Karen N. Allen

Materials ScienceBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 21 papers. Top paper: “Structural Analysis of Binding Determinants of Salmonella typhimurium Trehalose-6-phosphate Phosphatase Using Ground-State Complexes”.

Structural Analysis of Binding Determinants of Salmonella typhimurium Trehalose-6-phosphate Phosphatase Using Ground-State Complexes

Biochemistry(2020)10.1021/acs.biochem.0c00317

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0DataRank · unranked

8 citations

Katherine H. O’Toole, Chunliang Liu, Patrick S. Mariano, Debra Dunaway‐Mariano, Karen N. Allen +1 more

Bioinformatic Analysis of the Flavin-Dependent Amine Oxidase Superfamily: Adaptations for Substrate Specificity and Catalytic Diversity

Journal of Molecular Biology(2020)10.1016/j.jmb.2020.03.007

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42 citations

Karen N. Allen, Margarita A. Tararina

Glycoconjugate pathway connections revealed by sequence similarity network analysis of the monotopic phosphoglycosyl transferases

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2018289118

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30 citations

Barbara Imperiali, Karen N. Allen, Katherine H. O’Toole

The Birth of Genomic Enzymology: Discovery of the Mechanistically Diverse Enolase Superfamily

Biochemistry(2021)10.1021/acs.biochem.1c00494

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9 citations

Christian P. Whitman, Karen N. Allen

Use of Crystallography and Molecular Modeling for the Inhibition of the Botulinum Neurotoxin A Protease

ChemRxiv(2021)10.26434/chemrxiv.14743893

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0DataRank · unranked

0 citations

Alexander L. Nielsen, Lucy Lin, Antonio J. Campedelli, N.R. Silvaggi, Jason Chen +4 more

Use of Crystallography and Molecular Modeling for the Inhibition of the Botulinum Neurotoxin A Protease

ChemRxiv(2021)10.26434/chemrxiv.14743893.v1

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0DataRank · unranked

0 citations

Alexander L. Nielsen, Lucy Lin, Antonio J. Campedelli, N.R. Silvaggi, Jason Chen +4 more

Structure-Guided Insight into the Specificity and Mechanism of a Parasitic Nucleoside Hydrolase

Biochemistry(2022)10.1021/acs.biochem.2c00361

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3 citations

Mattias M. Nyitray, Nicholas Reynarowych, Edina Saljanin, Annie Laurie Benzie, Alan R. Schoenfeld +3 more

Protein-metabolite interactomics of carbohydrate metabolism reveal regulation of lactate dehydrogenase

Science(2023)10.1126/science.abm3452

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0DataRank · unranked

157 citations

Ahmad A. Cluntun, Heidi Schubert, Sean R. Hackett, Jordan A. Berg, Paul G. Leonard +41 more

A conserved core region of the scaffold NEMO is essential for signal-induced conformational change and liquid-liquid phase separation

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.105396

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14 citations

Anthony DeMaria, Judy Wong, Wei Wang, Jack J. Jordanides, Adrian Whitty +3 more

Expanding the viewpoint: Leveraging sequence information in enzymology

Current Opinion in Chemical Biology(2023)10.1016/j.cbpa.2022.102246

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13 citations

Karen N. Allen, Hayley Knox

Synergistic computational and experimental studies of a phosphoglycosyl transferase membrane/ligand ensemble

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.105194

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13 citations

Nemanja Vuksanovic, Leah Ray, Hannah M. Bernstein, Karen N. Allen, Barbara Imperiali +2 more

Co‐conserved sequence motifs are predictive of substrate specificity in a family of monotopic phosphoglycosyl transferases

Protein Science(2023)10.1002/pro.4646

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13 citations

Greg J. Dodge, Karen N. Allen, Barbara Imperiali, Alyssa J. Anderson

Specificity determinants revealed by the structure of glycosyltransferase Campylobacter concisusPglA

Protein Science(2023)10.1002/pro.4848

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5 citations

Jozlyn R. Clasman, Barbara Imperiali, Karen N. Allen, Nemanja Vuksanovic

Synergistic computational and experimental studies of a phosphoglycosyl transferase membrane/ligand ensemble

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.07.539694

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5 citations

Nemanja Vuksanovic, Leah Ray, Hannah M. Bernstein, Karen N. Allen, Barbara Imperiali +2 more

A Conserved Core Region of the Scaffold NEMO is Essential for Signal-induced Conformational Change and Liquid-liquid Phase Separation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.25.542299

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2 citations

Anthony M. DeMaria, Judy Wong, Jack J. Jordanides, Adrian Whitty, Karen N. Allen +2 more

Proteome-wide bioinformatic annotation and functional validation of the monotopic phosphoglycosyl transferase superfamily

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2417572121

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4 citations

Greg J. Dodge, Roxanne P. Siuda, Hugh Higinbotham, Christine A. Arbour, Soumi Ghosh +3 more

Proteome-Wide Bioinformatic Annotation and Functional Validation of the Monotopic Phosphoglycosyl Transferase Superfamily

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.10.602977

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2 citations

Greg J. Dodge, Roxanne P. Siuda, Hugh Higinbotham, Christine A. Arbour, Soumi Ghosh +3 more

Conformational changes in ketohexokinase are conserved across isozymes and species

Acta Crystallographica Section F Structural Biology Communications(2025)10.1107/s2053230x25008428

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1 citations

Karen N. Allen, Dean R. Tolan, So Young Bae

Beyond the β–α–β Fold: Characterization of a SnoaL Domain in the Tautomerase Superfamily

Biochemistry(2025)10.1021/acs.biochem.5c00051

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1 citations

Nemanja Vuksanovic, Maria D. Person, Tzu‐Yu Chen, Wei‐chen Chang, Karen N. Allen +2 more

Selection of nanobodies against liponanoparticle-embedded membrane proteins by yeast surface display

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.20.655075

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2 citations

Hayley Knox, Brian Cho, Barbara Imperiali, Karen N. Allen, Greg J. Dodge

Structural Basis for the Improved RNA Clamping of Amidino-Rocaglates to eIF4A1

ACS Omega(2025)10.1021/acsomega.4c09421

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0DataRank · unranked

0 citations

Lauren E. Brown, James McNeely, Jerry Pelletier, John A. Porco, Karen N. Allen +1 more