🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Vipina K. Keloth

Yale University

ORCID: 0000-0001-6919-1122

Biochemistry, Genetics and Molecular BiologyComputer ScienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.611Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Mining Concepts for a COVID Interface Terminology for Annotation of EHRs

(2020)10.1109/bigdata50022.2020.9377981

Top 32%

0.611DataRank

Top 32%12 citations

Shuxin Zhou, Luke Lindemann, Gai Elhanan, Andrew J. Einstein, James Geller +2 more

Papers

Driven by 15 papers — median percentile 68. Top paper: “Benchmarking large language models for biomedical natural language processing applications and recommendations”.

Benchmarking large language models for biomedical natural language processing applications and recommendations

Nature Communications(2025)10.1038/s41467-025-56989-2

N/A

2.5DataRank · unranked

139 citations

Yan Hu, Xueqing Peng, Qianqian Xie, Qiao Jin, Aidan Gilson +16 more

Systematic design and data-driven evaluation of social determinants of health ontology (SDoHO)

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad096

N/A

0.713DataRank · unranked

25 citations

Fang Li, Xinyue Hu, Vipina K. Keloth, Meng Zhang, Sunyang Fu +9 more

Mining Concepts for a COVID Interface Terminology for Annotation of EHRs

(2020)10.1109/bigdata50022.2020.9377981

Top 32%

0.611DataRank

Top 32%12 citations

Shuxin Zhou, Luke Lindemann, Gai Elhanan, Andrew J. Einstein, James Geller +2 more

Conversational Bots for Psychotherapy: A Study of Generative Transformer Models Using Domain-specific Dialogues

(2022)10.18653/v1/2022.bionlp-1.27

N/A

0DataRank · unranked

45 citations

Salih Selek, Alia Warner, Xu Zuo, Yan Hu, Vipina K. Keloth +4 more

Representing and utilizing clinical textual data for real world studies: An OHDSI approach

Journal of Biomedical Informatics(2023)10.1016/j.jbi.2023.104343

N/A

0DataRank · unranked

15 citations

Juan M. Banda, Michael Gurley, Paul M. Heider, Georgina Kennedy, Hongfang Liu +22 more

A review of auditing techniques for the Unified Medical Language System

Journal of the American Medical Informatics Association(2020)10.1093/jamia/ocaa108

N/A

0DataRank · unranked

16 citations

Zhe He, Duo Wei, Vipina K. Keloth, Jungwei Fan, Luke Lindemann +4 more

Integrating Commercial and Social Determinants of Health: A Unified Ontology for Non-Clinical Determinants of Health

PubMed(2023)10.48550/arxiv.2304.01446

N/A

0DataRank · unranked

2 citations

Vipina K. Keloth, Julia Xu, James Geller, Navya Martin Kollapally

Improving large language models for clinical named entity recognition via prompt engineering

Journal of the American Medical Informatics Association(2024)10.1093/jamia/ocad259

N/A

0DataRank · unranked

289 citations

Qingyu Chen, Jingcheng Du, Xueqing Peng, Vipina K. Keloth, Xu Zuo +7 more

Advancing entity recognition in biomedicine via instruction tuning of large language models

Bioinformatics(2024)10.1093/bioinformatics/btae163

N/A

0DataRank · unranked

95 citations

Yan Hu, Qianqian Xie, Xueqing Peng, Yan Wang, Andrew Zheng +8 more

Detection of Gastrointestinal Bleeding With Large Language Models to Aid Quality Improvement and Appropriate Reimbursement

Gastroenterology(2024)10.1053/j.gastro.2024.09.014

N/A

0DataRank · unranked

17 citations

Vipina K. Keloth, Kisung You, Daniel Kats, Darrick K. Li, Ohm Deshpande +5 more

Ensemble pretrained language models to extract biomedical knowledge from literature

Journal of the American Medical Informatics Association(2024)10.1093/jamia/ocae061

N/A

0DataRank · unranked

19 citations

Qiang Wei, Liang‐Chin Huang, Jianfu Li, Yan Hu, Yao-Shun Chuang +11 more

FedFSA: Hybrid and federated framework for functional status ascertainment across institutions

Journal of Biomedical Informatics(2024)10.1016/j.jbi.2024.104623

N/A

0DataRank · unranked

14 citations

Heling Jia, Maria Vassilaki, Vipina K. Keloth, Yifang Dang, Yujia Zhou +13 more

Benchmarking large language models for biomedical natural language processing applications and recommendations

arXiv (Cornell University)(2023)10.48550/arxiv.2305.16326

N/A

0DataRank · unranked

41 citations

Yan Hu, Xueqing Peng, Xie, Qianqian, Jin, Qiao, Gilson, Aidan +16 more

Outlier concepts auditing methodology for a large family of biomedical ontologies

BMC Medical Informatics and Decision Making(2020)10.1186/s12911-020-01311-x

N/A

0DataRank · unranked

4 citations

Hua Min, Yan Chen, Vipina K. Keloth, James Geller, Yehoshua Perl +2 more

Visual comprehension and orientation into the COVID-19 CIDO ontology

Journal of Biomedical Informatics(2021)10.1016/j.jbi.2021.103861

N/A

0DataRank · unranked

5 citations

Yehoshua Perl, Yongqun He, Christopher Ochs, James Geller, Hao Liu +2 more