🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Brendan L. O’Connell

Oregon Health & Science University

ORCID: 0000-0001-7757-4561
Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 6%percentile
0.208Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.30.547175
Top 65%
0.208DataRank
Top 65%3 citations

Olga Dudchenko, Juan Antonio Rodríguez, Cynthia Pérez Estrada, Marianne Dehasque, Claudia Fontsere +27 more

Papers

Driven by 13 papers — median percentile 35. Top paper: “Loss of epigenetic information as a cause of mammalian aging”.

Loss of epigenetic information as a cause of mammalian aging

Cell(2023)10.1016/j.cell.2022.12.027
N/A
0.967DataRank · unranked
629 citations

Motoshi Hayano, Patrick Griffin, João A. Amorim, Michael S. Bonkowski, John K. Apostolides +59 more

sciMET-cap: high-throughput single-cell methylation analysis with a reduced sequencing burden

Genome biology(2024)10.1186/s13059-024-03306-7
N/A
0.434DataRank · unranked
13 citations

Ruth V. Nichols, Lauren Rylaarsdam, Brendan L. O’Connell, Theodore P. Braun, Andrew C. Adey +1 more

High-content single-cell combinatorial indexing

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.11.425995
N/A
0.373DataRank · unranked
11 citations

Dmitry Pokholok, Brendan L. O’Connell, Casey Thornton, Fan Zhang, Brian J. O’Roak +6 more

Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.30.547175
Top 65%
0.208DataRank
Top 65%3 citations

Olga Dudchenko, Juan Antonio Rodríguez, Cynthia Pérez Estrada, Marianne Dehasque, Claudia Fontsere +27 more

Atlas-scale single-cell chromatin accessibility using nanowell-based combinatorial indexing

Genome Research(2023)10.1101/gr.276655.122
N/A
0DataRank · unranked
9 citations

Ruth V. Nichols, Dmitry Pokholok, Jerushah Thomas, Sonia N. Acharya, Andrew Nishida +6 more

sciMET-cap: High-throughput single-cell methylation analysis with a reduced sequencing burden

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.12.548718
N/A
0DataRank · unranked
2 citations

Ruth V. Nichols, Lauren Rylaarsdam, Brendan L. O’Connell, Theodore P. Braun, Andrew C. Adey +1 more

Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample

Cell(2024)10.1016/j.cell.2024.06.002
N/A
0DataRank · unranked
45 citations

Olga Dudchenko, Juan Antonio Rodríguez, Cynthia Pérez Estrada, Marianne Dehasque, Claudia Fontsere +51 more

Atlas-scale single-cell DNA methylation profiling with sciMETv3

Cell Genomics(2024)10.1016/j.xgen.2024.100726
N/A
0DataRank · unranked
17 citations

Lauren Rylaarsdam, Brendan L. O’Connell, Zohar Shipony, Nika Iremadze, Sonia N. Acharya +2 more

Cas12a-Capture: a novel, low-cost, and scalable method for targeted sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.18.388876
N/A
0DataRank · unranked
0 citations

Andrew Nishida, Brendan L. O’Connell, Caitlin V. Miller, Sally Grindstaff, Casey Thornton +4 more

Single-cell DNA methylation analysis tool Amethyst resolves distinct non-CG methylation patterns in human astrocytes and oligodendrocytes

Communications Biology(2025)10.1038/s42003-025-08859-2
N/A
0DataRank · unranked
0 citations

Benjamin W. Skubi, Ruth V. Nichols, Brendan L. O’Connell, Jack Henry Kotnik, Stephen Coleman +3 more

Deeply conserved synteny and the evolution of metazoan chromosomes

Science Advances(2022)10.1126/sciadv.abi5884
N/A
0DataRank · unranked
220 citations

Jessen V. Bredeson, Kodiak C. Berkoff, Ferdinand Marlétaz, Therese Mitros, Darrin T. Schultz +8 more

High-throughput robust single-cell DNA methylation profiling with sciMETv2

Nature Communications(2022)10.1038/s41467-022-35374-3
N/A
0DataRank · unranked
66 citations

Brendan L. O’Connell, Ryan M. Mulqueen, Jerushah Thomas, Ashley R. Woodfin, Sonia N. Acharya +5 more

Accessible high-throughput single-cell whole-genome sequencing with paired chromatin accessibility

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100625
N/A
0DataRank · unranked
9 citations

Travis W. Moore, Brendan L. O’Connell, Ruth V. Nichols, John Muschler, Dove Keith +6 more