/A

0.312DataRank · unranked

7 citations

William Chour, Diana C. DeLucia, Yapeng Su, Ana Jimena Pavlovitch-Bedzyk, Raymond T. Ng +5 more

Minimal Information about MHC Multimers (MIAMM)

The Journal of Immunology(2022)10.4049/jimmunol.2100961

Top 70%

0.165DataRank

Top 70%2 citations

Apurva Mody, James A. Overton, Søren Buus, Stephen T. Haley, Alessandro Sette +7 more

Systematic discovery of receptor-ligand biology by engineered cell entry and single-cell genomics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.13.472464

N/A

0.149DataRank · unranked

1 citations

Quanming Shi, Julia A. Belk, Kathryn E. Yost, Kevin R. Parker, Huang Huang +5 more

A Systemic age dependent defect in immune-cell signaling response induced by inflammation (138.2)

The Journal of Immunology(2010)10.4049/jimmunol.184.supp.138.2

N/A

0.137DataRank · unranked

1 citations

David Furman, Brian Kidd, Mark Davis, Shai S. Shen-Orr, Holden T. Maecker +3 more

T cell receptor repertoires associated with control and disease progression following Mycobacterium tuberculosis infection

Nature Medicine(2023)10.1038/s41591-022-02110-9

N/A

0DataRank · unranked

100 citations

Huang Huang, Chunlin Wang, Qiong Xia, Virginie Rozot, Akshaya Krishnan +86 more

Spheromers reveal robust T cell responses to the Pfizer/BioNTech vaccine and attenuated peripheral CD8+ T cell responses post SARS-CoV-2 infection

Immunity(2023)10.1016/j.immuni.2023.03.005

N/A

0DataRank · unranked

84 citations

Vamsee Mallajosyula, Prabhu S. Arunachalam, Kattria van der Ploeg, Monali Manohar, Katharina Röltgen +22 more

Integrated single-cell chromatin and transcriptomic analyses of human scalp identify gene-regulatory programs and critical cell types for hair and skin diseases

Nature Genetics(2023)10.1038/s41588-023-01445-4

N/A

0DataRank · unranked

73 citations

Chen Wang, Justin Ko, Eon J. Rios, Sumaira Z. Aasi, Mark M. Davis +3 more

Acute Respiratory Illness Is Associated with Memory T Cell Differentiation and Other Immune Cell Changes in an Age-Associated Manner

ImmunoHorizons(2023)10.4049/immunohorizons.2300050

N/A

0DataRank · unranked

3 citations

Tyson H. Holmes, Sofia Maysel-Auslender, Scott D. Boyd, Cornelia L. Dekker, Mark M. Davis +2 more

Disrupted memory T cell expansion in HIV-exposed uninfected infants is preceded by premature skewing of T cell receptor clonality

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.19.540713

N/A

0DataRank · unranked

0 citations

Aaron J. Wilk, Susan Canny, Thanmayi Ranganath, Berenice Alinde, Florian Rubelt +7 more

HLA-DQB105 subtypes and not DRB110:01 mediates risk in anti-IgLON5 disease

Brain(2024)10.1093/brain/awae048

N/A

0DataRank · unranked

42 citations

Sergio Muñiz‐Castrillo, Lídia Sabater, Vicente Peris-Sempere, Vamsee Mallajosyula, Luo Guo +37 more

γδ T cell antigen receptor polyspecificity enables T cell responses to a broad range of immune challenges

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2315592121

N/A

0DataRank · unranked

36 citations

Roshni Roy Chowdhury, Vamsee Mallajosyula, Jianming Xie, Megha Dubey, Yuanyuan Liu +16 more

Coupling antigens from multiple subtypes of influenza can broaden antibody and T cell responses

Science(2024)10.1126/science.adi2396

N/A

0DataRank · unranked

34 citations

Saborni Chakraborty, Elsa Solà, Ray Fong, Vishnu Shankar, Fei Gao +11 more

GIMAP5 deficiency reveals a mammalian ceramide-driven longevity assurance pathway

