Caleb N. Ellington

Also affiliated with Carnegie Mellon University

Computer ScienceBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 8 papers. Top paper: “Learning to Estimate Sample-specific Transcriptional Networks for 7000 Tumors”.

Learning to Estimate Sample-specific Transcriptional Networks for 7000 Tumors

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.01.569658

N/A

0.308DataRank · unranked

6 citations

Benjamin J. Lengerich, Thomas B.K. Watkins, Jiekun Yang, Abhinav Adduri, Sazan Mahbub +4 more

Contextualized: Heterogeneous Modeling Toolbox

Journal of Open Source Software(2024)10.21105/joss.06469

N/A

0.241DataRank · unranked

4 citations

Benjamin J. Lengerich, Wesley Lo, Aaron Alvarez, Andrea Rubbi, Sharon L. R. Kardia +4 more

Contextualized Machine Learning

arXiv (Cornell University)(2023)10.48550/arxiv.2310.11340

N/A

0.223DataRank · unranked

3 citations

Caleb N. Ellington, Andrea Rubbi, Sharon L. R. Kardia, Eric P. Xing, Benjamin J. Lengerich

NOTMAD: Estimating Bayesian Networks with Sample-Specific Structures and Parameters

arXiv (Cornell University)(2021)10.48550/arxiv.2111.01104

N/A

0.104DataRank · unranked

1 citations

Caleb N. Ellington, Bryon Aragam, Eric P. Xing, Sharon L. R. Kardia, Benjamin J. Lengerich

Interpretable adenylation domain specificity prediction using protein language models

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.13.632878

N/A

0DataRank · unranked

0 citations

Andrew T. McNutt, Caleb N. Ellington, Krish Suraparaju, Nan Fang, Donghui Yan +8 more

Learning to estimate sample-specific transcriptional networks for 7,000 tumors

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2411930122

N/A

0DataRank · unranked

0 citations

Benjamin J. Lengerich, Thomas B. K. Watkins, Jiekun Yang, Abhinav K Adduri, Sazan Mahbub +6 more

Automated interpretable discovery of heterogeneous treatment effectiveness: A COVID-19 case study

Journal of Biomedical Informatics(2022)10.1016/j.jbi.2022.104086

N/A

0DataRank · unranked

6 citations

Mark E. Nunnally, Yindalon Aphinyanaphongs, Caleb N. Ellington, Rich Caruana, Benjamin J. Lengerich

AttentionPert: accurately modeling multiplexed genetic perturbations with multi-scale effects

Bioinformatics(2024)10.1093/bioinformatics/btae244

N/A

0DataRank · unranked

14 citations

Caleb N. Ellington, Shentong Mo, Le Song, Eric P. Xing, Ding Bai