Mary A. Allen

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 16 papers. Top paper: “Nuclear mechanosensing drives chromatin remodelling in persistently activated fibroblasts”.

Nuclear mechanosensing drives chromatin remodelling in persistently activated fibroblasts

Nature Biomedical Engineering(2021)10.1038/s41551-021-00709-w

N/A

3.6DataRank · unranked

172 citations

Claudia Crocini, Daniel Ramirez, Anouk R. Killaars, Joseph C. Grim, Brian A. Aguado +6 more

Extracellular matrix stiffness controls cardiac valve myofibroblast activation through epigenetic remodeling

Bioengineering & Translational Medicine(2022)10.1002/btm2.10394

N/A

0.568DataRank · unranked

43 citations

Dilara Batan, Carrie Bishop, Daniel Ramirez, Brian A. Aguado, Megan E. Schroeder +10 more

Atlas of nascent RNA transcripts reveals tissue-specific enhancer to gene linkages

BMC Genomics(2025)10.1186/s12864-025-11568-z

N/A

0.241DataRank · unranked

4 citations

Lynn Sanford, Zachary L. Maas, Taylor Jones, Jacob T. Stanley, Hope A. Townsend +3 more

Infection of immune competent macrophages expressing functional Slc11a1 alters global gene expression, regulation of metal ions, and infection outcomes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.18.436026

N/A

0.104DataRank · unranked

1 citations

Michael Minson, Mary A. Allen, Robin D. Dowell, Amy E. Palmer, Lara N. Janiszewski

RUN(X) out of blood: emerging RUNX1 functions beyond hematopoiesis and links to Down syndrome

Human Genomics(2023)10.1186/s40246-023-00531-2

N/A

0DataRank · unranked

17 citations

Christopher D. Ozeroff, Mary A. Allen, Esteban J. Rozen

RNA binding by the glucocorticoid receptor attenuates dexamethasone-induced gene activation

Scientific Reports(2023)10.1038/s41598-023-35549-y

N/A

0DataRank · unranked

13 citations

Humza M. Ashraf, Daniella A. Ugay, Sabrina L. Spencer, Mary A. Allen, Robert Batey +2 more

Atlas of nascent RNA transcripts reveals enhancer to gene linkages

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.07.570626

N/A

0DataRank · unranked

8 citations

Lynn Sanford, Zachary L. Maas, Taylor Jones, Jacob T. Stanley, Hope A. Townsend +3 more

Transcription dosage compensation does not occur in Down syndrome

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.07.543933

N/A

0DataRank · unranked

1 citations

Robin D. Dowell, Josephina Hendrix, Justin Freeman, Mary A. Allen, Samuel S. Hunter

Cellular zinc status alters chromatin accessibility and binding of transcription factor p53 to genomic sites

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.20.567954

N/A

0DataRank · unranked

1 citations

Daniel Ocampo, Lynn Sanford, Taylor Jones, Mary A. Allen, Robin D. Dowell +2 more

Quantification of transcriptome changes to investigate the role of glucocorticoid receptor-RNA binding during dexamethasone treatment

BMC Research Notes(2023)10.1186/s13104-023-06446-4

N/A

0DataRank · unranked

0 citations

Mary A. Allen, Robert Batey, Deborah S. Wuttke, Nickolaus C. Lammer

A transcription factor (TF) inference method that broadly measures TF activity and identifies mechanistically distinct TF networks

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.15.585303

N/A

0DataRank · unranked

6 citations

Rutendo F. Sigauke, Lynn Sanford, Dylan J. Taatjes, Mary A. Allen, Robin D. Dowell +1 more

LIET Model: Capturing the kinetics of RNA polymerase from loading to termination

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.03.616401

N/A

0DataRank · unranked

0 citations

G. Barone, Hope A. Townsend, Rutendo F. Sigauke, Mary A. Allen, Robin D. Dowell +1 more

Opposite sex housing enhances reproductive function and induces transcriptional changes in the preoptic area of GnRH-deficient mice

Frontiers in Endocrinology(2025)10.3389/fendo.2025.1571740

N/A

0DataRank · unranked

0 citations

Mary A. Allen, Pei‐San Tsai, Tyler Akonom

Characterization of Global Gene Expression, Regulation of Metal Ions, and Infection Outcomes in Immune-Competent 129S6 Mouse Macrophages

Infection and Immunity(2021)10.1128/iai.00273-21

N/A

0DataRank · unranked

5 citations

Michael Minson, Mary A. Allen, Robin D. Dowell, Amy E. Palmer, Lara N. Janiszewski

Protocol Variations in Run-On Transcription Dataset Preparation Produce Detectable Signatures in Sequencing Libraries

Research Square(2021)10.21203/rs.3.rs-571377/v1

N/A

0DataRank · unranked

0 citations

Rutendo F. Sigauke, Jacob T. Stanley, Mary A. Allen, Robin D. Dowell, Samuel S. Hunter

Protocol variations in run-on transcription dataset preparation produce detectable signatures in sequencing libraries

BMC Genomics(2022)10.1186/s12864-022-08352-8

N/A

0DataRank · unranked

14 citations

Rutendo F. Sigauke, Jacob T. Stanley, Mary A. Allen, Robin D. Dowell, Samuel S. Hunter