H. Benjamin Larman

Also affiliated with Johns Hopkins Medicine

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 48 papers. Top paper: “Viral epitope profiling of COVID-19 patients reveals cross-reactivity and correlates of severity”.

Viral epitope profiling of COVID-19 patients reveals cross-reactivity and correlates of severity

Science(2020)10.1126/science.abd4250

N/A

14.5DataRank · unranked

769 citations

Eric Fujimura, Tomasz Kula, Richard T. Timms, I‐Hsiu Lee, Yumei Leng +95 more

Profiling serum antibodies with a pan allergen phage library identifies key wheat allergy epitopes

Nature Communications(2021)10.1038/s41467-020-20622-1

N/A

1.6DataRank · unranked

61 citations

Brandon Sie, Thomas R. Nirschl, Audrey C. Knight, Hugh A. Sampson, Anna Nowak‐Węgrzyn +5 more

Evaluation of Serological SARS-CoV-2 Lateral Flow Assays for Rapid Point-of-Care Testing

Journal of Clinical Microbiology(2020)10.1128/jcm.02020-20

N/A

0.624DataRank · unranked

63 citations

Kathryn R. Martin, Yukari C. Manabe, H Schmidt, Jernelle Miller, Morgan Keruly +17 more

High-throughput discovery of MHC class I- and II-restricted T cell epitopes using synthetic cellular circuits

Nature Biotechnology(2024)10.1038/s41587-024-02248-6

N/A

0.571DataRank · unranked

44 citations

M Dezfulian, Brandon Sie, Charlotte I. Wang, Tomasz Kula, Uri Laserson +3 more

Neutralizing IFNL3 Autoantibodies in Severe COVID-19 Identified Using Molecular Indexing of Proteins by Self-Assembly

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.02.432977

N/A

0.330DataRank · unranked

8 citations

Jonathan Gunn, Puwanat Sangkhapreecha, Daniel R. Monaco, Xuwen Alice Zheng, Hung-Ji Tsai +18 more

Epitope Mapping of SARS-CoV-2 Spike Antibodies in Vaccinated Kidney Transplant Recipients Reveals Poor Spike Coverage Compared to Healthy Controls

The Journal of Infectious Diseases(2023)10.1093/infdis/jiad534

N/A

0.269DataRank · unranked

5 citations

William R. Morgenlander, Trevor S. Johnston, Camille Hage, Andrew Pekosz, Christine M. Durand +9 more

Molecular Display of the Animal Meta-Venome for Discovery of Novel Therapeutic Peptides

Molecular & Cellular Proteomics(2024)10.1016/j.mcpro.2024.100901

N/A

0.208DataRank · unranked

3 citations

Yang Miao, Zixing Liu, Konstantin Schütze, Nathachit Limjunyawong, Daphne Chun-Che Chien +11 more

Remdesivir postexposure prophylaxis limits measles-induced “immune amnesia” and measles antibody responses in macaques

JCI Insight(2025)10.1172/jci.insight.190740

N/A

0.208DataRank · unranked

3 citations

Li‐Ting Liu, William R. Morgenlander, Manjusha Thakar, Nadine Peart Akindele, Jacqueline Brockhurst +11 more

Barcoding intracellular reverse transcription enables high-throughput phenotype-coupled T cell receptor analyses

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100600

N/A

0.165DataRank · unranked

2 citations

Janelle M. Montagne, Thomas R. Nirschl, Emily F. Davis-Marcisak, Jeanette Johnson, Amanda L. Huff +10 more

TGM4: an immunogenic prostate-restricted antigen

Journal for ImmunoTherapy of Cancer(2021)10.1136/jitc-2020-001649

N/A

0DataRank · unranked

27 citations

Aleksandar Obradović, Thomas R. Nirschl, Laura Crowley, Rodney Macedo, Alexandros Papachristodoulou +13 more

HIV Antibody Profiles in HIV Controllers and Persons With Treatment-Induced Viral Suppression

Frontiers in Immunology(2021)10.3389/fimmu.2021.740395

N/A

0DataRank · unranked

14 citations

Athena Chen, Daniel R. Monaco, Sarah E. Hudelson, Wendy Grant‐McAuley, Richard D. Moore +10 more

Author Correction: DeepTCR is a deep learning framework for revealing sequence concepts within T-cell repertoires

