Xiaobo Zhou

The University of Texas Health Science Center

Also affiliated with The University of Texas Health Science Center at Houston

Biochemistry, Genetics and Molecular BiologyEngineering

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

8.4Author DataRank

Indexed papers

11in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 11 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

SPASCER: spatial transcriptomics annotation at single-cell resolution

Nucleic Acids Research(2022)10.1093/nar/gkac889

Top 11%

2.0DataRank

Top 11%53 citations

Yangyang Luo, Huifen Lu, Tiangang Wang, Yuzhou Feng, Weiling Zhao +3 more

Papers

Driven by 49 papers — median percentile 72. Top paper: “SPASCER: spatial transcriptomics annotation at single-cell resolution”.

SPASCER: spatial transcriptomics annotation at single-cell resolution

Nucleic Acids Research(2022)10.1093/nar/gkac889

Top 11%

2.0DataRank

Top 11%53 citations

Yangyang Luo, Huifen Lu, Tiangang Wang, Yuzhou Feng, Weiling Zhao +3 more

AgeAnno: a knowledgebase of single-cell annotation of aging in human

Nucleic Acids Research(2022)10.1093/nar/gkac847

Top 14%

1.5DataRank

Top 14%41 citations

Hoaran Gong, Jingjing Guan, Lingxiao Zhang, Changbao Hu, Weiling Zhao +5 more

FusionGDB 2.0: fusion gene annotation updates aided by deep learning

Nucleic Acids Research(2021)10.1093/nar/gkab1056

Top 16%

1.3DataRank

Top 16%58 citations

Hua Tan, Jiajia Liu, Haeseung Lee, Hyesoo Jung, Himansu Kumar +2 more

DRMref: comprehensive reference map of drug resistance mechanisms in human cancer

Nucleic Acids Research(2023)10.1093/nar/gkad1087

Top 24%

0.846DataRank

Top 24%33 citations

Jiahao Yi, Tina Li, Jianguo Wen, Kexin Huang, Jiajia Liu +5 more

CRISPRoffT: comprehensive database of CRISPR/Cas off-targets

Nucleic Acids Research(2024)10.1093/nar/gkae1025

Top 25%

0.819DataRank

Top 25%29 citations

Xiaona Liu, Aoqi Wang, Jianguo Wen, Pora Kim, Qianqian Song +2 more

COV2Var, a function annotation database of SARS-CoV-2 genetic variation

Nucleic Acids Research(2023)10.1093/nar/gkad958

Top 28%

0.712DataRank

Top 28%21 citations

Jiahao Yi, Lin Yang, Yanfei Wang, Jianguo Wen, Weiling Zhao +3 more

Prediction of the trajectories of depressive symptoms among children in the adolescent brain cognitive development (ABCD) study using machine learning approach

Journal of Affective Disorders(2022)10.1016/j.jad.2022.05.020

N/A

0.529DataRank · unranked

33 citations

Kai Chen, Li Peng, Jiawei Luo, Jingwen Jiang, Yang Chen +4 more

ADeditome provides the genomic landscape of A-to-I RNA editing in Alzheimer’s disease

Briefings in Bioinformatics(2020)10.1093/bib/bbaa384

N/A

0.510DataRank · unranked

29 citations

Mengyuan Yang, Pora Kim, Xiaobo Zhou, Sijia Wu

FusionNeoAntigen: a resource of fusion gene-specific neoantigens

Nucleic Acids Research(2023)10.1093/nar/gkad922

N/A

0.434DataRank · unranked

17 citations

Ruihan Luo, Jianguo Wen, Chengyuan Yang, Xiaobo Zhou, Pora Kim +1 more

scProAtlas: an atlas of multiplexed single-cell spatial proteomics imaging in human tissues

Nucleic Acids Research(2024)10.1093/nar/gkae990

N/A

0.396DataRank · unranked

13 citations

Xuanmin Chen, Yujuan Han, Jiahao Yi, X. Liu, Pora Kim +4 more

AgeAnnoMO: a knowledgebase of multi-omics annotation for animal aging

Nucleic Acids Research(2023)10.1093/nar/gkad884

Top 47%

0.386DataRank

Top 47%8 citations

X. Liu, Zhaocan Zhang, Tiangang Wang, Haixia Xu, Qingxuan Li +5 more

Identification of a distal enhancer regulating hedgehog interacting protein gene in human lung epithelial cells