Nature Immunology(2024)10.1038/s41590-023-01691-y

N/A

0DataRank · unranked

13 citations

Michael Leney-Greene, Matthew Lynberg, Justin Q. Gabrielski, Xijin Xu, Benjamin Schwarz +69 more

Premature skewing of T cell receptor clonality and delayed memory expansion in HIV-exposed infants

Nature Communications(2024)10.1038/s41467-024-47955-5

N/A

0DataRank · unranked

6 citations

Aaron J. Wilk, Susan Canny, Thanmayi Ranganath, Berenice Alinde, Florian Rubelt +7 more

Elucidating allergic reaction mechanisms in response to SARS‐CoV‐2 mRNA vaccination in adults

Allergy(2024)10.1111/all.16231

N/A

0DataRank · unranked

7 citations

Janice A. Layhadi, Dennis E. Hourcade, William T. Fulton, Tiak Ju Tan, Diane Dunham +31 more

Cell-surface Milieu Remodeling in Human Dendritic Cell Activation

The Journal of Immunology(2024)10.4049/jimmunol.2400089

N/A

0DataRank · unranked

5 citations

Charles Xu, Zuzhi Jiang, Shihong Max Gao, Qian Yin, Wei Luo +4 more

Variation in the Human Immune System Is Largely Driven by Non-Heritable Influences

UNC Libraries(2020)10.17615/e3s3-zc17

N/A

0DataRank · unranked

0 citations

the Immunological Genome Project Consortium, Tianxiang Gao, Sanchita Bhattacharya, Cesar J.Lopez Angel, David Furman +7 more

Embracing Interpersonal Variability of Microbiome in Precision Medicine

Phenomics(2025)10.1007/s43657-024-00201-w

N/A

0DataRank · unranked

7 citations

Xin Chen, Mark M. Davis, Michael P. Snyder, Xin Zhou

Baseline predictors for 28-day COVID-19 severity and mortality among hospitalized patients: results from the IMPACC study

Frontiers in Medicine(2025)10.3389/fmed.2025.1604388

N/A

0DataRank · unranked

1 citations

Benjamin Haslund-Gourley, Joann Diray‐Arce, Annmarie Hoch, Nadine Rouphael, Patrice M. Becker +49 more

The Immune Microenvironment of Transplant Glomerulitis

Kidney International Reports(2025)10.1016/j.ekir.2025.06.015

N/A

0DataRank · unranked

1 citations

Jonathan S. Maltzman, Adrienne H. Long, Renumathy Dhanasekaran, Vishnu Shankar, Azam Mohsin +6 more

Machine learning models predict long COVID outcomes based on baseline clinical and immunologic factors

medRxiv(2025)10.1101/2025.02.12.25322164

N/A

0DataRank · unranked

3 citations

Hady Samaha, S. Wimalasena, Annmarie Hoch, Jeremy P. Gygi, Gisela Gabernet +45 more

Impact of age and prior COVID-19 on the response to influenza a components in the 2020–2021 Fluzone vaccine

Vaccine(2025)10.1016/j.vaccine.2025.127171

N/A

0DataRank · unranked

0 citations

Alexandra Lee, Qinshan Gao, Joseph C. González, Courtney Scallan, R. Sharon Chinthrajah +6 more

Empiric Azithromycin in COVID-19 Impacts the Respiratory Microbiome and Antimicrobial Resistome without Anti-inflammatory Benefit

Research Square(2025)10.21203/rs.3.rs-6875205/v1

N/A

0DataRank · unranked

0 citations

Abigail Glascock, Cole Maguire, Hoang Van Phan, Emily Lydon, Carolyn S. Calfee +49 more

Batch Correction and Comparison of Intracellular Signaling Among Multiple Rheumatic and Inflammatory Diseases

Journal of Probability and Statistics(2025)10.1155/jpas/5014500

N/A

0DataRank · unranked

0 citations

Michael Couse, Yael Rosenberg‐Hasson, Rosemary Fernandez, Ajay Fernandez, Kavita Mathi +10 more

Age-related BCR heavy chain repertoire changes in young and older adults tracked for a decade 9178