Nature Communications(2021)10.1038/s41467-021-22667-2

N/A

0DataRank · unranked

12 citations

H. Benjamin Larman, Drew M. Pardoll, Alexander S. Baras, John-William Sidhom

Loss of TDP-43 function and rimmed vacuoles persist after T cell depletion in a xenograft model of sporadic inclusion body myositis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.09.439185

N/A

0DataRank · unranked

7 citations

Jonathan P. Ling, Kerstin E. Braunstein, Janelle M. Montagne, Jenna M. Kastenschmidt, Andrew D. Wilson +14 more

Prevalence, persistence, and genetics of antibody responses to protein toxins and virulence factors

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.01.462481

N/A

0DataRank · unranked

4 citations

Daniel R. Monaco, Athena Chen, Thiagarajan Venkataraman, Sahana Jayaraman, Cristian Valencia +20 more

Massively parallel DNA target capture using Long Adapter Single Stranded Oligonucleotide (LASSO) probes assembled through a novel DNA recombinase mediated methodology

(2021)10.22541/au.162075978.89906964/v1

N/A

0DataRank · unranked

1 citations

Lamia Chkaiban, H. Benjamin Larman, Jeffrey A. Rosenfeld, Biju Parekkadan, Lorenzo Tosi

Unbiased discovery of autoantibodies associated with severe COVID-19 via genome-scale self-assembled DNA-barcoded protein libraries

Nature Biomedical Engineering(2022)10.1038/s41551-022-00925-y

N/A

0DataRank · unranked

58 citations

Jonathan Gunn, Puwanat Sangkhapreecha, Daniel R. Monaco, Xuwen Alice Zheng, Hung-Ji Tsai +19 more

Phage display of environmental protein toxins and virulence factors reveals the prevalence, persistence, and genetics of antibody responses

Immunity(2022)10.1016/j.immuni.2022.05.002

N/A

0DataRank · unranked

42 citations

Daniel R. Monaco, Athena Chen, Thiagarajan Venkataraman, Sahana Jayaraman, Cristian Valencia +22 more

Coexisting autoantibodies against transcription factor Sp4 are associated with decreased cancer risk in patients with dermatomyositis with anti-TIF1γ autoantibodies

Annals of the Rheumatic Diseases(2022)10.1136/ard-2022-222441

N/A

0DataRank · unranked

39 citations

Brandon Sie, Iago Pinal‐Fernandez, Katherine Pak, Christopher A. Mecoli, María Casal-Domínguez +18 more

PhIP-Seq Reveals Autoantibodies for Ubiquitously Expressed Antigens in Viral Myocarditis

Biology(2022)10.3390/biology11071055

N/A

0DataRank · unranked

20 citations

Ninaad Lasrado, Erika Petro-Turnquist, Eric A. Weaver, Thiagarajan Venkataraman, Daniel R. Anderson +4 more

Evaluation of multi-assay algorithms for cross-sectional HIV incidence estimation in settings with universal antiretroviral treatment

BMC Infectious Diseases(2022)10.1186/s12879-022-07850-0

N/A

0DataRank · unranked

3 citations

Oliver Laeyendecker, Daniel R. Monaco, Athena Chen, Sarah E. Hudelson, Ethan Klock +16 more

Greater breadth of vaccine-induced immunity in females than males is mediated by increased antibody diversity in germinal center B cells

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.31.494237

N/A

0DataRank · unranked

2 citations

Santosh Dhakal, Hsuan Liu, Sahana Jayaraman, Han-Sol Park, Harrison Powell +13 more

Coexisting autoantibodies against transcription factor Sp4 are associated with decreased cancer risk in dermatomyositis patients with anti-TIF1γ autoantibodies

medRxiv(2022)10.1101/2022.02.28.22271555

N/A

0DataRank · unranked

0 citations

Brandon Sie, Iago Pinal‐Fernandez, Katherine Pak, Christopher A. Mecoli, María Casal-Domínguez +14 more

Transplantation Elicits a Clonally Diverse CD8 + T Cell Response that is Comprised of Potent CD43 + Effectors

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.21.492934

N/A

0DataRank · unranked

0 citations

Melissa A. Kallarakal, Sahana Jayaraman, Francis I. Ibukun, Katherine P. Tong, Linda D. Orzolek +3 more

A robust pipeline for high-content, high-throughput immunophenotyping reveals age- and genetics-dependent changes in blood leukocytes

