🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

David Siegel

Podiatry Institute

ORCID: 0000-0001-7314-4556
Biochemistry, Genetics and Molecular BiologyComputer ScienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 13 papers. Top paper: “No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells”.

No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells

BMC Biology(2021)10.1186/s12915-020-00941-x
N/A
0.464DataRank · unranked
21 citations

David Siegel, Guorui Xie, George C. Hartoularos, Mars Stone, Chun Jimmie Ye +4 more

No detectable alloreactive transcriptional responses during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.12.946509
N/A
0.104DataRank · unranked
1 citations

David Siegel, Guorui Xie, Mars Stone, Zev J. Gartner, Nadia R. Roan +2 more

Massively parallel analysis of human 3′ UTRs reveals that AU-rich element length and registration predict mRNA destabilization

G3 Genes Genomes Genetics(2021)10.1093/g3journal/jkab404
N/A
0DataRank · unranked
63 citations

Olivier Le Tonquèze, Anne Biton, Noah Zaitlen, David J. Erle, David Siegel

Tissue‐specific differences in HIV DNA levels and mechanisms that govern HIV transcription in blood, gut, genital tract and liver in ART‐treated women

Journal of the International AIDS Society(2021)10.1002/jia2.25738
N/A
0DataRank · unranked
29 citations

Guorui Xie, Peggy Kim, David Siegel, Sulggi A. Lee, Joseph K. Wong +7 more

Inflammatory Biomarkers Aid in Diagnosis of Dementia

Frontiers in Aging Neuroscience(2021)10.3389/fnagi.2021.717344
N/A
0DataRank · unranked
36 citations

John C. Adair, Janice E. Knoefel, Arvind Caprihan, Jillian Prestopnik, Jeffrey Thompson +4 more

Host variation in type I interferon signaling genes ( MX1 ), CCR5 Δ 32 , and MHC class I alleles in treated HIV+ non-controllers predict viral reservoir size

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.31.466670
N/A
0DataRank · unranked
2 citations

Cassandra Thanh, Eunice Wan, Rebecca Hoh, Kristen S. Hobbs, Tony Pan +22 more

Host variation in type I interferon signaling genes (MX1), C–C chemokine receptor type 5 gene, and major histocompatibility complex class I alleles in treated HIV+ noncontrollers predict viral reservoir size

AIDS(2022)10.1097/qad.0000000000003428
N/A
0DataRank · unranked
13 citations

Cassandra Thanh, Eunice Wan, Rebecca Hoh, Kristen S. Hobbs, Tony Pan +20 more

Common and Divergent Features of T Cells from Blood, Gut, and Genital Tract of Antiretroviral Therapy–Treated HIV+ Women

The Journal of Immunology(2022)10.4049/jimmunol.2101102
N/A
0DataRank · unranked
5 citations

Sara Morón‐López, David Siegel, Kailin Yin, Anastasia Polos, Jennifer Cohen +6 more

A cohort-based study of host gene expression: tumor suppressor and innate immune/inflammatory pathways associated with the HIV reservoir size

PLoS Pathogens(2023)10.1371/journal.ppat.1011114
N/A
0DataRank · unranked
8 citations

Germán G. Gornalusse, David Siegel, Alton Barbehenn, Cassandra Thanh, Rebecca Hoh +20 more

Differences in expression of tumor suppressor, innate immune, inflammasome, and potassium/gap junction channel host genes significantly predict viral reservoir size during treated HIV infection

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.10.523535
N/A
0DataRank · unranked
2 citations

David Siegel, Cassandra Thanh, Rebecca Hoh, Kristen S. Hobbs, Tony Pan +16 more

Massively Parallel Analysis of Human 3′ UTRs Reveals that AU-Rich Element Length and Registration Predict mRNA Destabilization

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.12.945063
N/A
0DataRank · unranked
10 citations

Olivier Le Tonquèze, Anne Biton, Noah Zaitlen, David J. Erle, David Siegel

Differences in lung cancer death rates by rural vs. urban status in comparison to all-cancer death rates — United States, 1999–2020

Cancer Epidemiology(2025)10.1016/j.canep.2025.102763
N/A
0DataRank · unranked
3 citations

David Siegel, Susan A. Sabatino, Jin Qin, S. Jane Henley, Christine M. Kava

MPRAudit Quantifies the Fraction of Variance Described by Unknown Features in Massively Parallel Reporter Assays

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.12.945113
N/A
0DataRank · unranked
1 citations

Olivier Le Tonquèze, Anne Biton, David J. Erle, Noah Zaitlen, David Siegel