Erin McCaffrey

National Institute of Allergy and Infectious Diseases

Also affiliated with Stanford University

Biochemistry, Genetics and Molecular BiologyMedicineSocial SciencesArts and Humanities

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 21 papers. Top paper: “Transition to invasive breast cancer is associated with progressive changes in the structure and composition of tumor stroma”.

Transition to invasive breast cancer is associated with progressive changes in the structure and composition of tumor stroma

Cell(2022)10.1016/j.cell.2021.12.023

N/A

7.6DataRank · unranked

389 citations

David R. Glass, Inna Averbukh, Candace C. Liu, Alex Baranski, Adam Kagel +21 more

The immunoregulatory landscape of human tuberculosis granulomas

Nature Immunology(2022)10.1038/s41590-021-01121-x

N/A

5.4DataRank · unranked

313 citations

Michele Donato, Leeat Keren, Zhenghao Chen, Alea Delmastro, Megan B. Fitzpatrick +23 more

Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering

Nature Communications(2023)10.1038/s41467-023-40068-5

N/A

0.681DataRank · unranked

93 citations

Noah F. Greenwald, Alex Kong, Erin McCaffrey, Ke Xuan Leow, Dunja Mrdjen +5 more

Combined protein and nucleic acid imaging reveals virus-dependent B cell and macrophage immunosuppression of tissue microenvironments

Immunity(2022)10.1016/j.immuni.2022.03.020

N/A

0.681DataRank · unranked

93 citations

Chi Ngai Chan, Xavier Rovira‐Clavé, Han Chen, Yunhao Bai, Bokai Zhu +27 more

Loss-of-function mutations in Dnmt3a and Tet2 lead to accelerated atherosclerosis and concordant macrophage phenotypes

Nature Cardiovascular Research(2023)10.1038/s44161-023-00326-7

N/A

0.628DataRank · unranked

65 citations

Jayakrishnan Gopakumar, Alexander J. Silver, Daniel Nachun, Herra Ahmad, Marie McConkey +22 more

Spatial epitope barcoding reveals clonal tumor patch behaviors

Cancer Cell(2022)10.1016/j.ccell.2022.09.014

N/A

0.553DataRank · unranked

39 citations

Alexandros P. Drainas, Sizun Jiang, Yunhao Bai, Maya Baron, Bokai Zhu +15 more

Single-cell spatial proteomic imaging for human neuropathology

Acta Neuropathologica Communications(2022)10.1186/s40478-022-01465-x

N/A

0.542DataRank · unranked

36 citations

Bryan J. Cannon, Dmitry Tebaykin, Marc Bossé, Alex Baranski, John Paul Oliveria +16 more

Rhesus Macaque CODEX Multiplexed Immunohistochemistry Panel for Studying Immune Responses During Ebola Infection

Frontiers in Immunology(2021)10.3389/fimmu.2021.729845

N/A

0.396DataRank · unranked

13 citations

Nilanjan Mukherjee, Richard S. Bennett, Han Chen, James Logue, Bonnie Dighero-Kemp +19 more

Single-cell Spatial Proteomic Imaging for Human Neuropathology

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.02.482730

N/A

0.312DataRank · unranked

7 citations

Bryan J. Cannon, Dmitry Tebaykin, Marc Bossé, Alex Baranski, John Paul Oliveria +14 more

Author Correction: The immunoregulatory landscape of human tuberculosis granulomas

Nature Immunology(2022)10.1038/s41590-022-01178-2

N/A

0.292DataRank · unranked

6 citations

Michele Donato, Leeat Keren, Zhenghao Chen, Alea Delmastro, Megan B. Fitzpatrick +23 more

Single-cell metabolic profiling of human cytotoxic T cells

Nature Biotechnology(2020)10.1038/s41587-020-0651-8

N/A

0DataRank · unranked

327 citations

Dunja Mrdjen, Erin McCaffrey, David R. Glass, Noah F. Greenwald, Anusha Bharadwaj +10 more

Immunoregulatory role of IFNγ in granulomas of Mycobacterium tuberculosis-infected rhesus macaques 3823

The Journal of Immunology(2025)10.1093/jimmun/vkaf283.1579

N/A

0DataRank · unranked

0 citations

Sivaranjani Namasivayam, Keith D. Kauffman, Eduardo R. Fukutani, Artur T. L. Queiroz, Erin McCaffrey +7 more

Multiplexed Single-cell Metabolic Profiles Organize the Spectrum of Cytotoxic Human T Cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.17.909796

N/A

0DataRank · unranked

8 citations

Dunja Mrdjen, Erin McCaffrey, David R. Glass, Noah F. Greenwald, Anusha Bharadwaj +6 more

Multiplexed imaging reveals an IFN-γ-driven inflammatory state in nivolumab-associated gastritis

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100419

N/A

0DataRank · unranked

18 citations

Candace C. Liu, Erin McCaffrey, Rashmi Kumar, Theodore S. Nowicki, David W. Dawson +6 more

Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.16.504171

N/A

0DataRank · unranked

19 citations

Noah F. Greenwald, Alex Kong, Erin McCaffrey, Ke Xuan Leow, Dunja Mrdjen +5 more

Single-Cell Imaging Maps Inflammatory Cell Subsets to Pulmonary Arterial Hypertension Vasculopathy

American Journal of Respiratory and Critical Care Medicine(2023)10.1164/rccm.202209-1761oc

N/A

0DataRank · unranked

50 citations

Aiqin Cao, Erin McCaffrey, Toshie Saito, Noah F. Greenwald, Mark R. Nicolls +6 more

Spatial proteomics reveals human microglial states shaped by anatomy and neuropathology

Research Square(2023)10.21203/rs.3.rs-2987263/v1

N/A

0DataRank · unranked

19 citations

Meelad Amouzgar, Bryan J. Cannon, Candace Liu, Angie Spence, Erin McCaffrey +19 more

Spatial Patterning Analysis of Cellular Ensembles (SPACE) discovers complex spatial organization at the cell and tissue levels

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.08.570837

N/A

0DataRank · unranked

2 citations

Erin McCaffrey, Vivek Sreejithkumar, Andrea J. Radtke, Hiroshi Ichise, Armando Arroyo-Mejías +6 more

Multi-omic landscape of human gliomas from diagnosis to treatment and recurrence

Cancer Cell(2025)10.1016/j.ccell.2025.11.006

N/A

0DataRank · unranked

19 citations

Benjamin Oberlton, Mikaela Ribi, Ke Xuan Leow, Jolene S. Ranek, Inna Averbukh +35 more

Spatial Patterning Analysis of Cellular Ensembles (SPACE) finds complex spatial organization at the cell and tissue levels

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2412146122

N/A

0DataRank · unranked

8 citations

Erin McCaffrey, Vivek Sreejithkumar, Andrea J. Radtke, Hiroshi Ichise, Armando Arroyo-Mejías +6 more

CSF1-receptor signaling plays a vital role in immune control of Mycobacterium tuberculosis infection in rhesus macaques 3540

The Journal of Immunology(2025)10.1093/jimmun/vkaf283.1331

N/A

0DataRank · unranked

0 citations

Christine E Nelson, Shunsuke Sakai, Kevin C. Osum, Jay Buchanan, Taylor Newbolt +5 more