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100619

N/A

0DataRank · unranked

14 citations

Sofie Van Gassen, Margaret H. Beddall, Reid Ballard, Yaser Iftikhar, Renguang Du +9 more

Transplantation elicits a clonally diverse CD8+ T cell response that is comprised of potent CD43+ effectors

Cell Reports(2023)10.1016/j.celrep.2023.112993

N/A

0DataRank · unranked

11 citations

Melissa A. Kallarakal, Sahana Jayaraman, Francis I. Ibukun, Katherine P. Tong, Linda D. Orzolek +3 more

Comprehensive profiling of pre-infection antibodies identifies HIV targets associated with viremic control and viral load

Frontiers in Immunology(2023)10.3389/fimmu.2023.1178520

N/A

0DataRank · unranked

3 citations

William R. Morgenlander, Sarah E. Hudelson, Manjusha Thakar, Estelle Piwowar‐Manning, William Clarke +18 more

Efficient encoding of large antigenic spaces by epitope prioritization with Dolphyn

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.30.551179

N/A

0DataRank · unranked

0 citations

Thiagarajan Venkataraman, William R. Morgenlander, Miso Na, Tomasz Kula, Kathleen Waugh +9 more

Precision arbovirus serology with a pan-arbovirus peptidome

Nature Communications(2024)10.1038/s41467-024-49461-0

N/A

0DataRank · unranked

16 citations

Wan Ni Chia, Beatriz Parra, Daniel R. Monaco, Izabela Ragan, Carlos A. Pardo +9 more

Comprehensive Enteroviral Serology Links Infection and Anti‐Melanoma Differentiation‐Associated Protein 5 Dermatomyositis

ACR Open Rheumatology(2024)10.1002/acr2.11752

N/A

0DataRank · unranked

7 citations

Eleni Tiniakou, William R. Morgenlander, Miso Na, Lisa Christopher‐Stine, H. Benjamin Larman +1 more

Efficient encoding of large antigenic spaces by epitope prioritization with Dolphyn

Nature Communications(2024)10.1038/s41467-024-45601-8

N/A

0DataRank · unranked

9 citations

Thiagarajan Venkataraman, William R. Morgenlander, Miso Na, Tomasz Kula, Kathleen Waugh +9 more

Identification of antibody targets associated with lower HIV viral load and viremic control

PLoS ONE(2024)10.1371/journal.pone.0305976

N/A

0DataRank · unranked

1 citations

William R. Morgenlander, Ingo Ruczinski, Kai Kammers, Oliver Laeyendecker, Sarah E. Hudelson +17 more

Molecular Display of the Animal Meta-Venome for Discovery of Novel Therapeutic Peptides

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.27.595990

N/A

0DataRank · unranked

0 citations

Yang Miao, Zixing Liu, Konstantin Schütze, Nathachit Limjunyawong, Daphne Chun-Che Chien +11 more

Maternal exposure to per- and polyfluoroalkyl substances and epitope level antibody response to vaccines against measles and rubella in children from the Boston birth cohort

Environment International(2025)10.1016/j.envint.2025.109433

N/A

0DataRank · unranked

10 citations

William R. Morgenlander, Kari C. Nadeau, Guoying Wang, Pamela A Frischmeyer-Guerrerio, Colleen Pearson +5 more

Proviruses in CD4 + T cells reactive to autologous antigens contribute to nonsuppressible HIV-1 viremia

Science Translational Medicine(2025)10.1126/scitranslmed.adu4643

N/A

0DataRank · unranked

7 citations

Milica Moskovljevic, Filippo Dragoni, Sahana Jayaraman, Nathan L. Board, Angelica Camilo-Contreras +18 more

Characterizing local antibody responses in the muscle of inclusion body myositis patients

Journal of Autoimmunity(2025)10.1016/j.jaut.2025.103437

N/A

0DataRank · unranked

4 citations

Andrew Wilson, Xuwen Alice Zheng, Janelle M. Montagne, Iago Pinal‐Fernandez, Andrew L. Mammen +3 more

Myositis-specific autoantibodies recognising Mi2 also target the AIRE protein at a shared PHD zinc finger

Annals of the Rheumatic Diseases(2025)10.1016/j.ard.2025.08.023

N/A

0DataRank · unranked

2 citations

Sahana Jayaraman, Katherine Pak, Iago Pinal‐Fernandez, Sandra Muñoz-Braceras, María Casal-Domínguez +12 more