The Journal of Immunology(2025)10.1093/jimmun/vkaf283.2616

N/A

0DataRank · unranked

0 citations

Artem Mikelov, Ji-Yeun Lee, Katharina Röltgen, Fan Yang, Mark M. Davis +3 more

Employment Changes following Breast Cancer Diagnosis: The Effects of Race and Place

UNC Libraries(2024)10.17615/nhn9-z789

N/A

0DataRank · unranked

0 citations

S.B. Wheeler, Robin C. Vanderpool, M.A. Troester, Mark M. Davis, J.S. Rotter +5 more

Immunological response in normal healthy twins across age

Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology(2010)10.1145/1854776.1854904

N/A

0DataRank · unranked

0 citations

Gary E. Swan, Martin S. Angst, Atul Janardhan Butte, Mark M. Davis, Shai S. Shen-Orr +4 more

A Systemic Age Dependent Defect in Immune-cell Signaling Response is Associated with Longevity Biomarkers

Clinical Immunology(2010)10.1016/j.clim.2010.03.066

N/A

0DataRank · unranked

0 citations

David Furman, Brian Kidd, Mark Davis, Shai S. Shen-Orr, Holden T. Maecker +3 more

F.40. Quantitative Assessment of the Goodness-of-fit of Mouse Models to Human Diseases

Clinical Immunology(2009)10.1016/j.clim.2009.03.305

N/A

0DataRank · unranked

0 citations

Mark Davis, Shai S. Shen-Orr, Atul Janardhan Butte, Mark M. Davis

An Integrated Multi-omic Single-Cell Atlas of Human B Cell Identity

Immunity(2020)10.1016/j.immuni.2020.06.013

N/A

0DataRank · unranked

265 citations

Albert G. Tsai, John Paul Oliveria, Felix J. Hartmann, Samuel C. Kimmey, Ariel A. Calderon +6 more

Cardiovascular Complications in Patients with COVID-19: Consequences of Viral Toxicities and Host Immune Response

Current Cardiology Reports(2020)10.1007/s11886-020-01292-3

N/A

0DataRank · unranked

225 citations

June‐Wha Rhee, Paul Cheng, Sarah Waliany, Amy Chang, Ronald Witteles +5 more

Immune Checkpoint Inhibitor Cardiotoxicity: Understanding Basic Mechanisms and Clinical Characteristics and Finding a Cure

The Annual Review of Pharmacology and Toxicology(2020)10.1146/annurev-pharmtox-010919-023451

N/A

0DataRank · unranked

74 citations

Daniel Lee, Ronald Witteles, Joel W. Neal, Patricia K. Nguyen, Mark M. Davis +5 more

Regulation of peanut-specific CD8+ T cells from nonallergic individuals

Journal of Allergy and Clinical Immunology(2020)10.1016/j.jaci.2020.07.032

N/A

0DataRank · unranked

7 citations

Xiaoying Zhou, Shu Chen Lyu, Mark M. Davis, Kari C. Nadeau, Wong Yu

Multiomic Immunophenotyping of COVID-19 Patients Reveals Early Infection Trajectories

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.27.224063

N/A

0DataRank · unranked

17 citations

Daniel Chen, Christopher Lausted, Dan Yuan, Jongchan Choi, Cheng Dai +44 more

Hypoimmunogenic Derivatives of Induced Pluripotent Stem Cells Evade Immune Rejection in Fully Immunocompetent Allogeneic Recipients

The Journal of Heart and Lung Transplantation(2020)10.1016/j.healun.2020.01.749

N/A

0DataRank · unranked

0 citations

T. Deuse, Alessia Gravina, D. Wang, Grigol Tediashvili, Chandrav De +8 more

Expression of specific inflammasome gene modules stratifies older individuals into two extreme clinical and immunological states

UNC Libraries(2020)10.17615/hwxa-sr80

N/A

0DataRank · unranked

0 citations

David Furman, Lydia Lartigue, Matthew H. Spitzer, Gabriela K. Fragiadakis, Jean‐François Moreau +15 more

Cytomegalovirus infection enhances the immune response to influenza

UNC Libraries(2020)10.17615/yb5d-rf66

N/A

0DataRank · unranked

0 citations

David Furman, Shalini Sharma, Cornelia L. Dekker, Brian Kidd, Shai S. Shen-Orr +7 more

