Stacey D. Finley

Also affiliated with University of Southern California

Biochemistry, Genetics and Molecular BiologyMathematicsImmunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 19 papers. Top paper: “A field guide to cultivating computational biology”.

A field guide to cultivating computational biology

PLOS Biology(2021)10.1371/journal.pbio.3001419

N/A

1.3DataRank · unranked

22 citations

Casey S. Greene, Piero Carninci, Benilton S. Carvalho, Michiel de Hoon, Stacey D. Finley +11 more

A field guide to cultivating computational biology

arXiv (Cornell University)(2021)10.48550/arxiv.2104.11364

N/A

0.104DataRank · unranked

1 citations

Casey S. Greene, Piero Carnici, Benilton S. Carvalho, Michiel de Hoon, Stacey D. Finley +9 more

ERK Activation in CAR T Cells Is Amplified by CD28-Mediated Increase in CD3ζ Phosphorylation

iScience(2020)10.1016/j.isci.2020.101023

N/A

0DataRank · unranked

39 citations

Elizabeth L. Siegler, Pin Wang, Stacey D. Finley, Jennifer A. Rohrs

Fund Black scientists

Cell(2021)10.1016/j.cell.2021.01.011

N/A

0DataRank · unranked

143 citations

Kristyn S. Masters, P. I. Imoukhuede, Karmella A. Haynes, Lori A. Setton, Elizabeth Cosgriff‐Hernandez +14 more

Elucidating tumor-stromal metabolic crosstalk in colorectal cancer through integration of constraint-based models and LC-MS metabolomics

Metabolic Engineering(2021)10.1016/j.ymben.2021.11.006

N/A

0DataRank · unranked

28 citations

Alireza Delfarah, Patrick E. Gelbach, Emma J. Fong, Paul Macklin, Shannon M. Mumenthaler +3 more

Elucidating Tumor-stromal Metabolic Crosstalk in Colorectal Cancer through Integration of Constraint-Based Models and LC-MS Metabolomics

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.28.446227

N/A

0DataRank · unranked

2 citations

Alireza Delfarah, Patrick E. Gelbach, Emma J. Fong, Paul Macklin, Shannon M. Mumenthaler +3 more

Kinetic and data-driven modeling of pancreatic β-cell central carbon metabolism and insulin secretion

PLoS Computational Biology(2022)10.1371/journal.pcbi.1010555

N/A

0DataRank · unranked

13 citations

Dongqing Zheng, Scott E. Fraser, Kate L. White, Nicholas A. Graham, Stacey D. Finley +1 more

Genome-scale modeling predicts metabolic differences between macrophage subtypes in colorectal cancer

iScience(2023)10.1016/j.isci.2023.107569

N/A

0DataRank · unranked

15 citations

Stacey D. Finley, Patrick E. Gelbach

Proof‐of‐concept for incorporating mechanistic insights from multi‐omics analyses of polymyxin B in combination with chloramphenicol against Klebsiella pneumoniae

CPT Pharmacometrics & Systems Pharmacology(2023)10.1002/psp4.12923

N/A

0DataRank · unranked

6 citations

Nusaibah Abdul Rahim, Rajnikant Sharma, Colin G. Cess, Stacey D. Finley, Phillip J. Bergen +4 more

A systems and computational biology perspective on advancing CAR therapy

Seminars in Cancer Biology(2023)10.1016/j.semcancer.2023.05.009

N/A

0DataRank · unranked

7 citations

Stacey D. Finley, Vardges Tserunyan

Information-Theoretic Analysis of a Model of CAR-4-1BB-Mediated NFκB Activation

Bulletin of Mathematical Biology(2023)10.1007/s11538-023-01232-6

N/A

0DataRank · unranked

1 citations

Stacey D. Finley, Vardges Tserunyan

Ensemble-based genome-scale modeling predicts metabolic differences between macrophage subtypes in colorectal cancer

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.09.532000

N/A

0DataRank · unranked

7 citations

Stacey D. Finley, Patrick E. Gelbach

Flux Sampling in Genome-scale Metabolic Modeling of Microbial Communities

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.18.537368

N/A

0DataRank · unranked

4 citations

Stacey D. Finley, Patrick E. Gelbach

Information-theoretic analysis of a model of CAR-4-1BB-mediated NFκB activation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.09.544433

N/A

0DataRank · unranked

1 citations

Stacey D. Finley, Vardges Tserunyan

Flux sampling in genome-scale metabolic modeling of microbial communities

BMC Bioinformatics(2024)10.1186/s12859-024-05655-3

N/A

0DataRank · unranked

25 citations

Handan Çetin, Stacey D. Finley, Patrick E. Gelbach

Age-associated imbalance in immune cell regeneration varies across individuals and arises from a distinct subset of stem cells

Cellular and Molecular Immunology(2024)10.1038/s41423-024-01225-y

N/A

0DataRank · unranked

17 citations

Jiya Eerdeng, Samir Akre, Mary Vergel-Rodriguez, Yeachan Lee, Charles Bramlett +6 more

Integrating Diversity, Equity, and Inclusion into Preclinical, Clinical, and Public Health Mathematical Models

Bulletin of Mathematical Biology(2024)10.1007/s11538-024-01282-4

N/A

0DataRank · unranked

1 citations

Lee Curtin, Stacey D. Finley, Anna Konstorum, Reginald L. McGee, Morgan Craig +1 more

Merging metabolic modeling and imaging for screening therapeutic targets in colorectal cancer

npj Systems Biology and Applications(2025)10.1038/s41540-025-00494-1

N/A

0DataRank · unranked

12 citations

Emma J. Fong, Abigail Coleman, Yukai Huang, Mathias Bigger, Michael E. Doche +7 more

Impact of expression of metabolic genes on patient (pts) outcomes in metastatic colorectal cancer (mCRC): Data from CALGB/SWOG 80405 (Alliance).

Journal of Clinical Oncology(2025)10.1200/jco.2025.43.4_suppl.224

N/A

0DataRank · unranked

0 citations

Joshua Millstein, Yan Yang, Karam Ashouri, Shivani Soni, Sandra Algaze +12 more