EBioMedicine(2024)10.1016/j.ebiom.2024.105026

N/A

0.360DataRank · unranked

10 citations

Li Zhang, Yuzhen Yu, Lu Gong, Shiyue Tao, Rhiannon B. Werder +17 more

The landscape of malignant transition: Unraveling cancer cell-of-origin and heterogeneous tissue microenvironment

Cancer Letters(2025)10.1016/j.canlet.2025.217591

N/A

0.345DataRank · unranked

9 citations

Jiajia Liu, Tiangang Wang, Weiling Zhao, Yanfei Wang, Jianguo Wen +4 more

StemDriver: a knowledgebase of gene functions for hematopoietic stem cell fate determination

Nucleic Acids Research(2023)10.1093/nar/gkad1063

Top 52%

0.331DataRank

Top 52%4 citations

Jingjing Guo, Jianguo Wen, Weiling Zhao, Kexin Huang, Yang Liu +8 more

A Cell Cycle‐Aware Network for Data Integration and Label Transferring of Single‐Cell RNA‐Seq and ATAC‐Seq

Advanced Science(2024)10.1002/advs.202401815

N/A

0.312DataRank · unranked

7 citations

Jian Ma, Jianguo Wen, Xiaobo Zhou, Jiajia Liu

IMPA1-derived inositol maintains stemness in castration-resistant prostate cancer via IMPDH2 activation

The Journal of Experimental Medicine(2024)10.1084/jem.20231832

N/A

0.304DataRank · unranked

6 citations

Guihua Wang, Chien‐Feng Li, Xian Zhang, Zhen Cai, Tingjin Chen +16 more

SexAnnoDB, a knowledgebase of sex-specific regulations from multi-omics data of human cancers

Biology of Sex Differences(2024)10.1186/s13293-024-00638-8

Top 56%

0.286DataRank

Top 56%5 citations

Yuzhou Feng, Jiajia Liu, Hong Wang, Sijia Wu, Weiling Zhao +3 more

Spatial2GWAS: a database for linking spatial transcriptomic regions with GWAS traits

Nucleic Acids Research(2025)10.1093/nar/gkaf1047

Top 66%

0.181DataRank

Top 66%2 citations

Aoqi Wang, Huan Yu, Pora Kim, Xiaobo Zhou, Xi Hu

Redox integration of signaling and metabolism in a head and neck cancer model of radiation resistance using COSMRO

Frontiers in Oncology(2023)10.3389/fonc.2022.946320

N/A

0DataRank · unranked

6 citations

Jade Moore, Nelmi O. Devarie‐Baez, Joshua E. Lewis, Hanzhi Wu, Kirtikar Shukla +11 more

Revealing chronic disease progression patterns using Gaussian process for stage inference

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad230

N/A

0DataRank · unranked

2 citations

Weiling Zhao, Angela Ross, Lei You, Hongyu Wang, Xiaobo Zhou +1 more

Systematic investigation of the homology sequences around the human fusion gene breakpoints in pan-cancer – bioinformatics study for a potential link to MMEJ

Briefings in Bioinformatics(2023)10.1093/bib/bbad314

N/A

0DataRank · unranked

1 citations

Himansu Kumar, Chengyuan Yang, Ruihan Luo, Jiajia Liu, Xiaobo Zhou +1 more

COVIDanno, COVID-19 annotation in human

Frontiers in Microbiology(2023)10.3389/fmicb.2023.1129103

N/A

0DataRank · unranked

0 citations

Mengyuan Yang, Zhiwei Fan, Weiling Zhao, Pora Kim, Xiaobo Zhou +1 more

Cross-Image siamese graph convolutional network for Fine-Grained image retrieval in diabetic retinopathy

Biomedical Signal Processing and Control(2024)10.1016/j.bspc.2024.106045

N/A

0DataRank · unranked

13 citations

Weiling Zhao, Xiaobo Zhou, Fang Fiona Chen

Radiogenomics-Based Risk Prediction of Glioblastoma Multiforme with Clinical Relevance

