🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Yanbin Yin

University of Nebraska–Lincoln

ORCID: 0000-0001-7667-881X

Also affiliated with Georgia Institute of Technology, University of California San Diego

Biochemistry, Genetics and Molecular BiologyEngineeringAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
4.2Author DataRank

Indexed papers

6in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

dbCAN-seq update: CAZyme gene clusters and substrates in microbiomes

Nucleic Acids Research(2022)10.1093/nar/gkac1068
Top 11%
2.0DataRank
Top 11%82 citations

Boyang Hu, Xinpeng Zhang, Qiwei Ge, Yuchen Yan, Jerry Akresi +4 more

Papers

Driven by 16 papers — median percentile 56. Top paper: “dbCAN3: automated carbohydrate-active enzyme and substrate annotation”.

dbCAN3: automated carbohydrate-active enzyme and substrate annotation

Nucleic Acids Research(2023)10.1093/nar/gkad328
N/A
4.0DataRank · unranked
1013 citations

Qiwei Ge, Yuchen Yan, Xinpeng Zhang, Le Huang, Yanbin Yin +1 more

dbCAN-seq update: CAZyme gene clusters and substrates in microbiomes

Nucleic Acids Research(2022)10.1093/nar/gkac1068
Top 11%
2.0DataRank
Top 11%82 citations

Boyang Hu, Xinpeng Zhang, Qiwei Ge, Yuchen Yan, Jerry Akresi +4 more

dbAPIS: a database of anti-prokaryotic immune system genes

Nucleic Acids Research(2023)10.1093/nar/gkad932
Top 15%
1.3DataRank
Top 15%46 citations

Jinfang Zheng, Xinpeng Zhang, Yanbin Yin, Yuchen Yan

Critical assessment of pan-genomic analysis of metagenome-assembled genomes

Briefings in Bioinformatics(2022)10.1093/bib/bbac413
N/A
1.3DataRank · unranked
46 citations

Yanbin Yin, Tang Li

Three de novo assembled wild cacao genomes from the Upper Amazon

Scientific Data(2024)10.1038/s41597-024-03215-1
Top 33%
0.590DataRank
Top 33%18 citations

Jinfang Zheng, Li Tang, Lyndel W. Meinhardt, Bryan A. Bailey, Osman A. Gutiérrez +5 more

CAZyme3D: A Database of 3D Structures for Carbohydrate-active Enzymes

Journal of Molecular Biology(2025)10.1016/j.jmb.2025.169001
Top 54%
0.307DataRank
Top 54%5 citations

Yanbin Yin, N. R. Siva Shanmugam

AcrDB update: Predicted 3D structures of anti‐CRISPRs in human gut viromes

Protein Science(2025)10.1002/pro.70177
N/A
0DataRank · unranked
2 citations

N. R. Siva Shanmugam, Xinpeng Zhang, Revanth Sai Kumar Reddy Patel, Yanbin Yin, Minal Khatri

Mucinolysome in gut microbiomes of farm animals and humans

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.14.682383
N/A
0DataRank · unranked
1 citations

Thi Van Thanh, Zhisong Cui, N. R. Siva Shanmugam, Sarah Moraïs, Itzhak Mizrahi +4 more

dbCAN-HGM: CAZyme gene clusters in gut microbiomes of diverse human populations

Nucleic Acids Research(2025)10.1093/nar/gkaf1185
Top 100%
0DataRank
Top 100%0 citations

Revanth Sai Kumar Reddy Patel, N. R. Siva Shanmugam, Jerry Akresi, Yanbin Yin, Yuchen Yan

Polyphenol Utilization Proteins in the Human Gut Microbiome

Applied and Environmental Microbiology(2021)10.1128/aem.01851-21
N/A
0DataRank · unranked
19 citations

Yinchao He, Pengxiang Zhang, Yi-Xin Huo, Yanbin Yin, Bo Zheng

Near T2T haplotype-resolved genomes of cacao (Theobroma cacao) variety CCN51

Scientific Data(2025)10.1038/s41597-025-06480-w
Top 100%
0DataRank
Top 100%0 citations

Yaxin Lou, Yuchen Yan, Lyndel W. Meinhardt, Bryan A. Bailey, Osman A. Gutiérrez +5 more

Critical assessment of pan-genomics of metagenome-assembled genomes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.13.476228
N/A
0DataRank · unranked
1 citations

Yanbin Yin, Li Tang

AcaFinder: genome mining for anti-CRISPR associated genes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.29.505781
N/A
0DataRank · unranked
1 citations

Jinfang Zheng, Yanbin Yin, Bowen Yang

Genome mining for anti-CRISPR operons using machine learning

Bioinformatics(2023)10.1093/bioinformatics/btad309
N/A
0DataRank · unranked
6 citations

Minal Khatri, Jinfang Zheng, Jitender S. Deogun, Yanbin Yin, Bowen Yang

A Matrix Ensemble Kalman Filter-based Multi-arm Neural Network to Adequately Approximate Deep Neural Networks

arXiv (Cornell University)(2023)10.48550/arxiv.2307.10436
N/A
0DataRank · unranked
0 citations

Yuchen Yan, Yuzhen Zhou, Yanbin Yin, Souparno Ghosh, Ved Piyush

Carbohydrate-active enzyme annotation in microbiomes using dbCAN

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.10.575125
N/A
0DataRank · unranked
7 citations

Le Huang, Haidong Yi, Yuchen Yan, Xinpeng Zhang, Jerry Akresi +2 more