Specific viral antibodies associate with anti-NMDAR encephalitis after herpes simplex encephalitis

Brain Behavior and Immunity(2025)10.1016/j.bbi.2025.106073

N/A

0DataRank · unranked

1 citations

William R. Morgenlander, Manjusha Thakar, Poul M Schulte-Frankenfeld, Sarah Schott, Isabel Bünger +20 more

Proviruses in CD4 + T cells reactive to autologous antigens contribute to nonsuppressible HIV-1 viremia

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.19.649587

N/A

0DataRank · unranked

2 citations

Milica Moskovljevic, Filippo Dragoni, Sahana Jayaraman, Nathan L. Board, Angelica Camilo-Contreras +18 more

Myositis-specific autoantibodies recognizing Mi2 also target the autoimmune regulator (AIRE) protein at a shared PHD-zinc finger

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.15.633218

N/A

0DataRank · unranked

1 citations

Sahana Jayaraman, Katherine Pak, Iago Pinal‐Fernandez, Sandra Muñoz-Braceras, María Casal-Domínguez +12 more

Transplacental Antimicrobial Antibodies and Childhood Asthma: Maternal Nativity as an Upstream Factor

Allergy(2025)10.1111/all.70167

N/A

0DataRank · unranked

0 citations

Kari C. Nadeau, Pamela A. Frischmeyer‐Guerrerio, Guoying Wang, August Jernbom Falk, Shuai Li +10 more

COVID-19 Serology at Population Scale: SARS-CoV-2-Specific Antibody Responses in Saliva

Journal of Clinical Microbiology(2020)10.1128/jcm.02204-20

N/A

0DataRank · unranked

260 citations

Pranay R. Randad, Kate Kruczynski, Yukari C. Manabe, David L. Thomas, Andrew Pekosz +16 more

Ultra-efficient sequencing of T Cell receptor repertoires reveals shared responses in muscle from patients with Myositis

EBioMedicine(2020)10.1016/j.ebiom.2020.102972

N/A

0DataRank · unranked

20 citations

Xuwen Alice Zheng, Iago Pinal‐Fernandez, José C. Milisenda, Lisa Christopher‐Stine, Thomas E. Lloyd +3 more

SARS-CoV-2 antibody signatures robustly predict diverse antiviral functions relevant for convalescent plasma therapy

medRxiv(2020)10.1101/2020.09.16.20196154

N/A

0DataRank · unranked

33 citations

Andrew R. Crowley, Savannah E. Butler, Shiwei Xu, Joshua A. Weiner, Evan M. Bloch +17 more

Antibody responses to endemic coronaviruses modulate COVID-19 convalescent plasma functionality

medRxiv(2020)10.1101/2020.12.16.20248294

N/A

0DataRank · unranked

17 citations

Stephanie N. Henson, Daniel R. Monaco, Athena Chen, Kirsten Littlefield, Evan M. Bloch +24 more

DeepTCR is a deep learning framework for revealing sequence concepts within T-cell repertoires

Nature Communications(2021)10.1038/s41467-021-21879-w

N/A

0DataRank · unranked

295 citations

H. Benjamin Larman, Drew M. Pardoll, Alexander S. Baras, John-William Sidhom

Antibody responses to endemic coronaviruses modulate COVID-19 convalescent plasma functionality

Journal of Clinical Investigation(2021)10.1172/jci146927

N/A

0DataRank · unranked

87 citations

Stephanie N. Henson, Daniel R. Monaco, Athena Chen, Kirsten Littlefield, Evan M. Bloch +24 more

Markers of Polyfunctional SARS-CoV-2 Antibodies in Convalescent Plasma

mBio(2021)10.1128/mbio.00765-21

N/A

0DataRank · unranked

83 citations

Andrew R. Crowley, Savannah E. Butler, Shiwei Xu, Joshua A. Weiner, Evan M. Bloch +17 more

Deconvoluting virome-wide antibody epitope reactivity profiles

EBioMedicine(2021)10.1016/j.ebiom.2021.103747

N/A

0DataRank · unranked

40 citations

Sanjay Kottapalli, Florian P. Breitwieser, Danielle E. Anderson, Limin Wijaya, Kevin Tan +11 more