🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Xianding Deng

University of California, San Francisco

ORCID: 0000-0001-7648-4652

Also affiliated with Global Viral, Abbott (United States)

MedicineBiochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile
0.165Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Introduction, Transmission Dynamics, and Fate of Early Severe Acute Respiratory Syndrome Coronavirus 2 Lineages in Santa Clara County, California

The Journal of Infectious Diseases(2021)10.1093/infdis/jiab199
Top 70%
0.165DataRank
Top 70%2 citations

Xianding Deng, Carol A. Kemper, Michelle A. Jorden, Brandon Bonin, Sarah L. Rudman +15 more

Papers

Driven by 16 papers — median percentile 30. Top paper: “CRISPR–Cas12-based detection of SARS-CoV-2”.

CRISPR–Cas12-based detection of SARS-CoV-2

Nature Biotechnology(2020)10.1038/s41587-020-0513-4
N/A
17.8DataRank · unranked
2826 citations

Xianding Deng, Guixia Yu, Clare L. Fasching, Venice Servellita, Jasmeet Singh +15 more

Cryptic transmission of SARS-CoV-2 in Washington state

Science(2020)10.1126/science.abc0523
N/A
13.7DataRank · unranked
329 citations

Alexander L. Greninger, Pavitra Roychoudhury, Lea M. Starita, Michael Famulare, Meei‐Li Huang +62 more

Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California

Science(2020)10.1126/science.abb9263
N/A
13.4DataRank · unranked
308 citations

Wei Gu, Scot Federman, Louis du Plessis, Oliver Pybus, Nuno R. Faria +45 more

Rapid pathogen detection by metagenomic next-generation sequencing of infected body fluids

Nature Medicine(2020)10.1038/s41591-020-1105-z
N/A
0.984DataRank · unranked
703 citations

Xianding Deng, Marco Lee, Yasemin Sucu, Shaun Arevalo, Doug Stryke +17 more

Transmission, infectivity, and neutralization of a spike L452R SARS-CoV-2 variant

Cell(2021)10.1016/j.cell.2021.04.025
N/A
0.945DataRank · unranked
542 citations

Miguel Garcia-Knight, Mir M. Khalid, Venice Servellita, Candace Wang, Mary Kate Morris +41 more

Transmission, infectivity, and antibody neutralization of an emerging SARS-CoV-2 variant in California carrying a L452R spike protein mutation

medRxiv(2021)10.1101/2021.03.07.21252647
N/A
0.827DataRank · unranked
247 citations

Miguel Garcia-Knight, Mir M. Khalid, Venice Servellita, Candace Wang, Mary Kate Morris +41 more

Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance

Nature Microbiology(2020)10.1038/s41564-019-0637-9
N/A
0.794DataRank · unranked
198 citations

Asmeeta Achari, Scot Federman, Guixia Yu, Sneha Somasekar, Inês Bártolo +35 more

Genomic epidemiology identifies emergence and rapid transmission of SARS-CoV-2 B.1.1.7 in the United States

medRxiv(2021)10.1101/2021.02.06.21251159
N/A
0.701DataRank · unranked
106 citations

Karthik Gangavarapu, Mark Zeller, Alexandre Bolze, Elizabeth T. Cirulli, Kelly M. Schiabor Barrett +48 more

Cryptic transmission of SARS-CoV-2 in Washington State

medRxiv(2020)10.1101/2020.04.02.20051417
N/A
0.670DataRank · unranked
86 citations

Alexander L. Greninger, Pavitra Roychoudhury, Lea M. Starita, Michael Famulare, Meei‐Li Huang +52 more

Predominance of antibody-resistant SARS-CoV-2 variants in vaccine breakthrough cases from the San Francisco Bay Area, California

Nature Microbiology(2022)10.1038/s41564-021-01041-4
N/A
0.578DataRank · unranked
46 citations

Mary Kate Morris, Alicia Sotomayor-González, Amelia S. Gliwa, Erika Elizabeth Rodríguez‐Torres, Noah Brazer +23 more

A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage

medRxiv(2020)10.1101/2020.03.27.20044925
N/A
0.542DataRank · unranked
36 citations

Wei Gu, Scot Federman, Louis du Plessis, Oliver Pybus, Nuno R. Faria +43 more

Predominance of antibody-resistant SARS-CoV-2 variants in vaccine breakthrough cases from the San Francisco Bay Area, California

medRxiv(2021)10.1101/2021.08.19.21262139
N/A
0.396DataRank · unranked
13 citations

Alicia Sotomayor-González, Amelia S. Gliwa, Erika Elizabeth Rodríguez‐Torres, Noah Brazer, Alicia Y. Zhou +20 more

Associations of Early COVID-19 Cases in San Francisco With Domestic and International Travel

Clinical Infectious Diseases(2020)10.1093/cid/ciaa599
N/A
0.360DataRank · unranked
10 citations

Xianding Deng, Kevin Reyes, Elaine Hsu, Candace Wang, Alicia Sotomayor-González +5 more

Introduction, Transmission Dynamics, and Fate of Early Severe Acute Respiratory Syndrome Coronavirus 2 Lineages in Santa Clara County, California

The Journal of Infectious Diseases(2021)10.1093/infdis/jiab199
Top 70%
0.165DataRank
Top 70%2 citations

Xianding Deng, Carol A. Kemper, Michelle A. Jorden, Brandon Bonin, Sarah L. Rudman +15 more

Timely intervention and control of a novel coronavirus (COVID-19) outbreak at a large skilled nursing facility—San Francisco, California, 2020

Infection Control and Hospital Epidemiology(2020)10.1017/ice.2020.1375
N/A
0DataRank · unranked
20 citations

Irin Blanco, Pauli N. Amornkul, Amie DuBois, Xianding Deng, Patrick K. Moonan +29 more

Rapid Detection of 2019 Novel Coronavirus SARS-CoV-2 Using a CRISPR-based DETECTR Lateral Flow Assay

medRxiv(2020)10.1101/2020.03.06.20032334
N/A
0DataRank · unranked
152 citations

Xianding Deng, Guixia Yu, Clare L. Fasching, Jasmeet Singh, Jessica Streithorst +13 more