Kong Chen

University of Science and Technology of China

Also affiliated with University of Pittsburgh, China National Space Administration, National Institute of Diabetes and Digestive and Kidney Diseases, University of Pittsburgh Medical Center

MedicineImmunology and MicrobiologyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 31 papers. Top paper: “Reduced B cell antigenicity of Omicron lowers host serologic response”.

Reduced B cell antigenicity of Omicron lowers host serologic response

Cell Reports(2022)10.1016/j.celrep.2022.111512

N/A

0.932DataRank · unranked

17 citations

Yufei Xiang, Li Fan, Haim J. Wolfson, Kong Chen, Dina Schneidman‐Duhovny +2 more

Protein arginine N-methyltransferase 4 (PRMT4) contributes to lymphopenia in experimental sepsis

Thorax(2022)10.1136/thoraxjnl-2021-217526

N/A

0.771DataRank · unranked

17 citations

Xiuying Li, Tiao Li, Xiaoyun Li, Toru Nyunoya, Kong Chen +8 more

A resource of high-quality and versatile nanobodies for drug delivery

iScience(2021)10.1016/j.isci.2021.103014

N/A

0.553DataRank · unranked

39 citations

Yufei Xiang, Sandra Vergara, Apeng Chen, Zhengyun Xiao, Ulises Santiago +10 more

Neutrophils and galectin-3 defend mice from lethal bacterial infection and humans from acute respiratory failure

Nature Communications(2024)10.1038/s41467-024-48796-y

N/A

0.457DataRank · unranked

20 citations

Tomasz W. Kamiński, Brent T. Schlegel, William Bain, Sanmei Hu, Akruti Patel +12 more

BREM-SC: A Bayesian Random Effects Mixture Model for Joint Clustering Single Cell Multi-omics Data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.18.911461

N/A

0.269DataRank · unranked

5 citations

Zhe Sun, Yanfu Zhang, Zhongli Xu, Heng Huang, Richard H. Duerr +4 more

Human lung tissue resident memory T cells are re-programmed but not eradicated with systemic glucocorticoids after acute cellular rejection

medRxiv(2021)10.1101/2021.09.27.21263985

N/A

0DataRank · unranked

1 citations

Kaveh Moghbeli, Anna Bondonese, Andrew Craig, Iulia Popescu, Li Fan +14 more

Modulation of tissue resident memory T cells by glucocorticoids after acute cellular rejection in lung transplantation

The Journal of Experimental Medicine(2022)10.1084/jem.20212059

N/A

0DataRank · unranked

47 citations

Kaveh Moghbeli, Anna Bondonese, Andrew Craig, Iulia Popescu, Li Fan +14 more

CD4+ T-Cell Dysfunction in Severe COVID-19 Disease Is Tumor Necrosis Factor-α/Tumor Necrosis Factor Receptor 1–Dependent

American Journal of Respiratory and Critical Care Medicine(2022)10.1164/rccm.202111-2493oc

N/A

0DataRank · unranked

42 citations

Mark E. Snyder, Carlo J. Iasella, Stefanie J. Hannan, Ritchie Koshy, Robin Burke +30 more

Integrative analysis of spatial transcriptome with single-cell transcriptome and single-cell epigenome in mouse lungs after immunization

iScience(2022)10.1016/j.isci.2022.104900

N/A

0DataRank · unranked

21 citations

Xinjun Wang, Li Fan, Fujing Wang, Becky Lin, Jiebiao Wang +4 more

SECANT: a biology-guided semi-supervised method for clustering, classification, and annotation of single-cell multi-omics

PNAS Nexus(2022)10.1093/pnasnexus/pgac165

N/A

0DataRank · unranked

5 citations

Zhongli Xu, Haoran Hu, Xueping Zhou, Yanfu Zhang, Robert Lafyatis +6 more

Reduced antigenicity of Omicron lowers host serologic response

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.15.480546

N/A

0DataRank · unranked

8 citations

Yufei Xiang, Li Fan, Haim J. Wolfson, Kong Chen, Dina Schneidman‐Duhovny +2 more

Single-cell atlas of the human neonatal small intestine affected by necrotizing enterocolitis

PLoS Biology(2023)10.1371/journal.pbio.3002124

N/A

0DataRank · unranked

40 citations

Oluwabunmi Olaloye, Lael Werner, Tatiana Silva, Blake McCourt, Richard W. Pierce +8 more

Single-nucleus chromatin accessibility identifies a critical role for TWIST1 in idiopathic pulmonary fibrosis myofibroblast activity

European Respiratory Journal(2023)10.1183/13993003.00474-2022

N/A

0DataRank · unranked

31 citations

Harinath Bahudhanapati, Jiangning Tan, Tracy Tabib, Daniel I. Sullivan, Mehdi Nouraie +11 more

Phagocytosis is a primary determinant of pulmonary clearance of clinical Klebsiella pneumoniae isolates

Frontiers in Cellular and Infection Microbiology(2023)10.3389/fcimb.2023.1150658

N/A

0DataRank · unranked

17 citations

Hongye Fan, Hernán F. Peñaloza, William Bain, Zeyu Xiong, Naina Kohli +10 more

Impact of enzymatic digestion on single cell suspension yield from peripheral human lung tissue

Cytometry Part A(2023)10.1002/cyto.a.24777

N/A

0DataRank · unranked

15 citations

Andrew Craig, Li Fan, Eleanor Valenzi, William Bain, Robert Lafyatis +4 more

Systems serology in cystic fibrosis: Anti-Pseudomonas IgG1 responses and reduced lung function