Systems vaccinology of the BNT162b2 mRNA vaccine in humans

Nature(2021)10.1038/s41586-021-03791-x

N/A

0DataRank · unranked

582 citations

Madeleine Scott, Thomas Hagan, Chunfeng Li, Yupeng Feng, Florian Wimmers +33 more

Modeling human adaptive immune responses with tonsil organoids

Nature Medicine(2021)10.1038/s41591-020-01145-0

N/A

0DataRank · unranked

326 citations

Ameen A. Salahudeen, Christian M. Constantz, Ben S. Wendel, Michael M. Lyons, Vamsee Mallajosyula +25 more

CD8 + T cells specific for conserved coronavirus epitopes correlate with milder disease in patients with COVID-19

Science Immunology(2021)10.1126/sciimmunol.abg5669

N/A

0DataRank · unranked

175 citations

Conner Ganjavi, Saborni Chakraborty, Alana M. McSween, Ana Jimena Pavlovitch-Bedzyk, Julie Wilhelmy +5 more

Integrated analysis of plasma and single immune cells uncovers metabolic changes in individuals with COVID-19

Nature Biotechnology(2021)10.1038/s41587-021-01020-4

N/A

0DataRank · unranked

119 citations

Yapeng Su, Priyanka Baloni, Daniel Chen, Ana Jimena Pavlovitch-Bedzyk, Dan Yuan +19 more

Alloantigen-specific type 1 regulatory T cells suppress through CTLA-4 and PD-1 pathways and persist long-term in patients

Science Translational Medicine(2021)10.1126/scitranslmed.abf5264

N/A

0DataRank · unranked

67 citations

Alma‐Martina Cepika, Rajni Agarwal‐Hashmi, Gopin Saini, Molly Javier Uyeda, David M. Louis +17 more

Aging and CMV discordance are associated with increased immune diversity between monozygotic twins

Immunity & Ageing(2021)10.1186/s12979-021-00216-1

N/A

0DataRank · unranked

38 citations

Holden T. Maecker, Petter Brodin, Unni C. Nygaard, Shu Chen Lyu, Mark M. Davis +3 more

Systems Immunology: Revealing Influenza Immunological Imprint

Viruses(2021)10.3390/v13050948

N/A

0DataRank · unranked

14 citations

Andrew J. Pollard, Mark M. Davis, Adriana Tomić

Common and rare variant analyses combined with single-cell multiomics reveal cell-type-specific molecular mechanisms of COVID-19 severity

medRxiv(2021)10.1101/2021.06.15.21258703

N/A

0DataRank · unranked

7 citations

Johnathan Cooper‐Knock, Annika K. Weimer, Calum Harvey, Thomas Julian, Cheng Wang +18 more

Heterogeneous immunological recovery trajectories revealed in post-acute COVID-19

medRxiv(2021)10.1101/2021.03.19.21254004

N/A

0DataRank · unranked

3 citations

Dan Yuan, Daniel Chen, Kai Wang, Jongchan Choi, Chengzhen L. Dai +51 more

Single-cell sequencing unveils distinct immune microenvironment with CCR6-CCL20 crosstalk in human chronic pancreatitis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.05.438347

N/A

0DataRank · unranked

3 citations

Hong Namkoong, Yan Yang, Huang Huang, David Heller, Gregory L. Szot +5 more

Single-cell analysis of the epigenomic and transcriptional landscape of innate immunity to seasonal and adjuvanted pandemic influenza vaccination in humans

medRxiv(2021)10.1101/2021.05.24.21253087

N/A

0DataRank · unranked

2 citations

Michele Donato, Alex Kuo, Tal Ashuach, Shakti Gupta, Chunfeng Li +18 more

The role of antigen recognition in the γδ T cell response at the controlled stage of M. tuberculosis infection

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.14.460324

N/A

0DataRank · unranked

2 citations

John R. Valainis, Oliver Kask, Mané Ohanyan, Meng Sun, Huang Huang +10 more

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