Genes(2024)10.3390/genes15060718

N/A

0DataRank · unranked

7 citations

Hua Tan, Xiaona Liu, Weiling Zhao, Michael D. Chan, Pora Kim +2 more

A Cell Cycle-aware Network for Data Integration and Label Transferring of Single-cell RNA-seq and ATAC-seq

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.31.578213

N/A

0DataRank · unranked

0 citations

Jian Ma, Jianguo Wen, Xiaobo Zhou, Jiajia Liu

Study of prognostic splicing factors in cancer using machine learning approaches

Human Molecular Genetics(2024)10.1093/hmg/ddae047

N/A

0DataRank · unranked

0 citations

Jiajia Liu, Pora Kim, Xiaobo Zhou, Mengyuan Yang

SeRL: Style-embedding representation learning for unsupervised CT images synthesis from unpaired MR images

Biomedical Signal Processing and Control(2024)10.1016/j.bspc.2024.106280

N/A

0DataRank · unranked

0 citations

Hongyu Wang, Eduardo J. Matta, Venkateswar R. Surabhi, Xiaobo Zhou, Lei You

Chromatin Landscapes of Human Lung Cells Predict Potentially Functional Chronic Obstructive Pulmonary Disease Genome-Wide Association Study Variants

UNC Libraries(2024)10.17615/26an-bn95

N/A

0DataRank · unranked

0 citations

Jia Liu, Fengjing Guo, Fei Du, Myung‐Haing Cho, Edward Silverman +4 more

Integration of Genetic and Imaging Data for Alzheimer's Disease Diagnosis and Interpretation

Advanced Science(2025)10.1002/advs.202507629

N/A

0DataRank · unranked

3 citations

Qing Wang, Minghao Zhou, Jialu Liang, Lei You, Breton M. Asken +3 more

KnockRBP: an integrated multi-omics database of functional perturbation profiles for RNA-binding proteins

Nucleic Acids Research(2025)10.1093/nar/gkaf1059

Top 100%

0DataRank

Top 100%0 citations

Jiawei Li, Jiajia Liu, Xin Lü, Xiaobo Zhou, Yungang Xu +1 more

scIGANs: single-cell RNA-seq imputation using generative adversarial networks

Nucleic Acids Research(2020)10.1093/nar/gkaa506

N/A

0DataRank · unranked

199 citations

Zhigang Zhang, Lei You, Jiajia Liu, Zhiwei Fan, Xiaobo Zhou +1 more

CauReL: Dynamic Counterfactual Learning for Precision Drug Repurposing in Alzheimer's Disease

Research Square(2025)10.21203/rs.3.rs-8206648/v1

N/A

0DataRank · unranked

0 citations

Minghao Zhou, Zijia Tang, Chenxi Xiong, Breton M. Asken, Baijian Yang +4 more

CaSpER identifies and visualizes CNV events by integrative analysis of single-cell or bulk RNA-sequencing data

Nature Communications(2020)10.1038/s41467-019-13779-x

N/A

0DataRank · unranked

177 citations

Arif Harmanci, Xiaobo Zhou, Akdes Serin Harmancı

Causal Discovery in Radiographic Markers of Knee Osteoarthritis and Prediction for Knee Osteoarthritis Severity With Attention–Long Short-Term Memory

Frontiers in Public Health(2020)10.3389/fpubh.2020.604654

N/A

0DataRank · unranked

21 citations

Lei You, Jacqueline Chyr, Lan Lan, Weiling Zhao, Yujia Zhou +4 more

Development of PLGA‐PEG‐COOH and Gelatin‐Based Microparticles Dual Delivery System and E‐Beam Sterilization Effects for Controlled Release of BMP‐2 and IGF‐1

Particle & Particle Systems Characterization(2020)10.1002/ppsc.202000180

N/A

0DataRank · unranked

19 citations

Seyedsina Moeinzadeh, Sung Woo Kim, Young‐Bum Park, Elaine Lui, Hua Tan +4 more

FGviewer: an online visualization tool for functional features of human fusion genes