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.101210

N/A

0DataRank · unranked

2 citations

Kong Chen, Kejing Song, Joseph M. Pilewski, Bronwyn M. Gunn, Katie R. Poch +5 more

Monocyte production of C1q potentiates CD8 + T cell effector function following respiratory viral infection

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.04.543430

N/A

0DataRank · unranked

0 citations

Olivia B. Parks, Dequan Lou, Li Fan, Jorna Sojati, Manda Jo Ramsey +8 more

Innovative super-resolution in spatial transcriptomics: a transformer model exploiting histology images and spatial gene expression

Briefings in Bioinformatics(2024)10.1093/bib/bbae052

N/A

0DataRank · unranked

42 citations

Zhongli Xu, Xinjun Wang, Shiyue Tao, William A. MacDonald, Kun He +5 more

IFN-λ drives distinct lung immune landscape changes and antiviral responses in human metapneumovirus infection

mBio(2024)10.1128/mbio.00550-24

N/A

0DataRank · unranked

16 citations

Olivia B. Parks, Yu Zhang, Sara Walters, Jie Lan, Taylor Eddens +6 more

Single-cell RNA sequencing in stroke and traumatic brain injury: Current achievements, challenges and future perspectives on transcriptomic profiling

Journal of Cerebral Blood Flow & Metabolism(2024)10.1177/0271678x241305914

N/A

0DataRank · unranked

11 citations

Huaijun Chen, Wenting Zhang, Rehana K. Leak, Dequan Lou, Kong Chen +2 more

Lung Epithelium Releases Growth Differentiation Factor 15 in Response to Pathogen-mediated Injury

American Journal of Respiratory Cell and Molecular Biology(2024)10.1165/rcmb.2023-0429oc

N/A

0DataRank · unranked

6 citations

Harinath Bahudhanapati, Mao Jiang, Mohammadreza Tabary, Rick van der Geest, Nathanial J. Tolman +24 more

Oxidized phospholipid and transcriptomic signatures of THC-related vaping associated lung injury

Scientific Reports(2024)10.1038/s41598-024-79585-8

N/A

0DataRank · unranked

6 citations

Mohammadreza Tabary, William Bain, Tolani F. Olonisakin, Karina C. Lockwood, Zeyu Xiong +20 more

STAT1 Employs Myeloid Cell–Extrinsic Mechanisms to Regulate the Neutrophil Response and Provide Protection against Invasive Klebsiella pneumoniae Lung Infection

ImmunoHorizons(2024)10.4049/immunohorizons.2300104

N/A

0DataRank · unranked

5 citations

Hernán F. Peñaloza, Rick van der Geest, Zeyu Xiong, A.P. Gheware, Mohammadreza Tabary +14 more

Monocyte Production of C1q Potentiates CD8+ T-Cell Function Following Respiratory Viral Infection

American Journal of Respiratory Cell and Molecular Biology(2024)10.1165/rcmb.2024-0004oc

N/A

0DataRank · unranked

6 citations

Olivia B. Parks, Dequan Lou, Li Fan, Jorna Sojati, Manda Jo Ramsey +10 more

Lung Epithelial Regnase-1 Dampens Local Immune Response but Does Not Worsen Susceptibility to Klebsiella pneumoniae

ImmunoHorizons(2024)10.4049/immunohorizons.2300082

N/A

0DataRank · unranked

1 citations

Li Fan, Seamus Jackson, Aidan R. Matunis, Dequan Lou, Kong Chen +2 more

BREM-SC: a bayesian random effects mixture model for joint clustering single cell multi-omics data

Nucleic Acids Research(2020)10.1093/nar/gkaa314

N/A

0DataRank · unranked

103 citations

Zhe Sun, Yanfu Zhang, Zhongli Xu, Hongyi Xin, Heng Huang +5 more

NKG2D blockade impairs tissue-resident memory T cell accumulation and reduces chronic lung allograft dysfunction

JCI Insight(2025)10.1172/jci.insight.184048

N/A

0DataRank · unranked

13 citations

Madeline A. Lipp, Marta Bueno, Andrew Craig, Michelle Rojas, Mohammed Abbas +14 more

Artificial-cell-type aware cell-type classification in CITE-seq

Bioinformatics(2020)10.1093/bioinformatics/btaa467

N/A

0DataRank · unranked

14 citations

Hongyi Xin, Jianzhu Ma, Liza Konnikova, Wei Chen, Jin Gu +2 more

A road map from single-cell transcriptome to patient classification for the immune response to trauma

JCI Insight(2020)10.1172/jci.insight.145108

N/A

0DataRank · unranked

47 citations

Matthew J. Delano, Kong Chen, Jason L. Sperry, Rami A. Namas, Ashley J. Lamparello +11 more

Treg cell-derived osteopontin promotes microglia-mediated white matter repair after ischemic stroke

Immunity(2021)10.1016/j.immuni.2021.04.022

N/A

0DataRank · unranked

430 citations

Zeyu Sun, Wei Su, Fei Xu, Di Xie, Qingxiu Zhang +13 more

Regnase-1 deficiency restrains Klebsiella pneumoniae infection by regulation of a Type I interferon response

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.20.469389

N/A

0DataRank · unranked

2 citations

Becky Lin, Li Fan, Felix E.Y. Aggor, Partha S. Biswas, Kong Chen +2 more