Sofie R. Salama

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

11.8Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Complete genomic and epigenetic maps of human centromeres

Science(2022)10.1126/science.abl4178

Top 4%

5.0DataRank

Top 4%637 citations

Glennis A. Logsdon, Andrey V. Bzikadze, Pragya Sidhwani, Sasha A. Langley, Gina V. Caldas +54 more

Papers

Driven by 29 papers — median percentile 90. Top paper: “Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes”.

Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes

Nature Biotechnology(2020)10.1038/s41587-020-0503-6

N/A

12.8DataRank · unranked

655 citations

Trevor Pesout, Ryan Lorig-Roach, Marina Haukness, Hugh E. Olsen, Colleen M. Bosworth +27 more

Complete genomic and epigenetic maps of human centromeres

Science(2022)10.1126/science.abl4178

Top 4%

5.0DataRank

Top 4%637 citations

Glennis A. Logsdon, Andrey V. Bzikadze, Pragya Sidhwani, Sasha A. Langley, Gina V. Caldas +54 more

Three Periods of Regulatory Innovation During Vertebrate Evolution

Science(2011)10.1126/science.1202702

N/A

4.9DataRank · unranked

143 citations

Sharon L. R. Kardia, Olof Emanuelsson, Alexander Stark, Michele Clamp, Sofie R. Salama +6 more

Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility

Science(2020)10.1126/science.abc6617

Top 6%

3.6DataRank

Top 6%201 citations

R. Alan Harris, Marina Haukness, Ian T. Fiddes, Shwetha C. Murali, Jason D. Fernandes +55 more

A high-quality bonobo genome refines the analysis of hominid evolution

Nature(2021)10.1038/s41586-021-03519-x

Top 10%

2.1DataRank

Top 10%92 citations

Claudia Rita Catacchio, LaDeana Hillier, David Porubsky, Ruiyang Li, Arvis Sulovari +34 more

Complete genomic and epigenetic maps of human centromeres

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.12.452052

Top 22%

0.911DataRank

Top 22%17 citations

Glennis A. Logsdon, Andrey V. Bzikadze, Pragya Sidhwani, Sasha A. Langley, Gina V. Caldas +53 more

Co-option of the lineage-specific LAVA retrotransposon in the gibbon genome

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2006038117

N/A

0.724DataRank · unranked

23 citations

Kimberly A. Nevonen, Brett A. Davis, Pryce Michener, Samantha Ward, Mark Milhaven +9 more

Multimodal evaluation of network activity and optogenetic interventions in human hippocampal slices

Nature Neuroscience(2024)10.1038/s41593-024-01782-5

N/A

0.564DataRank · unranked

42 citations

Jinghui Geng, Kateryna Voitiuk, Matthew A.T. Elliott, David Shin, Ash Robbins +21 more

Picroscope: low-cost system for simultaneous longitudinal biological imaging

Communications Biology(2021)10.1038/s42003-021-02779-7

N/A

0.553DataRank · unranked

39 citations

Pierre V. Baudin, Pattawong Pansodtee, Erik Jung, Kateryna Voitiuk, Yohei Rosen +14 more

A feedback-driven brain organoid platform enables automated maintenance and high-resolution neural activity monitoring

Internet of Things(2025)10.1016/j.iot.2025.101671

N/A

0.406DataRank · unranked

14 citations

Spencer T. Seiler, Mirella Pessoa de Melo, Jinghui Geng, Tjitse van der Molen, Sebastian Hernandez +13 more

Multiscale Cloud-Based Pipeline for Neuronal Electrophysiology Analysis and Visualization

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.14.623530

N/A

0.269DataRank · unranked

5 citations

Kateryna Voitiuk, David F. Parks, Ash Robbins, Alex Spaeth, Jessica Sevetson +14 more

Gamifying cell culture training: The ‘Seru-Otchi’ experience for undergraduates

Heliyon(2024)10.1016/j.heliyon.2024.e30469

N/A

0.208DataRank · unranked

3 citations

Drew Ehrlich, Jess Sevetson, Ryan N. Hoffman, Sofie R. Salama, Sri Kurniawan +2 more

Modulation of neuronal activity in cortical organoids with bioelectronic delivery of ions and neurotransmitters

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.10.544416

N/A

0.208DataRank · unranked

3 citations

Sebastian Hernandez, Cristian O. Hernandez, H. Schweiger, Houpu Li, Kateryna Voitiuk +12 more

Modular automated microfluidic cell culture platform reduces glycolytic stress in cerebral cortex organoids

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.13.499938

N/A

0.208DataRank · unranked

3 citations

Gary L. Mantalas, John Selberg, Sergio Cordero, Sebastián Torres, Pierre V. Baudin +10 more

Consistently processed RNA sequencing data from 50 sources enriched for pediatric data