Nucleic Acids Research(2020)10.1093/nar/gkaa364

N/A

0DataRank · unranked

14 citations

Ke Yiya, Xiaobo Zhou, Pora Kim

A novel bioinformatics approach to reveal the role of circadian oscillations in AD development

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.16.207357

N/A

0DataRank · unranked

0 citations

Dazhi Shang, Pora Kim, Mengyuan Yang, Sijia Wu, Weiling Zhao +6 more

Machine Intelligence in Single-Cell Data Analysis: Advances and New Challenges

Frontiers in Genetics(2021)10.3389/fgene.2021.655536

N/A

0DataRank · unranked

99 citations

Zhiwei Fan, Weiling Zhao, Xiaobo Zhou, Jiajia Liu

CCPE: cell cycle pseudotime estimation for single cell RNA-seq data

Nucleic Acids Research(2021)10.1093/nar/gkab1236

N/A

0DataRank · unranked

26 citations

Mengyuan Yang, Weiling Zhao, Xiaobo Zhou, Jiajia Liu

FusionAI: Predicting fusion breakpoint from DNA sequence with deep learning

iScience(2021)10.1016/j.isci.2021.103164

N/A

0DataRank · unranked

16 citations

Hua Tan, Jiajia Liu, Mengyuan Yang, Xiaobo Zhou, Pora Kim

PredTAD: A machine learning framework that models 3D chromatin organization alterations leading to oncogene dysregulation in breast cancer cell lines

Computational and Structural Biotechnology Journal(2021)10.1016/j.csbj.2021.05.013

N/A

0DataRank · unranked

6 citations

Zhigang Zhang, Xi Chen, Xiaobo Zhou, Jacqueline Chyr

Multi-scale modeling for systematically understanding the key roles of microglia in AD development

Computers in Biology and Medicine(2021)10.1016/j.compbiomed.2021.104374

N/A

0DataRank · unranked

10 citations

Changan Liu, Weiling Zhao, Claudio Soto, Xiaobo Zhou, Zhiwei Ji

scRegulocity: Detection of local RNA velocity patterns in embeddings of single cell RNA-Seq data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.01.446674

N/A

0DataRank · unranked

5 citations

Arif Harmanci, Xiaobo Zhou, Benjamin Deneen, Ganesh Rao, Tiemo J. Klisch +2 more

CCPE: Cell Cycle Pseudotime Estimation for Single Cell RNA-seq Data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.13.448263

N/A

0DataRank · unranked

2 citations

Mengyuan Yang, Weiling Zhao, Xiaobo Zhou, Jiajia Liu

Corrections to “A Multiscale Agent-Based Model of Ductal Carcinoma in Situ” [May 20 1450-1461]

IEEE Transactions on Biomedical Engineering(2021)10.1109/tbme.2020.3044508

N/A

0DataRank · unranked

0 citations

David Fuentes, Bülent Özpolat, George A. Calin, Xiaobo Zhou, John Lowengrub +3 more

DOTA: Deep Learning Optimal Transport Approach to Advance Drug Repositioning for Alzheimer’s Disease

Biomolecules(2022)10.3390/biom12020196

N/A

0DataRank · unranked

23 citations

Haoran Gong, Xiaobo Zhou, Jacqueline Chyr

FusionAI, a DNA-sequence-based deep learning protocol reduces the false positives of human fusion gene prediction

STAR Protocols(2022)10.1016/j.xpro.2022.101185

N/A

0DataRank · unranked

5 citations

Hua Tan, Jiajia Liu, Himansu Kumar, Xiaobo Zhou, Pora Kim

Integrated mRNA sequence optimization using deep learning

Briefings in Bioinformatics(2023)10.1093/bib/bbad001

N/A

0DataRank · unranked

46 citations

Jianguo Wen, Ruihan Luo, Yuzhou Feng, Jingjing Guo, Hongguang Fu +2 more

Genetic control of RNA editing in neurodegenerative disease

Briefings in Bioinformatics(2023)10.1093/bib/bbad007

N/A

0DataRank · unranked

9 citations

Qiuping Xue, Mengyuan Yang, Yanfei Wang, Pora Kim, Xiaobo Zhou +2 more

Xiaobo Zhou

Indexed papers

Top data-sharing exemplar

Papers