Scientific Data(2025)10.1038/s41597-025-05376-z

Top 70%

0.165DataRank

Top 70%2 citations

Katrina Learned, Ellen Kephart, A. Geoffrey Lyle, Anouk van den Bout, Molly McCabe +16 more

Single molecule nanopore counting assay targeting small extracellular vesicle cargo for non-invasive monitoring of cerebral organoid development and health

Scientific Reports(2025)10.1038/s41598-025-31284-8

N/A

0.165DataRank · unranked

2 citations

R. Xu, Mohammad Julker Neyen Sampad, Ryan N. Hoffman, Spencer T. Seiler, Quinton Brail +11 more

Development of a Low-Cost System for Simultaneous Longitudinal Biological Imaging

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.17.443454

N/A

0.104DataRank · unranked

1 citations

Pierre V. Baudin, Pattawong Pansodtee, Erik Jung, Kateryna Voitiuk, Yohei Rosen +14 more

Internet of Things Architecture for Cellular Biology

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.29.453595

N/A

0DataRank · unranked

3 citations

Kateryna Voitiuk, Jinghui Geng, Matthew A.T. Elliott, Matthew G. Keefe, Erik Jung +18 more

Isoform-specific translational control is evolutionarily conserved in primates

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.21.537863

N/A

0DataRank · unranked

2 citations

Julia Philipp, Zach Neeb, Richard C. Thomas, Solomon Katzman, Sofie R. Salama +3 more

Light-weight Electrophysiology Hardware and Software Platform for Cloud-Based Neural Recording Experiments

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.18.444685

N/A

0DataRank · unranked

4 citations

Jinghui Geng, Matthew G. Keefe, David F. Parks, Sebastian E. Sanso, Nico Hawthorne +7 more

Modulation of neuronal activity in cortical organoids with bioelectronic delivery of ions and neurotransmitters

Cell Reports Methods(2024)10.1016/j.crmeth.2023.100686

N/A

0DataRank · unranked

21 citations

Sebastian Hernandez, Cristian O. Hernandez, H. Schweiger, Houpu Li, Kateryna Voitiuk +13 more

Light-weight electrophysiology hardware and software platform for cloud-based neural recording experiments

Journal of Neural Engineering(2021)10.1088/1741-2552/ac310a

N/A

0DataRank · unranked

16 citations

Jinghui Geng, Matthew G. Keefe, David F. Parks, Sebastian E. Sanso, Nico Hawthorne +9 more

A feedback-driven brain organoid platform enables automated maintenance and high-resolution neural activity monitoring

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.15.585237

N/A

0DataRank · unranked

7 citations

Spencer T. Seiler, Mirella Pessoa de Melo, Jinghui Geng, Tjitse van der Molen, Sebastian Hernandez +13 more

A Functional Precision Medicine Pipeline Combines Comparative Transcriptomics and Tumor Organoid Modeling to Identify Bespoke Treatment Strategies for Glioblastoma

Cells(2021)10.3390/cells10123400

N/A

0DataRank · unranked

29 citations

A. Geoffrey Lyle, Annick De Loose, Leena Maddukuri, Katrina Learned, Holly C. Beale +15 more

Comprehensive Molecular Characterization of Pheochromocytoma and Paraganglioma

UNC Libraries(2020)10.17615/np0d-4636

N/A

0DataRank · unranked

0 citations

Manaswi Gupta, Anouk van Berkel, Jessica Marquard, Tobias Else, Ian T. Fiddes +95 more

ProTECT—Prediction of T-Cell Epitopes for Cancer Therapy

Frontiers in Immunology(2020)10.3389/fimmu.2020.483296

N/A

0DataRank · unranked

18 citations

Ada A. Madejska, Jacob Pfeil, Benedict Paten, Sofie R. Salama, David Haussler +1 more

Self-Organizing Neural Networks in Organoids Reveal Principles of Forebrain Circuit Assembly

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.01.651773

N/A

0DataRank · unranked

7 citations

H. Schweiger, Isabel Cline, Gregory A. Kaurala, Ash Robbins, David García Solís +14 more

IoT cloud laboratory: Internet of Things architecture for cellular biology

Internet of Things(2022)10.1016/j.iot.2022.100618

N/A

0DataRank · unranked

34 citations

Kateryna Voitiuk, Jinghui Geng, Matthew A.T. Elliott, Matthew G. Keefe, Erik Jung +18 more

Modular automated microfluidic cell culture platform reduces glycolytic stress in cerebral cortex organoids

Scientific Reports(2022)10.1038/s41598-022-20096-9

N/A

0DataRank · unranked

64 citations

Gary L. Mantalas, John Selberg, Sergio Cordero, Sebastián Torres, Pierre V. Baudin +10 more

Sofie R. Salama

Indexed papers

Top data-sharing exemplar

Papers